Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13802
- Subject:
- NR_125368.1
- Aligned Length:
- 2892
- Identities:
- 668
- Gaps:
- 2183
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACTGCAGCTGGGCAGGCACACTCCTCGCAGACCCGGCGCTCTCCAAGGAGAAAAGAAAGTTAGTGGGCTTGGGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TACTATGGCAGAAATGGCCAGGGAAGGGTTTATCTAACCACCAGGAGTACGCAAAGAAGAGAGGTCCAGCCAGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTGCCTCTCAGATTGTTAAGATGCCAGGTGTCTTTTGGCTCATGGAAACAGCTGTTCTGCCCCCTCCCGAACCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TAGACTCACAGCTACACTCTATGGGGAAAGGACAAAGGGAAGGCTGCTTCCTGAAGAGATCTCCATATGGAAGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCTGCAGATCACAAACAACCCACACAGCCATTGTAACGCCTGCTTGCCTGGTCACTTGTGTTTCTGAGAAGCCA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TAACTCCAAGAATAGCGAAGGGAAGAAAATGCCAAAAAGCAGGGGCTGCCTAACAGGTCTGACTTGCAAGGCAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ACTCCTGGCAGGCCTGGCCAGCTTCTGCTTGTCCCAGTGCAATCCCACCCCCATAGGATCTGGAATTTTTCAGT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CCCTTTGCTAAGATTCCTGAAATAGACTTAATGAAGAGCCTCAGAAGTGAAAATTCCTCTTCACACATTTGCTC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AAGAAGATTGCTTTTCTCCTAACACAGAAATCAGCTGCCTTGAGGATGTGCAAGTTTGATTAGGGAGTCTGCTC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TTGCCTATTTCTCAAACGGTTCAGGCCCTGACAGAATCAGTGTCACCCCTAAGGTATTTGCTTCAAATGCCCCC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CATATAATCAAAACTTATAAATGATAAACCAAAAGTTGAGGTACACTCATTGCCTTTCAGAATGAAACCTTCCA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AGGGGCCATGATCATATTGTGACTGGACAAGAACTATCATGGATGAGGCACATCATCTTTTGGAACCATCTATG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GAACAGATATTATTATTCCATTTTGCGGAAGAGGAATCTGAGGCTCAGGCCAGACAGATGCAGCTAACGTTGAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TGGCATCCTGATGATCACCTTCATCACAAAAGGAAGGAGTGCTCTGAGGACTGTAGGTGGCTCTCAGAACCCTG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ACCTCCACGGCAGCCATCAAGGAGTGGCAAAGGGGGTCCACAGTGGCATATGCAGTGAGATCCAAGTTTTAGGC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ATTCGGAGTAGAGCAAGCCACGAATGAGAACAGGTTCTGAAAGTGACAGAAAAGGAGTCACTTTTTTGGTTCCA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TATGAACTTTAAGGTAGTTTTTTCCCAGTTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAAT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CTATAAATTACCTTGGACAGTATGGCCATTTTCATGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CCATTTGTTTGTATCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTATCCTTGAAGAGGTTCTTCACATCCC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACTCATGATTTGGCTC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TCTGTTTGTCTGTTGTTAGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACAATGGGGTTTTCTAGATATACAATCATGTCATCTG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTGTCCTGCCTAATTGCCCTG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GCCAGAACTTCCAACACTATGTTGAATAGGAGTGGTGAAAGAGGACATCCCTGTCTTGTGCCAGTTTTCACAGG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CATACGTCCCATCAATACCTAATTTATTGAGAGTTTTTAGCATGAAGCGTTGTTGAATTTTGTCAAAGGCCTTT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TCTGCATCTATTGAGATAATCATGTGGTTTTTGTCTTTGGTTCTGTTTATATGCTGGATTACATTTATTGATTT 1998
Query 1 -------------------------------------------------------------------ATGGCCA 7
|||
Sbjct 1999 GTGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATG---- 2068
Query 8 TACTGC-------------CCAAGGTAATTTATAGA-----TTCAATGCCATCCCCATCAAGCTACCAATGACT 63
|.|||| ||| |||.|||||.|| || ||| |.|||||
Sbjct 2069 TGCTGCTGGATTCGGTTTGCCA--GTATTTTATTGAGGATTTT---TGC---------------ATCAATG--- 2119
Query 64 TTCTTCACAGA-ATTG---GAAAAAACTACTTTAAAGTT--------------CATATGGAACCA--------- 110
|||.|||..|| |||| |||||..||..|||...||| | |.|||.|.||
Sbjct 2120 TTCATCAGGGATATTGGTCGAAAATTCTCTTTTTTGGTTGTATCTCTGCCCGGC-TTTGGTATCAGGATGATGC 2192
Query 111 ---------AAAAAGAG-------------CCTGC-------------------ATCACCAAGTCAATCCTAAG 143
||||.||| ||| | |||||||||||.||||||||
Sbjct 2193 TGGCCTCATAAAATGAGTTAGGGAGTATTCCCT-CTTTTTCTATTGATTGGAATATCACCAAGTCCATCCTAAG 2265
Query 144 GCAAAAGAAAAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACACGGCTACAGTAACCAAAACAG 217
.||||||||.|||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||
Sbjct 2266 CCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAG 2339
Query 218 CATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATC 291
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||..|||||||||
Sbjct 2340 CATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAACACCGCATATC 2413
Query 292 TACAACTATCTGATCTTTGACAAACCTGACAAAAACAAGCAATGGGGAAAGGATTCCCTATCTAATAAATGGTG 365
|||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||
Sbjct 2414 TACAATTATCTGATCTTTGACAAACCTGACAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTG 2487
Query 366 CTGGGAAAACTGGCTAGCCATATGTAAAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATTAATT 439
||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||.||||
Sbjct 2488 CTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATT 2561
Query 440 CAAGGTGGATTAAAGACTTAAACATTAGACCTAAAACCATAAAAACCCTAGAAGAAAACCTTGGCATTACCATT 513
||||.||||||||||||||||||.|||||||||||||||||||||||||||||||||||||.||||||||||||
Sbjct 2562 CAAGATGGATTAAAGACTTAAACGTTAGACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATT 2635
Query 514 CAGGACATAGGAATGGGCAAGCACTTCATGTCTAAAACACCAAAAGCAATGGCAACAAAAGCCAAAATTGACAA 587
|||||||||||.||.||||||.||||||||||||||||||||||||||.|||||||||||||||||||||||||
Sbjct 2636 CAGGACATAGGCATAGGCAAGGACTTCATGTCTAAAACACCAAAAGCAGTGGCAACAAAAGCCAAAATTGACAA 2709
Query 588 ATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAG 661
|.|||||||||||||.|||||||||.|||||||||||||||||||||||||||||||||||||||||||||||.
Sbjct 2710 ACGGGATCTAATTAAGCTAAAGAGCCTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAA 2783
Query 662 AATGGGAGAAAATTTTCACAACCTACTCATCTGACAAAGGGCTAATATCCAGAATTTACAATGAACTCAAACAA 735
|||||||||||||||||.|||||||||||||||||||||||||||||||||||||.||||||||||||||||||
Sbjct 2784 AATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAA 2857
Query 736 ATT--- 738
|||
Sbjct 2858 ATTTAC 2863
