Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13802
- Subject:
- NR_125837.1
- Aligned Length:
- 1389
- Identities:
- 635
- Gaps:
- 690
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CATCAGACCTGAGGACAGAAGGGTTCGGGCTGCAAGGAATCCTATTGTGTGAGAGCCATGACACAGTGAGTGGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGTTTTGATCTTGACCTCCTGGAGCATTTTCATGGAAAAGGCAGTTCCAGGATTCTTTGTGGCCTCTTCCACAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GAGAAAGTAAAGGAGCTAGAGGCCTCTAAAAATTTAGTTATTGAAGAACTGAAGTTATTCACAGCAACCTGGCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GAAGAGAATGTGAAATACGTGGGTCTCAGGTAATAGGTAATATCCCTAATTCCACGGTGATGCTGAGAAGCAGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGGCGCCCTCAGAAGTAGTTTCTCTTAAGGAATTTGCAGCTGGCCTACAAGAACAGGACCACAGAATCAGGTCC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGTAAAAGGGTATGTAAAAGTTGTATTTTTTGCACATCTGTCTTGTATTCTGAGTCACACTCCTCTCATTGATT 444
Query 1 --------------------------------------------------ATGGC-CATACTGC-CCAAGGTAA 22
||||| .|||.|.| ||.|..|||
Sbjct 445 ATCCTTCACAATAGCCGTTGTTTTAACAGCGTTATGGAGATAAAGTTGAGATGGCATATAATTCACCCATTTAA 518
Query 23 TTTAT-AGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGA--------------- 80
..||| ||||||||||.|.| |.|.|.|.||||||||.|||.|
Sbjct 519 AGTATAAGATTCAATGGCTT-----------------TTAGTATATTCACAGAGTTGTACAAGTGTTACCACAA 575
Query 81 ------AAAAA---------------------------CTACTTTAAA-------------------------- 95
||||| .||.|||.||
Sbjct 576 TCAATTAAAAAATGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGCGTGATGCCTCCAGCTT 649
Query 96 -GTTCATATGGAACCAAAAAAGAGCCT--GC-------------------------ATCACC----AAGT---- 133
||||.|.||| |..|..|..|.|| || ||.|.| ||||
Sbjct 650 TGTTCTTTTGG---CTTAGGATTGACTTGGCGATGCGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTT 720
Query 134 -----CAATCCTAAGGCAAAAGAAA-------AAAGCTGGA--GGCATCACACTACCTGACTTCAAACTAT--A 191
||||.||..| |||||| ..||||.|| ||.||..|| ||.||.|||| |
Sbjct 721 TTTTCCAATTCTGTG----AAGAAAGTCATTGGTAGCTTGATGGGGATGGCA---------TTGAATCTATAAA 781
Query 192 CTACACGGCT---ACAGTA-----------ACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCA 251
.||| || .||||| |||||||||||||||||||||||||||||| ||||||||||||
Sbjct 782 TTAC----CTTGGGCAGTATGGCCATTTTCACCAAAACAGCATGGTACTGGTACCAAAAC--AGATATAGATCA 849
Query 252 ATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGACAAAA 325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||.||||
Sbjct 850 ATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCCGAGAAAA 923
Query 326 ACAAGCAATGGGGAAAGGATTCCCTATCTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAAAAAGCTG 399
|||||||||||||||||||||||||||.|||||||||||||.|.||||||||||||||||||||||.|||||||
Sbjct 924 ACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCCGAGAAAACTGGCTAGCCATATGTAGAAAGCTG 997
Query 400 AAACTGGATCCCTTCCTTACACCTTATACAAAAATTAATTCAAGGTGGATTAAAGACTTAAACATTAGACCTAA 473
||||||||||||||||||||||||||||||||||||||.|||||.|||||||||||||||||||||||||||||
Sbjct 998 AAACTGGATCCCTTCCTTACACCTTATACAAAAATTAACTCAAGATGGATTAAAGACTTAAACATTAGACCTAA 1071
Query 474 AACCATAAAAACCCTAGAAGAAAACCTTGGCATTACCATTCAGGACATAGGAATGGGCAAGCACTTCATGTCTA 547
|||||||||||||||||||||||||||.|||||||||||||||||||||||.|||||||||.|.||||||||||
Sbjct 1072 AACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCATGGGCAAGGATTTCATGTCTA 1145
Query 548 AAACACCAAAAGCAATGGCAACAAAAGCCAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACA 621
.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1146 GAACACCAAAAGCAATGGCAACAAAAGCCAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACA 1219
Query 622 GCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAGAATGGGAGAAAATTTTCACAACCTACTCATCTGA 695
|||||||||||||||||||||||||||||||||||||||.||||.||.||||||||..||.|||||||||||||
Sbjct 1220 GCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAAAATGAGAAAAAATTTTTGCAGCCTACTCATCTGA 1293
Query 696 CAAAGGGCTAATATCCAGAATTTACAATGAACTCAAACAAATT-------------- 738
|||||.|||||||||||||||.|||||||||||||||||||||
Sbjct 1294 CAAAGAGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAAA 1350
