Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13854
- Subject:
- XR_002956619.1
- Aligned Length:
- 2528
- Identities:
- 1064
- Gaps:
- 1444
Alignment
Query 1 --------------------------------------------ATGAACGGCTGCAGAAGCAACCACTTACCT 30
|.|| ||||||.| |.|| |||
Sbjct 1 AGGTGGAGAGGAGATGCGCCGAGGGATGGAGGTGTATGTCACCGAGGA--GGCTGCTG-------CGCT--CCT 63
Query 31 CCCCCGGGAGCGTGAGCCC--------CTCCCGAGATTCCAGTGTGCCTGGC------TCTCCCTCCAGCATCG 90
.||||..| .|.||.|||| ||| |.|.|||| .||.||| .||||.|.|.||||.|
Sbjct 64 GCCCCACG-CCCTGGGCCCTTGAAGGGCTC------TGCGAGTG-ACCCGGCGGGCGAGCTCCGTGCTGCATGG 129
Query 91 ------------TGGCCAAGATGGACAATCAGGTGCTGGGCTACAAGGACCTGGCTGCCATCCCCAAGGACAAG 152
.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 130 AACGGCTGCAGAAGGCCAAGATGGACAATCAGGTGCTGGGCTACAAGGACCTGGCTGCCATCCCCAAGGACAAG 203
Query 153 GCCATCCTGGACATCGAGCGGCCCGACCTCATGATCTACGAGCCTCACTTTACTTATTCCCTCCTGGAACACGT 226
||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||
Sbjct 204 GCCATCCTGGACATCGAGCGGCCCGACCTCATGATCTACGAGCCTCACTTCACTTATTCCCTCCTGGAACACGT 277
Query 227 GGAGCTGCCTCGCAGCCGCGAGCGCTCGCTGTCACCCAAATCCACATCCCCCCCACCATCCCCAGAGGTGTGGG 300
||||||||||||||||||| ||||||||||
Sbjct 278 GGAGCTGCCTCGCAGCCGC---------------------------------------------GAGGTGTGGG 306
Query 301 CGGACAGCCGGTCGCCTGGAATCATCTCTCAGGCCTCGGCCCCCAGAACCACTGGAACCCCCCGGACCAGCCTG 374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 307 CGGACAGCCGGTCGCCTGGAATCATCTCTCAGGCCTCGGCCCCCAGAACCACTGGAACCCCCCGGACCAGCCTG 380
Query 375 CCCCATTTCCACCACCCTGAGACCTCCCGCCCAGATTCCAACATCTACAAGAAGCCTCCCATCTATAAGCAGAG 448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 381 CCCCATTTCCACCACCCTGAGACCTCCCGCCCAGATTCCAACATCTACAAGAAGCCTCCCATCTATAAGCAGAG 454
Query 449 AGAGTCCGTGGGAGGCAGCCCTCAGACCAAGCACCTCATCGAGGATCTCATCATCGAGTCATCCAAGTTTCCTG 522
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 455 AGAGTCCGTGGGAGGCAGCCCTCAGACCAAGCACCTCATCGAGGATCTCATCATCGAGTCATCCAAGTTTCCTG 528
Query 523 CAGCCCAGCCCCCAGACCCCAACCAGCCAGCCAAAATCGAAACCGACTACTGGCCATGCCCCCCGTCTCTGGCT 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 529 CAGCCCAGCCCCCAGACCCCAACCAGCCAGCCAAAATCGAAACCGACTACTGGCCATGCCCCCCGTCTCTGGCT 602
Query 597 GTTGTGGAGACAGAATGGAGGAAGCGGAAGGCGTCTCGGAGGGGAGCAGAGGAAGAGGAGGAGGAGGAAGATGA 670
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 603 GTTGTGGAGACAGAATGGAGGAAGCGGAAGGCGTCTCGGAGGGGAGCAGAGGAAGAGGAGGAGGAGGAAGATGA 676
Query 671 CGACTCTGGAGAGGAGATGAAGGCTCTCAGGGAGCGTCAGAGAGAGGAACTCAGTAAGGTTACTTCCAACTTGG 744
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 677 CGACTCTGGAGAGGAGATGAAGGCTCTCAGGGAGCGTCAGAGAGAGGAACTCAGTAAGGTTACTTCCAACTTGG 750
Query 745 GAAAGATGATCTTGAAAGAAGAGATGGAAAAGTCATTGCCGATCCGAAGGAAAACCCGCTCTCTGCCTGACCGG 818
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 751 GAAAGATGATCTTGAAAGAAGAGATGGAAAAGTCATTGCCGATCCGAAGGAAAACCCGCTCTCTGCCTGACCGG 824
Query 819 ACACCCTTCCATACCTCCTTGCACCAGGGAACGTCTAAATCTTCCTCTCTCCCCGCCTATGGCAGGACCACCCT 892
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 825 ACACCCTTCCATACCTCCTTGCACCAGGGAACGTCTAAATCTTCCTCTCTCCCCGCCTATGGCAGGACCACCCT 898
Query 893 GAGCCGGCTACAGTCCACAGAGTTCAGCCCATCAGGGAGTGAGACTGGAAGCCCAGGCCTGC------------ 954
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 899 GAGCCGGCTACAGTCCACAGAGTTCAGCCCATCAGGGAGTGAGACTGGAAGCCCAGGCCTGCAGGTGAGTGCCT 972
Query 955 -------------------------------------------------------------------------- 954
Sbjct 973 CCTGGAGGGGAACAGGCAGAGCAGCAGAAGCTGGGTCCTGGCACCCGAAAGTGTCAGGGGAAGGGGGGTGTGGG 1046
Query 955 -------------------------------------------------------------------------- 954
Sbjct 1047 GCCACAGAGTTGCCTGGTGAAGAAGAAGAAGCCGGGGTAAGGCTGGGAAGGTCTCCCTGCCCCGCTCTGGCTCA 1120
Query 955 -------------------------------------------------------------------------- 954
Sbjct 1121 CTGCGGCTTTGGTCTCCCCAGAACGGAGAGGGCCAGAGGGGGAGGATGGACCGGGGGAACTCCCTGCCCTGTGT 1194
Query 955 -----------AGATCTATCCCTATGAAATGCTAGTGGTGACCAACAAGGGGCGAACCAAGCTGCCACCGGGGG 1017
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1195 GCTGGAGCAGAAGATCTATCCCTATGAAATGCTAGTGGTGACCAACAAGGGGCGAACCAAGCTGCCACCGGGGG 1268
Query 1018 TGGATCGGATGCGGCTTGAGAGGCATCTGTCTGCCGAGGACTTCTCAAGGGTATTTGCCATGTCCCCTGAAGAG 1091
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1269 TGGATCGGATGCGGCTTGAGAGGCATCTGTCTGCCGAGGACTTCTCAAGGGTATTTGCCATGTCCCCTGAAGAG 1342
Query 1092 TTTGGCAAGCTGGCTCTGTGGAAGCGGAATGAGCTCAAGAAGAAGGCCTCTCTCTTC----------------- 1148
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1343 TTTGGCAAGCTGGCTCTGTGGAAGCGGAATGAGCTCAAGAAGAAGGCCTCTCTCTTCTGATGGCCCCCACCTGC 1416
Query 1149 -------------------------------------------------------------------------- 1148
Sbjct 1417 TCCGGGACGGCCCCCTTACCCCTGCTGCTTCAGGGTTTTTCCCCGGCGGGTTGGGAGGGGCAGGAGGTGGGGTG 1490
Query 1149 -------------------------------------------------------------------------- 1148
Sbjct 1491 GAAATAGGGTGGGCTCCTTTCCTCAGGTAGAGTGGGGGGCCAAAACCTCTGCAGTCCCCGGCAGTGAGCTATGG 1564
Query 1149 -------------------------------------------------------------------------- 1148
Sbjct 1565 ACTTTCTTCCCCCTCACAAGGCTGGGGGCCTCCTGCTCTCGTCCCTGGCCCTCCCTGCACAGGGCAAAGCCAGT 1638
Query 1149 -------------------------------------------------------------------------- 1148
Sbjct 1639 CTGGGCTCTGGCACACAGAGTTCATGTTTGCGCCCTCTCCCTGCCCCTCACCCCAGAGGGTGAGGAGGAATGAG 1712
Query 1149 -------------------------------------------------------------------------- 1148
Sbjct 1713 GGGCATTGGTGGTTAGGCCGGTTGGCTGTCTTGAACAGCTGGAGGGAAGATGCAGGGGTGGGAAGCGGCCAGGC 1786
Query 1149 -------------------------------------------------------------------------- 1148
Sbjct 1787 AGAAAGAGCTCCAGGCTCTTGTGTCGCCCACCCAGCCCTCCCATACTCACTCCTGACAGCTTTCCTGCACTGCA 1860
Query 1149 -------------------------------------------------------------------------- 1148
Sbjct 1861 GCCTCCTGCTCCTCTGACTCTAGTGGGAACAGGCCCCAGCTCAGCCTCCGGCAGGGAGGTCACCCCTCCACTTC 1934
Query 1149 -------------------------------------------------------------------------- 1148
Sbjct 1935 AGCTTGCCCTGACCTCCGCTCGCAAACCCCGAGCTTCCAAGCCTTTTGCTCCAGCCCTGCGGCTTCCCCAGAAG 2008
Query 1149 -------------------------------------------------------------------------- 1148
Sbjct 2009 CCTGGGCTTAGGGTGGAGATGCCGCCTACACACGATCCTGGCCCTCCACCTGCCTCCAGGCCACGAAATGGGAA 2082
Query 1149 -------------------------------------------------------------------------- 1148
Sbjct 2083 TTCCAGCACTAAGCCAGGCACCGGGCAGAAGCTGGGCCTTCCGCCTCCCTTGGATGGGGTCAAGAGGCCAGGCC 2156
Query 1149 -------------------------------------------------------------------------- 1148
Sbjct 2157 TGGCACATTTTGGAGTGTCCTGGCTACCAGCTCTCACCTACACCCACGCACCCCCCCACACACTATGCTCTCTC 2230
Query 1149 -------------------------------------------------------------------------- 1148
Sbjct 2231 AAGAATGTAATTTATTGGGGCCCCCCCAGCTGCTTTCCTCACCTGCCCCTGCCCTACCTTACACCCCCAGCTTG 2304
Query 1149 -------------------------------------------------------------------------- 1148
Sbjct 2305 ACTTCTTTCCAGTCCACGTGTGTATATAATGATATCTATATTTTTGCCCAGGTCTGGGTATTGCTCCTGCCCAG 2378
Query 1149 -------------------------------------------------------------------------- 1148
Sbjct 2379 ACCCTGACATCCCTTTCCACTGTGTGTGTGACCATGCTGGGGGAGGGGGACTCTGCTTGGAATTAAAAGGTTGC 2452
Query 1149 ------------ 1148
Sbjct 2453 ATTGGGTCCCTA 2464
