Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13802
- Subject:
- XR_001738122.1
- Aligned Length:
- 2245
- Identities:
- 442
- Gaps:
- 1779
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGCCCCCGCCGCCTCTGTACCAGGGAGAGCGCCTGGAAGGCGCCGCTGCCTCTCTCTCCCTACGTGCCCACCTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCTCTAGGAACTGCTAAGACCGCTAATACAATGCTGGATAGAAGTGGTGATCACAGACAGTCTTGTTACTCATT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGAAAGGGAAAGCCTTCAGTGTCTCAACACTAGAAGAATTTCCACTACTGTGAACTTCCTGGCCTCTTACCAGA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ACCAAATTATCTGATTTGAGGATTTAAAAGAAGGAAACAGGCATGCTTGGCTCAGCCTCTGTCTTTCTGGCTCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCCTTTCTGCAGTGAGGATGCATCTTTTCTTGCTCACCTGCCAATGCTAAAAGAAGACTTTATGGGCTAGTGAC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ATGGAAGGTTTGTGTTGATTCTGATCTGCCTTTGACTGGATGGATAAGTTGAATTCCATAATTCAGTATTAGAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AACTCACTTGGCTCACAGCTACACCATGTCCCCTAATGTAACTTTTATCAGCAATAGCACTATAGAGTAACAAA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GTAACAGATGATGACCATATGTCTGACTCTAGTATTTCTCTATCAAATGGTTCTGAGCTTGGGCAGGAATGAAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ATGTATTTACTGACATCTCAAAATGATTATAATCACAATACTGGGCCATCCTGACCATTTATCAGAAGTCCAGA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AGTCAAGATTCCGTGGTCGGAAATCTCTTTTGACCACCAGCAGAAGAAAATAAAAAAGTCTGAAGCAACTGTAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AACATACCTTTTTCCTCCAACGTAACCAAGAAGACTCGTCCTACTTTGTGTACCCACAAAAGCTACAAGATCCA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TCAACAGAAATTAGTTTATGAAATCTAGAATTGTGGGAATGACATTAAAGAGTCTCAGTGAATTACTTCTTAGA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TTGAAATTTAAGATTTTCCTGACCATGCTCCCAGAGTATCACCCCTTAACAAGAAGGCTCTTCATTTATATGGT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 ATGATGTCCAAAAAATGGCTATCATTCTTTTAAATCATATAAAAGTATTAATGAAAGTATTAAAAGTTTTATTT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CAATAATTTGCTTCAGTGAAACCATTAAAACTGTAGAATATAACTTTGATATTTAAATATTTTAAATATTAATG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GTTACCTTTACCACTGCTATTATTGTGATCAACCAGCTTCTATTTGTAGAAGAGTTAAAAGAGGTTAAATGTCT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TGCAATGCAATGACATAAATGTCATGCAACACTACAATGACAGAATCTAAGACAAACAAAAATTTAAAATATTT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CTCTTAATACTTTCTATTAAAAATATTCTGAGCCATTCTGCTGTTACAGGACACATTTGTAATAAAGTTCATTT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TATTATACTCCCCAAGTTTTTTAAACAAACAGATCAATTTCTAGGTGTTTTTAACAAAAGAAAATCCGAGCTAT 1406
Query 1 -------------------------------------------------------------------------A 1
|
Sbjct 1407 CGTGGTTCCATTTTCCTCATTGTTTATTCAACTATTCACTGACTTTTTGAGTATCACTTAGTGTTTCAAAGTCA 1480
Query 2 TGG-----------CCATACTG--------CCCAAGGTA-----ATTTA----TAGATTCAATGCCATCCCCAT 47
||| |.||.||| ..|||..|| |||.| |||||||||||||||||.|||
Sbjct 1481 TGGCTTAATTTCTTCTATCCTGAATAGTACTACAACTTACAAATATTAAAACTTAGATTCAATGCCATCCGCAT 1554
Query 48 CAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCT 121
|||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||| ||||||||||.
Sbjct 1555 CAAGCTACCAATGACTTTCCTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACC-AAAAAGAGCCC 1627
Query 122 GCATCACCAAGTCAATCCTAAGGCAAAAGAAAAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTAC 195
|||||.||||||||||||||||.||||||||.|||||||||||||||||.||||||||||||||||||||||||
Sbjct 1628 GCATCGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACGCTACCTGACTTCAAACTATACTAC 1701
Query 196 ACGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCC 269
|.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1702 AAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCC 1775
Query 270 CTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGACAAAAACAAGCAATGGGGAAAGG 343
||||||||||||||||||||||||||||||||.|||||||||.||||||||.|||||.||||||||||||||||
Sbjct 1776 CTCAGAAATAATGCCGCATATCTACAACTATCCGATCTTTGAGAAACCTGAGAAAAATAAGCAATGGGGAAAGG 1849
Query 344 ATTCCCTATCTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAAAAAGCTGAAACTGGATCCCTTCCTT 417
|||||||||.||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||
Sbjct 1850 ATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTT 1923
Query 418 ACACCTTATACAAAAATTAATTCAAGGTGGATTAAAGACTTAAACATTAGACCTAAAACCATAAAAACCCTAGA 491
||||||||||||||||||||||||||.|||||||||||||||||..||||
Sbjct 1924 ACACCTTATACAAAAATTAATTCAAGATGGATTAAAGACTTAAATGTTAG------------------------ 1973
Query 492 AGAAAACCTTGGCATTACCATTCAGGACATAGGAATGGGCAAGCACTTCATGTCTAAAACACCAAAAGCAATGG 565
Sbjct 1974 -------------------------------------------------------------------------- 1973
Query 566 CAACAAAAGCCAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATC 639
Sbjct 1974 -------------------------------------------------------------------------- 1973
Query 640 AGAGTGAACAGGCAACCTACAGAATGGGAGAAAATTTTCACAACCTACTCATCTGACAAAGGGCTAATATCCAG 713
Sbjct 1974 -------------------------------------------------------------------------- 1973
Query 714 AATTTACAATGAACTCAAACAAATT 738
Sbjct 1974 ------------------------- 1973
