Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13802
- Subject:
- NR_110133.1
- Aligned Length:
- 2254
- Identities:
- 693
- Gaps:
- 1516
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGATGTGTGGAGCTTACGGAATGTGGAGCCCATTTATTTTGCATGCACATTTAATGTGAAAAATTATTTTTAAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTCTAAAGCAACCTCTCGGAAATGCTAAGAACTGCAAAGCTACGCAGACCCTGATGCATTCCTAAATATAATGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGAAAAAACAGAAATGCACCAAGAATTGAAAACCCTGGTTACTCACGATTCTTTTCACCTTTCCACCTTGACCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGCTTTCGTTCTGTCCGAGACACCCACAGGAGAAGTTATCTCAGCCATCGAGAGCAGCAGCATCAGTAACAGCA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CAGCCATGCCAGACTCAGCAATTCTGCTCTTAGAAGTTTTACCCAAGAGAAAAGGAAAACACATGCCCACATGA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGAGTGTTTATATCAGCTTTATTCATAATCACCTCCACCTGGTAACAACCAATTGTCCACCGAATGAGACAAAG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TCTAGCTCTGTTGCCCAGACTGGACTACAGTGGTGTGATTATAGCTCACATCCTCACATCAGACTTGCACTCCT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGACTCAAGCAATCCTTCTGCCTCAGCCTAAAGAGTAGCTGGCTACAGGTGTGCACCACCAGACCCACCTAATT 592
Query 1 -----------------------------------------------ATGGCCATACTGCCCAAGGTAATTTAT 27
.||||||||||||||||||||||||||
Sbjct 593 AAAACAAGGTTCCATGTTCATGGGTAGGAAGAATCAGTATCGTGAAATTGGCCATACTGCCCAAGGTAATTTAT 666
Query 28 AGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCAT 101
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCAT 740
Query 102 ATGGAACCAAAAAAGAGCCTGCATCACCAAGTCAATCCTAAGGCAAAAGAAAAAAGCTGGAGGCATCACACTAC 175
.||||.|||||||||||||..|||..|||||.|||.||||||.||||||||.|||||||||||||||||.|||.
Sbjct 741 GTGGATCCAAAAAAGAGCCCACATTGCCAAGACAACCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACGCTAT 814
Query 176 CTGACTTCAAACTATACTACACGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGAT 249
|||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||.
Sbjct 815 CTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGAC 888
Query 250 CAATGGAACAGAACAGAGCCCTCAGAAA-TAATGCCGCATATCTACAACTATCTGATCTTTGACAAAC------ 316
|||||||||||||||||||.|||||||| ||||.|.|||.|||||||||.|||||||||||||.||||
Sbjct 889 CAATGGAACAGAACAGAGCTCTCAGAAATTAATACTGCACATCTACAACCATCTGATCTTTGAAAAACAACCAT 962
Query 317 -------CTGACAAAAACAAGCAATGGGGAAAGGATTCCCTATCTAATAAATGGTGCTGGGAAAACTGGCTAGC 383
.|||||||||||||.|.|||||||||||||||||||.||||||||.|||||||||||||||||||||
Sbjct 963 CTGATCTTTGACAAAAACAAGAACTGGGGAAAGGATTCCCTATTTAATAAATCGTGCTGGGAAAACTGGCTAGC 1036
Query 384 CATATGTAAAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATTAATTCAAGGTGGATTAAAGACT 457
||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||.||.||||||||||
Sbjct 1037 CATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATTAATTCAAGATGCATTAAAGACT 1110
Query 458 TAAACATTAGACCTAAAACCATAAAAACCCTAGAAGAAAACCTTGGCATTACCATTCAGGACATAGGAATGGGC 531
||||..|||||||||||||.|||||||||||||||||||||||.||||.|||.||||||||||||||.||||||
Sbjct 1111 TAAATGTTAGACCTAAAACAATAAAAACCCTAGAAGAAAACCTAGGCAATACTATTCAGGACATAGGCATGGGC 1184
Query 532 AAGCACTTCATGTCTAAAACACCAAAAGCAATGGCAACAAAAGCCAAAATTGACAAATGGGATCTAATTAAACT 605
|||.||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||.|||||||
Sbjct 1185 AAGGACTTCATGTCTAAAACACCAAAAGCAATGGCAGCAAAAGCCAAAATTGACAAATGGGATCTATTTAAACT 1258
Query 606 AAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAGAATGGGAGAAAATTTTCA 679
|||||||||||||||||||||||||||||.|||||||.||||||||||||||||||||||||||||||||||..
Sbjct 1259 AAAGAGCTTCTGCACAGCAAAAGAAACTATCATCAGAATGAACAGGCAACCTACAGAATGGGAGAAAATTTTTG 1332
Query 680 CAACCTACTCATCTGACAAAGGGCTAATATCCAGAATTTACAATGAACTCAAACAAATT--------------- 738
|||.|||||||||||||||||||||||||||||||||||||||.|||||||||||||||
Sbjct 1333 CAATCTACTCATCTGACAAAGGGCTAATATCCAGAATTTACAAAGAACTCAAACAAATTCACAAGAAAAAAGTA 1406
Query 739 -------------------------------------------------------------------------- 738
Sbjct 1407 AACAACACCTTCAAAAAGTGGGTGAAGGATATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAACAG 1480
Query 739 -------------------------------------------------------------------------- 738
Sbjct 1481 ACACATGAAAAAATGCTCAACATCACTGGCCATCAGAGAAATGCAAATCAAAACCACAATGAGATACCATCTCA 1554
Query 739 -------------------------------------------------------------------------- 738
Sbjct 1555 CACCAGTTAGAATGGCGATCATTAAAAAGTCAGGAAACAGTGCCGGAGAGGATGTGGAGAAATAGGAACACTTT 1628
Query 739 -------------------------------------------------------------------------- 738
Sbjct 1629 TACACTGTTGGTGGGACTGTAAACTAATTCAACCATTGTGGAAGACAGTGTGGCGATTCCTCAAGGATCTAGAT 1702
Query 739 -------------------------------------------------------------------------- 738
Sbjct 1703 CTATTAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGATTAGAAATCATGCTGCTGTAA 1776
Query 739 -------------------------------------------------------------------------- 738
Sbjct 1777 AGACACATGCACACGTATGTTTATTGTGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAT 1850
Query 739 -------------------------------------------------------------------------- 738
Sbjct 1851 CAATGATAGACTGGATTAAAAAAATATGGCACATATACACCATGGAATACTATGTAGCCATAAAAAATGATGAG 1924
Query 739 -------------------------------------------------------------------------- 738
Sbjct 1925 TTCATATCCTTTGTAGGGACATGGATGAAGCTGGAAACCATCATTCTCAGCAAACTATCGCAAGGACAAAAAAC 1998
Query 739 -------------------------------------------------------------------------- 738
Sbjct 1999 CAAACACCGCATGTTCTCACTCATAGGTGGGAATTGAACAATGAGAACACTTGGACACAGGAAGGGGAACATCA 2072
Query 739 -------------------------------------------------------------------------- 738
Sbjct 2073 CATACCAGGGCCTGTCGTGGGGTTGGGGGAGGAGGGAGGGATAGCATTAGGAAATATACCTAATATAAATGACC 2146
Query 739 -------------------------------------------------------------------------- 738
Sbjct 2147 AATTAATGGGTGCAGCACACCAACATGACACATGTATACATATGTAACAAACCTGCACGTTGTGCACATGTACC 2220
Query 739 ---------------------------------- 738
Sbjct 2221 CTAGAACTTAAAGTATAATAAAAAATAAATAAAT 2254
