Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_13802
Subject:
XR_001738122.1
Aligned Length:
2245
Identities:
442
Gaps:
1779

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GGCCCCCGCCGCCTCTGTACCAGGGAGAGCGCCTGGAAGGCGCCGCTGCCTCTCTCTCCCTACGTGCCCACCTG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CCTCTAGGAACTGCTAAGACCGCTAATACAATGCTGGATAGAAGTGGTGATCACAGACAGTCTTGTTACTCATT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TGAAAGGGAAAGCCTTCAGTGTCTCAACACTAGAAGAATTTCCACTACTGTGAACTTCCTGGCCTCTTACCAGA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  ACCAAATTATCTGATTTGAGGATTTAAAAGAAGGAAACAGGCATGCTTGGCTCAGCCTCTGTCTTTCTGGCTCT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GCCTTTCTGCAGTGAGGATGCATCTTTTCTTGCTCACCTGCCAATGCTAAAAGAAGACTTTATGGGCTAGTGAC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  ATGGAAGGTTTGTGTTGATTCTGATCTGCCTTTGACTGGATGGATAAGTTGAATTCCATAATTCAGTATTAGAA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  AACTCACTTGGCTCACAGCTACACCATGTCCCCTAATGTAACTTTTATCAGCAATAGCACTATAGAGTAACAAA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GTAACAGATGATGACCATATGTCTGACTCTAGTATTTCTCTATCAAATGGTTCTGAGCTTGGGCAGGAATGAAA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  ATGTATTTACTGACATCTCAAAATGATTATAATCACAATACTGGGCCATCCTGACCATTTATCAGAAGTCCAGA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  AGTCAAGATTCCGTGGTCGGAAATCTCTTTTGACCACCAGCAGAAGAAAATAAAAAAGTCTGAAGCAACTGTAA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  AACATACCTTTTTCCTCCAACGTAACCAAGAAGACTCGTCCTACTTTGTGTACCCACAAAAGCTACAAGATCCA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TCAACAGAAATTAGTTTATGAAATCTAGAATTGTGGGAATGACATTAAAGAGTCTCAGTGAATTACTTCTTAGA  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  TTGAAATTTAAGATTTTCCTGACCATGCTCCCAGAGTATCACCCCTTAACAAGAAGGCTCTTCATTTATATGGT  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  ATGATGTCCAAAAAATGGCTATCATTCTTTTAAATCATATAAAAGTATTAATGAAAGTATTAAAAGTTTTATTT  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  CAATAATTTGCTTCAGTGAAACCATTAAAACTGTAGAATATAACTTTGATATTTAAATATTTTAAATATTAATG  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  GTTACCTTTACCACTGCTATTATTGTGATCAACCAGCTTCTATTTGTAGAAGAGTTAAAAGAGGTTAAATGTCT  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  TGCAATGCAATGACATAAATGTCATGCAACACTACAATGACAGAATCTAAGACAAACAAAAATTTAAAATATTT  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  CTCTTAATACTTTCTATTAAAAATATTCTGAGCCATTCTGCTGTTACAGGACACATTTGTAATAAAGTTCATTT  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  TATTATACTCCCCAAGTTTTTTAAACAAACAGATCAATTTCTAGGTGTTTTTAACAAAAGAAAATCCGAGCTAT  1406

Query    1  -------------------------------------------------------------------------A  1
                                                                                     |
Sbjct 1407  CGTGGTTCCATTTTCCTCATTGTTTATTCAACTATTCACTGACTTTTTGAGTATCACTTAGTGTTTCAAAGTCA  1480

Query    2  TGG-----------CCATACTG--------CCCAAGGTA-----ATTTA----TAGATTCAATGCCATCCCCAT  47
            |||           |.||.|||        ..|||..||     |||.|    |||||||||||||||||.|||
Sbjct 1481  TGGCTTAATTTCTTCTATCCTGAATAGTACTACAACTTACAAATATTAAAACTTAGATTCAATGCCATCCGCAT  1554

Query   48  CAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCT  121
            |||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||| ||||||||||.
Sbjct 1555  CAAGCTACCAATGACTTTCCTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACC-AAAAAGAGCCC  1627

Query  122  GCATCACCAAGTCAATCCTAAGGCAAAAGAAAAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTAC  195
            |||||.||||||||||||||||.||||||||.|||||||||||||||||.||||||||||||||||||||||||
Sbjct 1628  GCATCGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACGCTACCTGACTTCAAACTATACTAC  1701

Query  196  ACGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCC  269
            |.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1702  AAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCC  1775

Query  270  CTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGACAAAAACAAGCAATGGGGAAAGG  343
            ||||||||||||||||||||||||||||||||.|||||||||.||||||||.|||||.||||||||||||||||
Sbjct 1776  CTCAGAAATAATGCCGCATATCTACAACTATCCGATCTTTGAGAAACCTGAGAAAAATAAGCAATGGGGAAAGG  1849

Query  344  ATTCCCTATCTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAAAAAGCTGAAACTGGATCCCTTCCTT  417
            |||||||||.||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||
Sbjct 1850  ATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTT  1923

Query  418  ACACCTTATACAAAAATTAATTCAAGGTGGATTAAAGACTTAAACATTAGACCTAAAACCATAAAAACCCTAGA  491
            ||||||||||||||||||||||||||.|||||||||||||||||..||||                        
Sbjct 1924  ACACCTTATACAAAAATTAATTCAAGATGGATTAAAGACTTAAATGTTAG------------------------  1973

Query  492  AGAAAACCTTGGCATTACCATTCAGGACATAGGAATGGGCAAGCACTTCATGTCTAAAACACCAAAAGCAATGG  565
                                                                                      
Sbjct 1974  --------------------------------------------------------------------------  1973

Query  566  CAACAAAAGCCAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATC  639
                                                                                      
Sbjct 1974  --------------------------------------------------------------------------  1973

Query  640  AGAGTGAACAGGCAACCTACAGAATGGGAGAAAATTTTCACAACCTACTCATCTGACAAAGGGCTAATATCCAG  713
                                                                                      
Sbjct 1974  --------------------------------------------------------------------------  1973

Query  714  AATTTACAATGAACTCAAACAAATT  738
                                     
Sbjct 1974  -------------------------  1973

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