Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13802
- Subject:
- NR_163175.1
- Aligned Length:
- 2450
- Identities:
- 303
- Gaps:
- 2138
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGTGTAAGTAGTCGCCATGTTTCTGTCGCTATCACTTTCTTGGGGGTGTCACTGATCACTGGCTATTGCGACTA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCAGACGCTCTGGACACTTGGAACGCTCCTGAGTTTGCGGCTGGGTCCACTTCCTGAATGATACTAGGATCCCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCCTCTGGTTTCTTTTGGCTGCCCCCGAGCTACCTCAGTCTTTTTCAATGTCAGGCGGTCCAAGTTCCCTGTGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGAAAATGGAGCCCAGTGAGTCGTGCCCATGGCAGCGCACCTGGTTTTGCAGCCTGGGCAGGTCACAGGTGCAT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTTCCACGGGGATTTGAGCCAGCGTGCACCCCCATAGCGCGACTGAGATTCCAAGTCACACCCAGGTTTTGGCC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCGCAAATCCGCCTCTGCTCCCAGCTGGCACCTGAGTATGCAGGTCGCAGCCCGCGATTTAGAAACACCGGCAC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCGGGTGAACGCCCACGGCTCCTCAGCTTTCGCTGCACCGACGTCTGCACCACGCCCGTCAAGCTCAGCTGCAT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CCTGACTCTGGGTTGGAAACTTCGTGGTGGATGATGCCTGTAACTACCCAGATGAAATCAAGACGCAACAGCCC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TCATCGAGGGATGCTCAGAGTCAAGGAAACTTTTCTTTTGAGCTACTGACAGCTTAACTCCTGTGAACAAAATT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TGGAGCATATTTGTTTCTCTCTGCCTGATTTCTCCAAAATTTGGAAACTATTTCTCTTTTTGCCTAACTCTTCC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CAAGAAACCACTCCTTCTGCACACCTCCCTAAATGGCGAGCCCTCCCTGCCTTTCCTCACCTGCCAAGCCCAGT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CCCCAGGACCTGCACCCACAGCCAGTCCCAAAATCCACTCTGAGCTGTTAACAGCAACCAGAGAAGCTCAGAGA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CATCATCCTGTGCCCCGTGGTCAAGACCTAGTGACCTCAGAATCATTCTCGCTCTCCTTCTGCTTCTCAGCTGC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CATCTTCATTTTTGAACTTTTGGGTTCAAACTCAGAAGGAGTCACAGATCTTAGACTGTGGCTATGCCAGCCAG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CGCCCAGGTGCGGGGAGTGGACCTACAACCCCTTGGAGCAGTGCTGTGATGACGGTGTCATCCTAGACTTGAAC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CAGACCCGGCTCTGCGGCTCCAGCTGCACCTTCTGGCCCTGCTTCCAGCACTGCTGCCTGGAGTCTTTGGGCTC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TCAGAACCAGACAGTTGTGAGGTTCAAGGTCCCAGGCATGAAGCCAGATTGCAAGTCCTCCCCTATCACCAGGA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TCTGTGCCCAGGAATACCACCCAAAAAGCCCTGTGTCAAGATCTGACCTCATCTAGACTGTTCTGGGGTAGCAG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AGTCACAGATCACTCTAGAATCTAATACTTGGTAATTATACTGCATTGATTTTGTTGTTGTTGTGACAGAGTTT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CACTCTGTCCCCCAGGCTGGAGTGCAAATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 ATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGAGTGAACTCCCATTCACAATTG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CTTCACAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CCACTGCTCAAGGAAATAAAAGAGGATACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAA 1702
Query 1 ----------ATGGCCATACTGCCCAAGGTAATTTATAGATTCAATGCCATCCCCATCAAGCTACCAATGACTT 64
||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||
Sbjct 1703 TATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTT 1776
Query 65 TCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCTGCATCACCAAGTCAATC 138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||..||||.|||||||||||
Sbjct 1777 TCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCTCATCGCCAAGTCAATC 1850
Query 139 CTAAGGCAAAAGAAAAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACACGGCTACAGTAACCAA 212
|||||.||||||||.|||||||||||||||||||||||||||||||||||||||||.|.|||||||||||||||
Sbjct 1851 CTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTATAAGGCTACAGTAACCAA 1924
Query 213 AACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGC 286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||
Sbjct 1925 AACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAACGCCGC 1998
Query 287 ATATCTACAACTATCTGATCTTTGACAAACCTGACAAAAACAAGCAATGGGGAAAGGATTCCCTATCTAATAAA 360
||||||||||||||||||||||||||
Sbjct 1999 ATATCTACAACTATCTGATCTTTGAC------------------------------------------------ 2024
Query 361 TGGTGCTGGGAAAACTGGCTAGCCATATGTAAAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAAT 434
Sbjct 2025 -------------------------------------------------------------------------- 2024
Query 435 TAATTCAAGGTGGATTAAAGACTTAAACATTAGACCTAAAACCATAAAAACCCTAGAAGAAAACCTTGGCATTA 508
Sbjct 2025 -------------------------------------------------------------------------- 2024
Query 509 CCATTCAGGACATAGGAATGGGCAAGCACTTCATGTCTAAAACACCAAAAGCAATGGCAACAAAAGCCAAAATT 582
Sbjct 2025 -------------------------------------------------------------------------- 2024
Query 583 GACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACC 656
Sbjct 2025 -------------------------------------------------------------------------- 2024
Query 657 TACAGAATGGGAGAAAATTTTCACAACCTACTCATCTGACAAAGGGCTAATATCCAGAATTTACAATGAACTCA 730
Sbjct 2025 -------------------------------------------------------------------------- 2024
Query 731 AACAAATT 738
Sbjct 2025 -------- 2024
