Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_14082
- Subject:
- NM_001363756.1
- Aligned Length:
- 5518
- Identities:
- 1557
- Gaps:
- 3961
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGAGACCGGCTCCGACTCAGATCAGCTTGAACGGGTCTTTTTACGACTTGGCCATGCTGAAACAGATGAACA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ATTACAGAATATTATATCTAAATTCCTTCCTCCTGTTTTGCTCAAACTCTCTAGCACCCAAGAAGGAGTACGTA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AAAAGGTAATGGAACTGCTGGTCCATCTGAATAAACGTATAAAAAGCCGCCCCAAAATACAACTTCCAGTAGAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ACACTGTTGGTTCAGTACCAGGACCCTGCTGCAGTTTCCTTTGTCACAAATTTTACTATAATTTATGTTAAAAT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGGCTATCCTCGCCTACCAGTGGAAAAACAATGTGAACTGGCCCCTACGCTTCTTACTGCCATGGAAGGGAAGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTCAGCCACAGCAGGATAGCTTAATGCATCTTTTAATACCAACCCTTTTTCACATGAAATACCCTGTTGAATCA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TCAAAATCAGCTTCTCCATTTAATCTTGCTGAGAAACCAAAGACTGTGCAGCTGCTTTTGGACTTCATGCTAGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGTCCTTCTGATGCCTTATGGTTACGTGTTAAATGAATCCCAGAGTCGCCAAAATTCATCTTCAGCACAGGGTT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CTTCTTCAAACAGTGGCGGAGGTTCTGGAATCCCACAGCCTCCTCCGGGAATGAGCTTTTATGCAGCCAAACGA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GTTATTGGTGATAACCCATGGACACCTGAACAATTGGAACAGTGCAAATTGGGAATCGTGAAATTCATAGAAGC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TGAACAGGTGCCTGAACTTGAAGCTGTTCTCCACTTGGTGATTGCCTCTAGTGATACACGCCACAGTGTGGCAA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CGGCAGCAGACCTGGAATTGAAAAGCAAACAGAGCTTAATTGACTGGAATAATCCTGCCATCATTAATAAGATG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TACAAGGTGTACCTTGGAGATATACCACTGAAGACAAAAGAGGGTGCAGTTCTGAAGCCAGAGTTGAAAAGGGA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CCCTGTCAGTACAAGAGTCAAGTTAAAGATTGTCCCCCATCTCCTCCGCTCTAGACAAGCTGCTGAAACGTTCC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CAGCCAACATTCAGGTGGTGTATGATGGACTTTTTGGTACAAATACAAATTCAAAGTTAAGAACATTATCCCTG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CAATTTGTGCATCATATTTGTATAACCTGTCCAGAAATCAAGATTAAGCCATTAGGTCCAATGCTTTTGAATGG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CCTCACCAAGCTAATCAATGAATACAAAGAGGACCCTAAACTACTGTCAATGGCATATTCAGCTGTTGGAAAAC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TCTCCAGTCGGATGCCACATTTATTCACTAAGGATATAGCGCTTGTGCAGCAGCTTTTTGAAGCCCTTTGCAAG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GAAGAGCCTGAGACTCGACTTGCTATTCAAGAAGCTTTATCTATGATGGTTGGAGCGTATAGTACTTTGGAAGG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GGCACAGCGAACTCTCATGGAGGCACTTGTGGCTTCGTACTTAATAAAGCCTGAAGTTCAAGTTCGACAAGTGG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CTGTGAAATTTGCCAGTACGGTGTTTCCCTCAGATCATATCCCTTCCAGATATTTGCTGCTACTGGCTGCAGGA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GATCCACGTGAAGAAGTTCATGGAGAAGCACAACGCGTATTAAGGTGTCTTCCAGGTAGAAACAGAAAAGAAAG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TACTTCTGAGCAGATGCCTTCCTTCCCAGAAATGGTTTATTACATCCAAGAAAAGGCTTCTCATCGAATGAAAA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CTCCAGTCAAGTACATGACCGGGACCACTGTCCTTCCATTTAACCCAGCAGCCTTTGGAGAGATCGTTCTGTAC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TTGCGCATGTGCCTTGCGCACAGTGCGGGGGTGGTGCCCACCTCTCAGAGTTTGGCTGATATGCAGGATCATGC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CCCAGCCATTGGGCGCTACATACGGACTTTAATGTCAAGCGGGCAGATGGCACCCTCATCATCTAACAAGAGTG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GGGAGACTAACCCTGTCCAGATCTACATTGGCCTGCTTCAGCAGCTGTTAGCAGGTGTTGGAGGTTTGCCGGTT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 ATGTACTGTCTATTGGAAGCTGTGTCAGTGTATCCAGAAAAGCTGGCTACCAAATTTGTAGACAAAACAGAATG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GATAAAGAGTCTGATGAATAACAGTAAAGAAGAAATGCGCGAACTGGCAGCGTTGTTTTATTCTGTAGTGGTAT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CAACAGTGTCGGGGAATGAGTTGAAATCAATGATAGAACAGCTTATAAAGACTACAAAAGACAATCACAGCCCG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GAGATACAGCATGGATCCTTGCTTGCATTGGGATTCACGGTGGGAAGGTATTTGGCTAAAAAGAAAATGAGAAT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GTCAGAGCAACAAGACCTGGAGAGAAATGCTGACACCCTCCCTGATCAAGAGGAACTCATTCAGAGTGCTACAG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 AAACAATAGGCTCATTTTTGGACAGTACATCACCCCTCCTGGCAATTGCTGCCTGCACAGCCCTGGGTGAAATT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GGCAGAAATGGTCCACTTCCAATCCCCAGTGAGGGATCTGGCTTTACCAAATTGCATCTTGTAGAAAGCTTACT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 AAGTAGAATACCTTCCAGTAAAGAAACAAATAAGATGAAAGAACGAGCAATCCAAACACTGGGATATTTTCCAG 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 TTGGGGATGGAGATTTTCCTCACCAGAAACTCCTCTTGCAAGGTCTGATGGATTCTGTGGAGGCCAAGCAGATA 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 GAACTTCAGTTCACTATTGGCGAAGCCATTACCAGTGCTGCAATAGGAACTAGTTCTGTGGCTGCCCGAGATGC 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 CTGGCAAATGACTGAAGAGGAATATACTCCACCTGCTGGAGCCAAAGTGAATGATGTGGTTCCATGGGTGTTGG 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 ATGTGATTTTAAATAAACATATCATCAGCCCCAACCCACACGTGAGGCAAGCAGCCTGCATCTGGCTCCTTTCC 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 CTTGTCAGGAAGCTAAGTACCCACAAAGAAGTGAAGTCTCATCTTAAAGAAATTCAAAGTGCATTTGTTTCAGT 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 TCTATCAGAAAATGATGAACTTAGCCAAGATGTTGCATCAAAGGGCCTTGGGTTGGTTTATGAACTAGGCAATG 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 AACAAGATCAACAGGAATTGGTTTCTACACTTGTGGAAACACTTATGACTGGCAAAAGAGTTAAACATGAAGTT 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 TCTGGAGAGACAGTGGTATTTCAAGGGGGAGCTCTTGGCAAAACACCAGATGGTCAGGGCCTTTCTACTTACAA 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 GGAACTTTGTTCTCTGGCAAGTGATCTTAGCCAGCCAGATCTGGTGTATAAATTTATGAATTTAGCCAACCATC 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 ATGCAATGTGGAACTCTAGGAAGGGTGCTGCTTTTGGTTTTAATGTAATTGCTACCAGAGCTGGAGAGCAGCTG 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 GCTCCTTTTCTGCCTCAGCTAGTTCCTCGACTTTATCGTTACCAGTTTGATCCCAACCTTGGCATTCGACAGGC 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 CATGACAAGTATTTGGAATGCGTTGGTCACTGACAAATCCATGGTGGATAAATATTTGAAAGAAATTCTTCAAG 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 ATTTGGTTAAGAACCTTACAAGCAATATGTGGCGAGTTCGAGAATCCAGCTGTTTAGCTTTGAATGATTTATTG 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 AGAGGAAGACCCTTAGATGACATCATTGATAAACTTCCAGAAATTTGGGAAACGCTTTTTAGAGTACAAGATGA 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 TATCAAGGAATCTGTACGAAAAGCGGCAGAACTAGCTCTGAAAACTCTGAGCAAGGTCTGTGTGAAAATGTGTG 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 ACCCTGCCAAAGGAGCAGCTGGCCAGAGAACCATCGCTGCCCTTCTGCCTTGCCTTCTGGACAAAGGAATGATG 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 AGCACCGTGACGGAAGTTCGAGCCCTCAGCATTAACACCCTTGTGAAGATCAGCAAAAGTGCAGGAGCCATGTT 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 GAAACCGCATGCACCAAAACTCATTCCAGCTCTGCTAGAGTCCTTAAGTGTATTGGAGCCCCAAGTTCTCAATT 3922
Query 1 --------------------------------------ATGGATAGTGCTCGGCTTAGTGCTGCCAAATCTTCT 36
||||||||||||||||||||||||||||||||||||
Sbjct 3923 ATTTGAGCCTCCGGGCGACAGAGCAAGAAAAGGCTGCGATGGATAGTGCTCGGCTTAGTGCTGCCAAATCTTCT 3996
Query 37 CCAATGATGGAAACAATCAACATGTGCCTGCAATACCTTGATGTGTCAGTGCTGGGCGAGCTAGTTCCTAGGTT 110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3997 CCAATGATGGAAACAATCAACATGTGCCTGCAATACCTTGATGTGTCAGTGCTGGGCGAGCTAGTTCCTAGGTT 4070
Query 111 GTGTGAACTGATCAGAAGTGGTGTAGGTCTTGGAACTAAGGGTGGCTGTGCCAGTGTCATTGTGTCATTAACTA 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4071 GTGTGAACTGATCAGAAGTGGTGTAGGTCTTGGAACTAAGGGTGGCTGTGCCAGTGTCATTGTGTCATTAACTA 4144
Query 185 CTCAGTGTCCTCAGGACCTAACACCTTACTCAGGTAAACTTATGAGTGCTTTGCTGAGTGGCCTGACAGATCGG 258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4145 CTCAGTGTCCTCAGGACCTAACACCTTACTCAGGTAAACTTATGAGTGCTTTGCTGAGTGGCCTGACAGATCGG 4218
Query 259 AACAGTGTGATTCAGAAATCTTGTGCATTTGCTATGGGCCATTTAGTTCGGACCTCACGGGATAGCAGCACTGA 332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4219 AACAGTGTGATTCAGAAATCTTGTGCATTTGCTATGGGCCATTTAGTTCGGACCTCACGGGATAGCAGCACTGA 4292
Query 333 AAAACTCCTGCAGAAGCTCAATGGGTGGTATATGGAGAAAGAAGAACCTATCTACAAGACCTCTTGTGCTTTGA 406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4293 AAAACTCCTGCAGAAGCTCAATGGGTGGTATATGGAGAAAGAAGAACCTATCTACAAGACCTCTTGTGCTTTGA 4366
Query 407 CTATTCATGCTATTGGACGATACAGCCCTGATGTATTAAAGAATCATGCAAAAGAAGTCCTGCCTCTGGCATTT 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4367 CTATTCATGCTATTGGACGATACAGCCCTGATGTATTAAAGAATCATGCAAAAGAAGTCCTGCCTCTGGCATTT 4440
Query 481 TTAGGCATGCATGAAATTGCTGATGAGGAGAAATCCGAAAAAGAAGAATGTAATTTATGGACCGAAGTGTGGCA 554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4441 TTAGGCATGCATGAAATTGCTGATGAGGAGAAATCCGAAAAAGAAGAATGTAATTTATGGACCGAAGTGTGGCA 4514
Query 555 GGAAAACGTACCTGGATCCTTTGGTGGCATTCGATTATACCTGCAGGAGTTAATTACTATTACCCAGAAGGCTT 628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4515 GGAAAACGTACCTGGATCCTTTGGTGGCATTCGATTATACCTGCAGGAGTTAATTACTATTACCCAGAAGGCTT 4588
Query 629 TGCAGTCTCAGTCCTGGAAAATGAAAGCCCAGGGTGCAATTGCCATGGCATCAATTGCAAAACAGACTAGCTCT 702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4589 TGCAGTCTCAGTCCTGGAAAATGAAAGCCCAGGGTGCAATTGCCATGGCATCAATTGCAAAACAGACTAGCTCT 4662
Query 703 CTAGTACCTCCATATCTCGGAATGATACTGACCGCATTGCTGCAAGGCCTGGCTGGAAGAACGTGGGCAGGAAA 776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4663 CTAGTACCTCCATATCTCGGAATGATACTGACCGCATTGCTGCAAGGCCTGGCTGGAAGAACGTGGGCAGGAAA 4736
Query 777 GGAGGAGCTATTGAAAGCCATTGCCTGTGTGGTGACAGCTTGCAGTGCAGAGCTGGAAAAGTCTGTGCCCAATC 850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4737 GGAGGAGCTATTGAAAGCCATTGCCTGTGTGGTGACAGCTTGCAGTGCAGAGCTGGAAAAGTCTGTGCCCAATC 4810
Query 851 AACCCAGCACAAATGAAATTCTTCAAGCTGTTCTGAAGGAATGTAGCAAAGAGAATGTCAAATACAAGATTGTA 924
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4811 AACCCAGCACAAATGAAATTCTTCAAGCTGTTCTGAAGGAATGTAGCAAAGAGAATGTCAAATACAAGATTGTA 4884
Query 925 GCAATCAGCTGTGCAGCTGATATCTTGAAGGCCACCAAAGAGGACAGATTCCAGGAGTTCTCTAACATTGTCAT 998
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4885 GCAATCAGCTGTGCAGCTGATATCTTGAAGGCCACCAAAGAGGACAGATTCCAGGAGTTCTCTAACATTGTCAT 4958
Query 999 ACCTCTCATCAAGAAGAACTCACTTGAAAGCAGTGGGGTCCGGACAACCAAAAATGAAGAGGAGAATGAAAAGG 1072
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4959 ACCTCTCATCAAGAAGAACTCACTTGAAAGCAGTGGGGTCCGGACAACCAAAAATGAAGAGGAGAATGAAAAGG 5032
Query 1073 AAAAGGAGCTCCAGCTGGAATATCTGCTGGGTGCCTTTGAAAGCCTGGGCAAAGCCTGGCCGCGAAACGCGGAG 1146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5033 AAAAGGAGCTCCAGCTGGAATATCTGCTGGGTGCCTTTGAAAGCCTGGGCAAAGCCTGGCCGCGAAACGCGGAG 5106
Query 1147 ACCCAACGTTGTTATCGTCAGGAGCTGTGCAAACTGATGTGTGAACGGCTAAAACTCAGCACGTGGAAAGTGCA 1220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5107 ACCCAACGTTGTTATCGTCAGGAGCTGTGCAAACTGATGTGTGAACGGCTAAAACTCAGCACGTGGAAAGTGCA 5180
Query 1221 GCTAGGAGTCCTGCAATCAATGAATGCCTTTTTTCAGGGGTTAATGCTTTTGGAAGAAGAACATGCCGATCCTG 1294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5181 GCTAGGAGTCCTGCAATCAATGAATGCCTTTTTTCAGGGGTTAATGCTTTTGGAAGAAGAACATGCCGATCCTG 5254
Query 1295 AGGCTTTGGCTGAAATTCTGCTTGAAACTTGTAAATCAATCACATATTCTTTAGAAAATAAGACCTACTCATCT 1368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5255 AGGCTTTGGCTGAAATTCTGCTTGAAACTTGTAAATCAATCACATATTCTTTAGAAAATAAGACCTACTCATCT 5328
Query 1369 GTGAGAACAGAAGCTTTATCTGTGATAGAATTGCTGCTTAAAAAACTTGAAGAATCTAAACAGTGGGAATGTTT 1442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5329 GTGAGAACAGAAGCTTTATCTGTGATAGAATTGCTGCTTAAAAAACTTGAAGAATCTAAACAGTGGGAATGTTT 5402
Query 1443 GACATCTGAATGCAGAGTGCTCCTAATTGAGTCTTTAGCTACTATGGAGCCAGACAGCAGACCTGAACTGCAGG 1516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5403 GACATCTGAATGCAGAGTGCTCCTAATTGAGTCTTTAGCTACTATGGAGCCAGACAGCAGACCTGAACTGCAGG 5476
Query 1517 AGAAAGCAGCGTTACTGAAGANAAACACTTGAAAATCTGGAA 1558
||||||||||||||||||||| ||||||||||||||||||||
Sbjct 5477 AGAAAGCAGCGTTACTGAAGA-AAACACTTGAAAATCTGGAA 5517
