Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13802
- Subject:
- NR_126435.1
- Aligned Length:
- 4678
- Identities:
- 700
- Gaps:
- 3946
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTTGCCTCTGCCATGTTAGAAGTGCCTTTCGCCTCCCACCATGACTCTGAGGCCTACACAGCCACGTCGAACTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CAAGTCCACTTAAACCTCTTTTCGTTCCCAGTTTCAGTGTGGTGGAAAAGGAAGAGAGAGCTGAGGCAGACGAT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GTAAGATCTGCTGTTACTTCTTGCTGTGTGACCTTGGGTGAAGTGAAGTGGGTGTGCCTGGGATCACACACAGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGAGACGGGGTTTCACTGTGTTCACCAGGATGGTCTCGATCTCCTGACCTTGTGATCCACCTGCCTCAGCCTCC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CAAAGTGCTGGGATTACAGGCGTGAGCCACTGCGCCCAGCCTGCAACTCTGTTTTTTGCTTTCAGGAAAATCAG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCCATGTTTGTGTCCACAAACAAGAGTGAAGATAATCTCTCCTATCTGAGAAATCCAGGAGTGGAGGAATCCAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TGGGAACTCTGGCCAAGCTAAAAGAAGGTCTCAAGAGCCACAGATGTCTTGGATATTTCTGTATTTCAGACTCT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ACTACCCAGACACCAAAAGAAGAAATGATTAACCCTGGAGGCTGCCTTGGTCTAGGTGAAAAAATATATGTACG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ATGACAGTGCAATCATACTAGAACTCAGGATTAAGAAACTCACTCAAAACTGCTCAACTACATGGAAACTGAAC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAGTAAAGATGTTCTTTGAAACCAACGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GAACAAAGACACAACATACCAGAATCTCTGGGACACATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ATGCCCACAAGAGAAAGCAGGAAAGATCTAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAGAAGCAA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GAGGAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGAC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 ACACAAGAACCCTTCAAAAAATCAATGAATCCAGGGGCTGGTTTTTTGAAAAGATCAATAAAATTGATAGACCG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CTAGCAAGATTAATAAAGAAGAAAAGAGAGAAGAATCAAATAGACTCAATAAAAAATGACAAAGGGGATATCAC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CACCAATCCCTCAGAAATACAAACTACCATCAGAGAATACTATAAACACCTCTACGCAAATAAACTAGAAAATC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TAGAAGAAATGGATAAATTCCTCGACACATACACTGTCCCAAGACTAAACCATGAAGAAGTTGAATCTCTGAAT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ACACCAATAACAGGCTCCGAAATTGAGGCAATAATTAATAGCTTACCAATGAAAAAAAGTCCAGGACCAGATGG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 ATTCACAGCCAAATTCTACCAGAGGTACATGGAGGAGCTGGTACCATTCCTTCTGAAACTATTCCAATCAATAG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AAAAAGAGGGAATCCTCCCTAATTCATTTTATGAGGCCAGCATCATCCTGATACCAAAGCCTGGCAGAGACACA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 ACCAAAAAGAATTTTAGACCAATATCCTTGATGAACACTGATGCAAAAATCCTCAATAAAATACTGGCAAACCG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AATCCAGCAACACATCAAAAAGCTTATCCACCATGATTAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 ACATACGAAAATCAATAAACGTAATCCAGCATATAAACAGAACCAAAGACAAAAACCACATGATTATCTCAATA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GACACAGAAAAGGCCTTTGAAAAATTCAACAACCATTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 ACCTATTTCAAAATAATAAGAGCTGTCTATGACAAACCCACAGCCAATATCACACTGAATGGACAAAAACTGAA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 AGCATTCCCTTTGAAAACTGGCACAACACATGGATGCCCTGTCTCACCACTCCTATTCAACATAGTGTTGGAAG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TTCTGGCCACAGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CTGTTTGCAGATGACATGATTGTATATCTAGAAAACCCCATTGCCTCAGCCCAAAATCTCCTTAAGCTGATAAG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTGCAAAAATCACAAGCATTCTTATACACCAATAACAGAC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 AAACAGAAAGCCAAATCATGAGTGAACTCTCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 CTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGATACAAA 2294
Query 1 ----------------------------------------------------ATGGCCATACTGCCCAAGGTAA 22
||||||||||||||||||||||
Sbjct 2295 CAAATGGAAGAAAAGTCCATGCTCATGGACAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAA 2368
Query 23 TTTATAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAG 96
||||||.|||||||||||||||||||||||||.||||||||||||||||||||||||||||||.||||||||||
Sbjct 2369 TTTATAAATTCAATGCCATCCCCATCAAGCTATCAATGACTTTCTTCACAGAATTGGAAAAAAGTACTTTAAAG 2442
Query 97 TTCATATGGAACCAAAAAAGAGCCTGCATCACCAAGTCAATCCTAAGGCAAAAGAAAAAAGCTGGAGGCATCAC 170
||||||||||||||||||||||||..|||..||||||||||||||||.||||||||.||||||||||||||||.
Sbjct 2443 TTCATATGGAACCAAAAAAGAGCCCACATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCAT 2516
Query 171 ACTACCTGACTTCAAACTATACTACACGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATA 244
.|||||||||||||||||||||.|||.|||||||||||..||||||||||||||||||||||||||||||||||
Sbjct 2517 GCTACCTGACTTCAAACTATACCACAAGGCTACAGTAATAAAAACAGCATGGTACTGGTACCAAAACAGAGATA 2590
Query 245 TAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCT 318
||||||||.|||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||.||
Sbjct 2591 TAGATCAAAGGAACAGAACAGAGCCCTCAGAAATAATGCCACATATCTACAACTATCTGATCTTTGACAAAACT 2664
Query 319 GACAAAAACAAGCAATGGGGAAAGGATTCCCTATCTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAA 392
||||||||||||||||||||||||||||||||||.||||||||||||||||||||| ||||||||||||||||.
Sbjct 2665 GACAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAA-TGGCTAGCCATATGTAG 2737
Query 393 AAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATTAATTCAAGGTGGATTAAAGACTTAAACATTA 466
|||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||..|||
Sbjct 2738 AAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATTAATTCAAGATGGATTAAAGACTTAAATGTTA 2811
Query 467 GACCTAAAACCATAAAAACCCTAGAAGAAAACCTTGGCATTACCATTCAGGACATAGGAATGGGCAAGCACTTC 540
|||||||||||.||||.|||||||||||||||||.||||.|||.||||||||||||||.|||||||||||||||
Sbjct 2812 GACCTAAAACCGTAAATACCCTAGAAGAAAACCTAGGCAATACTATTCAGGACATAGGCATGGGCAAGCACTTC 2885
Query 541 ATGTCTAAAACACCAAAAGCAATGGCAACAAAAGCCAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTT 614
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 2886 ATGTCTAAAACACCAAAAGCAATGGCAACAAAAGCCAAAATTGACAAATGGGATCTAAT-----TAAAGAGCTT 2954
Query 615 CTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAGAATGGGAGAAAATTTTCACAACCTACT 688
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||..|||||||||
Sbjct 2955 CTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAGAATGGGAGAAAATTTTTGCAACCTACT 3028
Query 689 CATCTGACAAAGGGCTAATATCCAGAATTTACAATGAACTCAAACAAATT------------------------ 738
||||||||||||||||||||||||||||.|||||||||||||||||||||
Sbjct 3029 CATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCC 3102
Query 739 -------------------------------------------------------------------------- 738
Sbjct 3103 ATCAAAAAGTGGGTGAAGGATATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGGCAAAAAACACATGAA 3176
Query 739 -------------------------------------------------------------------------- 738
Sbjct 3177 AAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACAATGAGATACCATCTCACACCAGTTA 3250
Query 739 -------------------------------------------------------------------------- 738
Sbjct 3251 GAATGGCAATCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTT 3324
Query 739 -------------------------------------------------------------------------- 738
Sbjct 3325 ACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTTGGTGTGGTGATTCCTCAGGGATCTAGAAC 3398
Query 739 -------------------------------------------------------------------------- 738
Sbjct 3399 TAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGATTATAAATCATGCTGCTATAAA 3472
Query 739 -------------------------------------------------------------------------- 738
Sbjct 3473 GACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAAC 3546
Query 739 -------------------------------------------------------------------------- 738
Sbjct 3547 AATGATAGACTGGATTAAGAAAATGTGGCACACACACACCATGGAATACTATGCAGCCATAAAAATTGATGAGT 3620
Query 739 -------------------------------------------------------------------------- 738
Sbjct 3621 TCATGTCCTTTGTAGGGACATGGGTGAAGCTGGAAACCATCATTCTCAACAAACTATTGCAAAAGGACAAAAAA 3694
Query 739 -------------------------------------------------------------------------- 738
Sbjct 3695 CCAAACACCGCATGTTCTCACTCATAGGTGGGAATTGAACAATGAGAACACATGGACACAGGAAGGGGAACATC 3768
Query 739 -------------------------------------------------------------------------- 738
Sbjct 3769 ACACTCTGGGGACTGTTGTGGGGTGGGGGGAGGCGCGAGGGATAGCATTAGGAGATATACCTAATGCTAAACGA 3842
Query 739 -------------------------------------------------------------------------- 738
Sbjct 3843 CGAGTTAATGGGTGTAGCACACCAACATGGCACATGTATACATATGTAACAAACCTGCAGGTTGTGCACATGTA 3916
Query 739 -------------------------------------------------------------------------- 738
Sbjct 3917 CCCTAAAACTTAAAGTATAATAACAATAATAATAATAATAGGAATCTAAAAAAAAAAACAATTTAAATAATGTC 3990
Query 739 -------------------------------------------------------------------------- 738
Sbjct 3991 ACCTAAGATTTTTTACAATTAGCAAGTGCTGGGGATTCAATCCAGGGAGTCTGACATCCAGAGCCAATACTTTA 4064
Query 739 -------------------------------------------------------------------------- 738
Sbjct 4065 CTACATGAAACAGCCCTAAAAAGAGCAGAGAATCTGTCTTCACAGATTTTCAAAGAGTAAGGAAACATGGTTAG 4138
Query 739 -------------------------------------------------------------------------- 738
Sbjct 4139 GCCTAGTGGTCAGGGAATGCTTTGTAGATGCAGTGGGGTGTGGAAAGAGGCCATGAAGAAGAAAGAGGATTTGA 4212
Query 739 -------------------------------------------------------------------------- 738
Sbjct 4213 AAGAAGAGAGAGGAATGAAGAAAGACTTCTAATAAATATGCTTGCTACGATCAATTCTGTGTCCTCCCTTTTCT 4286
Query 739 -------------------------------------------------------------------------- 738
Sbjct 4287 ATAAAATATGATCCTTGGCCCCTATAATTTCTTGACTCTAAATGTTTGAAAGAGTGAATCAGCATTATCATGGA 4360
Query 739 -------------------------------------------------------------------------- 738
Sbjct 4361 ACAATATGTGCTGATGGGTATAGTCTCCCCCTTTGATTGGTACTTTGCAAGTTTCACAAATAACTAACCACCTG 4434
Query 739 -------------------------------------------------------------------------- 738
Sbjct 4435 AGAACTTGTCTCCCTTGAACTGAATTCCATTTTAATTTTGTTCACCTTCTTGATTCTCTTCTTTTTGTGTCAAA 4508
Query 739 -------------------------------------------------------------------------- 738
Sbjct 4509 ATTGTACTTTTGCAAAGATGATTTCAAAAGTGTTTTCTTTCTGATTTAGTGCGGCCAGTTTTCAACATTCGGTC 4582
Query 739 -------------------------------------------------------------------------- 738
Sbjct 4583 TGAAATTGAGGAGTTGCTGTATGAAAAGTGAATTTATTTGAATGGTAAAGTTTCCTGTGAACAGAAATAAAGTA 4656
Query 739 ---------------- 738
Sbjct 4657 TTGTTTCACTCTGAAA 4672
