Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13802
- Subject:
- NR_047679.1
- Aligned Length:
- 2967
- Identities:
- 708
- Gaps:
- 2229
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TAGCAGCCCTCTCCCCGCTGCCCTGTCCTGGCCGAGGCAAAGGCCGCGTGCGCTCCGCGTCTGCCAGGCTTTAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGCTGCGCGGACACTGGGTGGGTGGTGGGCCGAGGCGACCGGAAGGTCCTGGCCGCCTTTCCGGTCTCCTCAGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ACCCTGGAGCGCCGCCCTCGGGTTTCGGTCTCCTGGATCTGCGGGTCGGTCTCGGCGGGCGGATTACTCCTCGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCACAACCTCGAGGCCCCGGGGTCAACCGCGCCCTCCGGGCCGGCAACCCAGGGTTTAGTCAGATTCCTCCTGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCCACCGCTTCTGGGAAAGAGGCGCCTCCCGTCAGGAGGATGCTGAGTTCCTCATGACTGGACCAGTGAGTGTC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CACTCCCTGGTCCCTGGCGAGAGAGGCGGGACCCCCACGCCCTCCTGGCGCTCTTTGCAGAGATGTTCCTCAGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCCAATCCGGGATTTGGGATGTCTGTGCGTGCTGTGGAGCAGAGAGTTTGCAACATGGTCTCACTTTGTCACCC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGGCTGGAATGCATTGGCATGAACACGTCTCACTGCAGCCTCAACCTCCCAGGCTGAAGTGACCCTCCAACTCT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GCTTTCACAGTAGCTGTGATATGGTTTGGCTGTGTCCCCACCCACATCTCATCTTAAAACCCAGTGGGAGGAGG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GATGTTCTCCCTTGGAACCAGGCCACCATTCTATGAGGAAGCCAAGCAGCCACATGAAAAGGCCGTATGTAGAC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ATTCTAACTGACAATACTAGCTAAGGTTCCAGCTACTCACCAGCATCAACTATCAGACAAATTCCTATCATTAA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TAGAAGAAACTATATGCCAAGTGACAGCCAGTGAAGCAGAACAACAGGAGAAGACGGCGAAGCCAGAAGCAAAT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TATTTCAATGGAAGAAAAATCCCCTCTCCAGGTTGTTTTCATTGAAAAGAGAGAAGAATCAAATAGACGCAATA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AAAAATGATAAAGGGGATATCACCACCAATCCCACAGAAATACAAACTATCATCAGAGAATACTACAAACGCCT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CTACGCAAAGAAACTAGAAAATCTAGAAGAAATGGTTAAATTCCTCGACACATACACCCTCCCAAGACTAAACC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AGGAAGAAGTTGACTCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATTAATAGCTTACCAACC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATCCTGA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 ATCCTCAATAAAATACTGGCAAACCAAATCCAGCAGCACATCAAAAAGCTTATCCACCATGACCAAGTGGGCTT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CATTCCTGGGATGTAAGGCTGGTTCAATATATGCAAATCAATAAATGTAATCCAGCATATAAACAGAACCAAAG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 ACAAAAACCACATGATTATCTCAATAGATGCAGAAAAGGCCTTTGACAAAATTCGACAACCCTTCATGCTAAAA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 ACTTTCAATAAATTAGGTATTGATGGGACGTATCTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAAGGATGCCTTCTCTCAC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CACTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATTAGGCAGGAGAAGGAAATAAAGGGTATTCAA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TTAGGAAGAGGAAGTCAAATTGTCCCTGTTTGCAGATCACATGATTGTATATCTAGAAAACCCCATTGTCTCAG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GCATTCTTATACACCAATAACAGACAAACAGAGAGCCAAATCATGAGTGAACTCCCATTCACAGTTGCTTCAAA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCGTCAAGGAGAACTACAAACCACTGC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TCAATGAAATAAAAGAGGATACAAACAAATGGAAGAATATTCCATGCTCATGGGTAGGAAGAATCAATATCATG 2220
Query 1 ---ATGGCCATACTGCCCAAGGTAATTTATAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCAC 71
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.
Sbjct 2221 AAAATGGCCATACTGCCCAAGGTAATTTATAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCAT 2294
Query 72 AGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCTGCATCACCAAGTCAATCCTAAGGC 145
|||||||||||||||||||||||||||||||||||||||||||||||||.||||..||||||||||||.|||.|
Sbjct 2295 AGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCCAAGCC 2368
Query 146 AAAAGAAAAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACACGGCTACAGTAACCAAAACAGCA 219
|||||||.|||||||||||||||||..||||||||||||||||||||||||.|||||||||||||||.||||.|
Sbjct 2369 AAAAGAACAAAGCTGGAGGCATCACGGTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAGACAGTA 2442
Query 220 TGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTA 293
|||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||.||||||||||||
Sbjct 2443 TGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCGGAAATAACGCCGCATATCTA 2516
Query 294 CAACTATCTGATCTTTGACAAACCTGACAAAAACAAGCAATGGGGAAAGGATTCCCTATCTAATAAATGGTGCT 367
|||||.|||||||||||||||||||||.|||||||||||||||||||||||||||||||.||||||||||||||
Sbjct 2517 CAACTGTCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCT 2590
Query 368 GGGAAAACTGGCTAGCCATATGTAAAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATTAATTCA 441
||||||||||||||||||||||||.|||||||||||||||||..||||||||||||||.|||||||||||||||
Sbjct 2591 GGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCATTTCCTTACACCTTACACAAAAATTAATTCA 2664
Query 442 AGGTGGATTAAAGACTTAAACATTAGACCTAAAACCATAAAAACCCTAGAAGAAAACCTTGGCATTACCATTCA 515
||.||||||||||||||||||.|||||||||||||||||||||||||||||||||||||.||||||||||||||
Sbjct 2665 AGATGGATTAAAGACTTAAACGTTAGACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCA 2738
Query 516 GGACATAGGAATGGGCAAGCACTTCATGTCTAAAACACCAAAAGCAATGGCAACAAAAGCCAAAATTGACAAAT 589
|||||||||.|||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2739 GGACATAGGCATGGGCAAGGACTTCATGTCTAAAACACCAAAAGCAATGGCAACAAAAGCCAAAATTGACAAAT 2812
Query 590 GGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAGAA 663
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||
Sbjct 2813 GGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAAAA 2886
Query 664 TGGGAGAAAATTTTCACAACCTACTCATCTGACAAAGGGCTAATATCCAGAATTTACAATGAACTCAAACAAAT 737
||||||||||||||..|||||||||||||||||||||||||||||||||||||.||||||||||||||||||||
Sbjct 2887 TGGGAGAAAATTTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAAT 2960
Query 738 T------ 738
|
Sbjct 2961 TTACAAG 2967
