Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13802
- Subject:
- NR_110665.1
- Aligned Length:
- 2103
- Identities:
- 644
- Gaps:
- 1368
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GACGAAACACTGGAACTCTCCAGAATAAATTGGTACCTGGGTCTCTTCTGAAGTGAGCTGCTCTTAGGAGCTTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AAATGAGGGTCTTTGAAGCCACATGAAAATTGATGAGTGGTTGTAACATCCAAGCTACCAAATCAGACACACTT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GTAATTGTTCCCAATAGTTTCTTAGCAGGCATTTTGGAGGAAAAGATTTGGATCAGAAATTCAGAAATTACCTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGCTCACAAATATATGCCCCTCCAGCACCATCCTGCATTCTGCTTCCAAGATACATGAGCTTTCTGAAGAGCTG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GTGAGAATGCTGAAACTTCCTGGCCTTGGTTTCCCATCTGGTAAAATGAGGAAGACCAAAGCTTAACTCTCACA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGGAATATGCAGATGAGGAAACCGAAGCTCTTGGGGTAACACGACTTGTGAAACTGCATGCTACTCCTCAGTGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CAGGGTGGGGACTCTGGACAGAGGAACTGGCAAGGTCTTCTAGACCTTTGACGTGCATAAACTGGCAGGTTTAC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGAATAACGAGGAAAACAAAGTGAAACAAAAGACTGTACCCGTGTGCTAAGAATTTATTACCCGCACATCAAAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AACTTATCCATCACGATCAAGCTGGCTTCATCCCTGGGATGCAAAGCTGGCTCAGCATATGCAAATCAATAAAC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ATAATCCGTCACATAAACAGAACCAAAGACAAAAACCACATGGTTATCTCAGTAGATGCAGAAAAGGCCTTTGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TAAAATTCAACATCCCTTCATGTTAAAAACTCAATAAACTAGATATTGATGGAACATATCTCAAAATAAAAGAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CTGTTTATGACAAACCCACAGCCAATATCATATTGAATGGGCAAAAGCTGGAAGCATTCCCTTTGAATACTAGT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ACAAGGTAAGGATGCCCTCTTCTCACCACTCTATTCAACATAGTATTGAAGTTTTGGCCAGGGCAATCGGGCAA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GAGAAAGACAAAAAGCATATTCTAATAGGAAGAGAGAGAGTCAAATTGTCTCTATTTGCAGACAACATGATTGT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ATATTTAGAAAACCCCATCATCTCACCCCAAAAACTCCTTAAGCTGGTGAGCAACTTCAGCAAAGTCTCAGGAT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ACAAAATCAATGTGCTAAAATCACAAGCATTCCTTTACACCAACAATAGACAAGCAGGGAGCCAAATCATGAAT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GAAGTCCCATTCACAATTGCTACAAAGAGAATAAAATACCTAGGAATACAGCTAACAAGGGATGTGAAGGACCT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TTTCAAGGAGAACTACAAACTACTGCTCAAGGAAATAAGAGAGGACACAAACAAATGGAAAAACATTCCATCCT 1332
Query 1 -----------------------------ATGGCCATACTGCCCAAGGTAATTTATAGATTCAATGCCATCCCC 45
||||||||||||.||||.||||||||||||||||||||.||||.|
Sbjct 1333 CATGGATAGGAAGAATCAATATCATGAAAATGGCCATACTGTCCAACGTAATTTATAGATTCAATGCTATCCTC 1406
Query 46 ATCAAGCTACCAATGACTTTCTTCACAGAATTGG--AAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGA 117
||||||||||||.||||.||||||||||||||.| ||||||||||||||||.|||||||||||.||||.||||
Sbjct 1407 ATCAAGCTACCATTGACGTTCTTCACAGAATTAGAAAAAAAACTACTTTAAATTTCATATGGAATCAAAGAAGA 1480
Query 118 GCCTGCATCACCAAGTCAATCCTAAGGCAAAAGAAAAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATA 191
.||||.||..|.|||.|||.||||||..|||||||.||||||||||||||||..||||||||||||||||||||
Sbjct 1481 CCCTGTATAGCTAAGACAAGCCTAAGCAAAAAGAACAAAGCTGGAGGCATCAAGCTACCTGACTTCAAACTATA 1554
Query 192 CTACACGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAG 265
||||| |||||||||||||||||||||||||||||||||||||||||.|.|||||||.||||||||||||||||
Sbjct 1555 CTACA-GGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAAACATATAGACCAATGGAACAGAACAG 1627
Query 266 AGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGACAAAAACAAGCAATGGGGA 339
||.||||||||||||..||.||.|||||.|||.|||||||||||||||||||||||||||||||||.||.||||
Sbjct 1628 AGACCTCAGAAATAACACCACACATCTAAAACCATCTGATCTTTGACAAACCTGACAAAAACAAGCGATCGGGA 1701
Query 340 AAGGATTCCCTATCTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAAAAAGCTGAAACTGGAT--CCC 411
||.|||..|||||..|.||||||.|.||||||||||||.|||||||..||.|.|||.|||||||||||| |||
Sbjct 1702 AATGATCTCCTATTCATTAAATGTTTCTGGGAAAACTGTCTAGCCACGTGCAGAAAACTGAAACTGGATCACCC 1775
Query 412 TTCCTTACACCTTATACAAAAATTAATTCAAGGTGGATTAAAGACTTAAACATTAGACCTAAAACCATAAAAAC 485
|||||||.||||||||||||||||||.|.|.|.|||||||||||||||||..|.|..||..|||||||||||||
Sbjct 1776 TTCCTTATACCTTATACAAAAATTAACTTAGGATGGATTAAAGACTTAAATGTAAAGCCCCAAACCATAAAAAC 1849
Query 486 CCTAGAAGAAAACCTTGGCATTACCATTCAGGACATAGGAATGGGCAAGCACTTCATGTCTAAAACACCAAAAG 559
|||||||||||||||.||||.||||||||||||||||||.||||||||..|||||||....|||||.|||||||
Sbjct 1850 CCTAGAAGAAAACCTAGGCAATACCATTCAGGACATAGGCATGGGCAAAGACTTCATAATGAAAACGCCAAAAG 1923
Query 560 CAATGGCAACAAAAGCCAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACT 633
||||.|||.|||||||||.||||||||||||||||.|||||||||||||||||||||||||||||||||||.||
Sbjct 1924 CAATTGCAGCAAAAGCCATAATTGACAAATGGGATGTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAGCT 1997
Query 634 ACCATCAGAGTGAACAGGCAACCTACAGAATGGGAGAAAATTTTCACAACCTACTCATCTGACAAAGGGCTAAT 707
|.||||||||||||||||||||||||||||||||||||||.|||..|.|.|||..||||..|||||||.|||||
Sbjct 1998 ATCATCAGAGTGAACAGGCAACCTACAGAATGGGAGAAAAATTTTGCGATCTATCCATCCAACAAAGGTCTAAT 2071
Query 708 ATCCAGAATTTACAATGAACTCAAACAAATT 738
||||||.||.||.||.|||||.|||||||
Sbjct 2072 ATCCAGCATCTATAAGGAACTTAAACAAA-- 2100
