Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_14107
- Subject:
- NM_001097621.1
- Aligned Length:
- 5644
- Identities:
- 510
- Gaps:
- 5036
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGTCGGCCGCGGCGCCTCCTTGTGTGCGGTGCAGCCCGCGGTGGCTGAGTGCGGCCCGGCTCGAGAGACCCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCCACTTGAGGTATCCCCGCGCAAGAGGCTGCCCGCCGGGCTCGATCAAGACCCATGCAGCAGCCGCCCTGCTC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CGGAGGGCGCCGGGGCCAGCGCTGAGCAGAGCCACTCGGCCGGTGGGGGCGGGTGGTGCCGCCACTGCCACACG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AAGCTCGTGGAGCTAAAACGACAGGCGTGGAAGTTGGTCAGCGGGCCCGGGACTCCTCTCCGGGATCCTTGCCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTCTACCTTGCTGCTTGACAAGCTCCCGGCCTCTGGGGTTCAGCCGGCATGCCGCCCTGACACCGAGAGCCGCT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GTGACGTATGTACCACGCATCTGCACCAGCTCACTCGGGAAGCCCTGCGCCTGTTACAGACACCTGCCAGTCAC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GAGGACCCCAATGCTTCCCGAGGAGGCCTTGCGGCTCCCAGCTCCAGGGACCCACCTGGACCCGTGGGCCTCAT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGGGAGGCAGCCCCCTGTGGGACCTGACAGGAGGAAGGCAACGGCTTGGCCACCTGGCCCCAGCGTCCAGGTGT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CGGTGGCACCAGCAGGCCTTGGGGGAGCATTGAGTACAGTCACCATCCAGGCCCAGCAGTGCTTGGAGGGTGTG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TGGAGCCTCTCAAGGGTCAACAGCTTCTTGCCACCCACTTGCCTGGCTGAGGCAGCTGTAGCTGCGGTGGCTGT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGCCGACACTGTCCGAGACTGTGCTCCAGCAGCAGGCCCTGAACGTATGTCGAAGGCGTGGGGCCGAGGGGCAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CATGCACTACAGCCCTGGTTACCCCAGCCCCAGGCACCTCAGCAGGGGGTTCCACAGGCCCGTCTGCAGCGGCC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TCTTTCTTTATAAGGGCTGCCCAGAAGCTCAGCCTGGCCTCCAAGCGCAAGAAGCATCACCCGCCGCCTGCGCC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CTCCACCCGAGGCACATCCACTTACCCCACCGACTTCAGTGGCTCTCTGCAGCTGTGGCCGCCCCCGGTGCCCC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CCTGCCTGCTCAGGGCTGCCTCCAAGGCCAAGGAAAACCCCAGCAGCTTCGGAAAGGTGAAGGTTATGCTGCGC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ATATGGCCGGCACAAGGAGTCCAGCGCTCAGCCGAGTCCACATCCTTCCTGAAGGTGGATTCTCGCAAGAAGCA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GGTGACTCTCTATGACCCCGCTGCCGGGCCTCCAGGCTGTGCAGGACTCCGGCACGCCCCCACCGCACCAGTCC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CCAAGATGTTTGCTTTTGATGCCATCTTCCCCCAGGACTCGGAGCAGGCTGAGGTCTGCTCAGGGACAGTGGCT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GACGTGCTCCAGTCTGTGGTCAGTGGAGCTGATGGCTGCATTTTTTCCTTTGGCCACATGAGCCTCGGCAAATC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 ATACACCATGATTGGGAAGGACAGCTCACCCCAGAGCCTGGGCATCGTGCCCTGTGCTATCTCCTGGCTCTTCA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GGCTTATTGACGAACGCAAGGAGAGGCTGGGCACGCGCTTCTCCATCCGCGTGTCTGCCGTGGAAGTGTGCGGC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CACGACCAGAGTCTGCGGGACCTGCTTGCCGAGGTGGCTTCAGGCAGCCTTCAGGACACCCAATCTCCGGGCGT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GTACCTCCGGGAGGACCCTGTGTGTGGGACACAGCTCCAGAACCAGAACGAGCTGCGTGCACCCACAGCAGAGA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AGGCGGCCTTCTACCTGGACGCGGCCCTGGCAGCCCGCAGCACCAGCCGTGCCGGCTGCGGGGAGGAAGCCCGG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CGAAGCTCCCATATGCTCTTCACCCTGCACGTGTACCAGTACCGTGTGGAGAAGTGTGGCCAAGGAGGAATGTC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TGGAGGTCGTAGCCGCCTGCACCTGATCGACCTGGGCAGCTGCGACGCAGCCGTCGGCAGAGGAGGAGAAGCCT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CAGGGGGACCCCTCTGTCTGTCTCTGTCAGCTCTGGGCAGTGTCATTCTGGCCCTGGTCAACGGGGCCAAGCAT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GTGCCCTACAGGGACCACAGACTCACCATGTTACTGCGGGAGTCCCTGGCTACCACCAATTGCCGCACCACTAT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GATCGCGCACATCTCAGACTCTCCAGCTCACCACGCAGAGACACTCAGCACGGTGCAGCTGGCTGCCCGCATCC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 ACCGCCTGCGCAGGAAGAAGGGCAAGCATGCATCCAGTTCCTCAGGAGGAGAGAGCTCCTGTGAGGAGGGCCGA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GCCCGCCGTCCCCCACACCTTCGGCCCTTCCACCCACGGGCCGTGGTGTTGGACCCCGACCGCTCGGCTCCTGG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 CCTGTCCGGAGACCCCGATTACTCATCCAGCAGTGAGCAGTCCTGCGACACGGTCATCTATGTGGGTCCCGGTG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 GGATGGCACTGTCAGACCGTGAGCTCACGGACAACGAGGGCCCACCTGACTTCGTGCCCATCATCCCCGCTCTG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 AGCCGACGCAGGCCCTCCGAGGGGCCCCGGGACGCTGACCACTTCCGCTGCAGTACGTTCGCCGAGCTGCAGGA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GCGTCTGGAGTGCATAGATGGCAGCGAGGCATTCCCTGGCCCCCAGGGTGGCTCTGACGGAGCCCAAGCCAGCC 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 CTGCCCGGGGAGGCAGGAAACCCTCGTTACCTGAGGCCACACCCTCCAGGAAGGCTGTGGCCCCCACAGTGGTC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 ACCAGTTGCCCTCGAGGCAGCCCTGGGCACGATACTCACCGGAGCGCCTCAGACCCCTCTAAGACTGGTACACA 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 GAGTGAGCAGAGAGTAGATGGTTCCCGGCCTGAGCCACCTGCTTCAGACAAGACCTCAGGAGGCGGGGGCAGGA 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 GGCCACTGCCCAGTCCAGCCCCTCCACCGCCTCGCCAGCCGGAAGCTCAAGGCATCCCCAAAGAACCTGGGGGA 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GAGGGTACTGACAGCGTGCTGCGGACACCCCCAGTGGGCATGAGTGGACAGGCGGCCTTGCCCCCGTTGCTCTC 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 AGACTCGGCTTATCTCTCCCCGTCGGCTCGTGGACGCCATCTGGAGAGAGGCCTGCTGACCACCACGGTGACCT 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 TGCAGCAACCGGTGGAACTCAATGGCGAGGATGAGTTGGTGTTCACGGTGGTAGAGGAGCTACCTCTGGGCGGA 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 CTTGCAGGGGCCACACGGCCCTCCAGTCTGGCCAGCATGAGCAGCGACTGCTCCCTGCAGGCTTTGGCTTCAGG 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 GTCCAGGCCAGTCAGTATCATCAGTAGCATCAATGACGAGTTTGATGCTTATACCTCACAGATGTCTGAGGGTC 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 CCGGAGACCCCGGGGAGTTCCCAGAGGGAACAGCGTGGGCTGGCGGCAGTCCAGCCTCCTCCATTGGCTCTTGG 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 CTGAGCGACGTTGGTGTCTGCTTGTCTGAAAGCCGTGGTCCCACACCACAGCCTCCCTTCAGCCCCAACTCTGC 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 AGCAGGGCCAGGTCCACCAGAGTTTCCTACCCCAGGCAGCTCCCTAGAGGAAAGCAAGGTCAGGTCCTCAGAGT 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 GTGGAAGACCAGACAATCCCGGCTCAGCCCGGAGTCTCCACCCTGGAGAAGCAGTTGCAACAACTCAGACCCAA 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 CCTGGCAGAGAGCCTTGGGCCAGGTCCCCGCATGAGGTAGCCTCAGCCCAGACTATCCACTCCAGCCTGCCTCG 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 GAAACCCAGGACTACCTCCACAGCCAGCCGAGCTCGTCCTAGCCGGGGACCATACAGCCCTGGTGGCCTGTTTG 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 AGGACCCTTGGCTGCTCCGGGCAGAGGACTGTGACACGCGCCAGATAGCCTCTACGGGCAGAGCCCCAAGCCCA 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 ACCCCAGGCTCCCCTCGATTGCCTGAGACTCAGATGATGCTGGCTTGTGCCCAGAGAGTGGTAGATGGGTGTGA 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 GGTGGCATCCAGAATGTCGCGGAGACCAGAGGCTGTGGCTCGGATCCCACCTTTGCGGAGGGGGGCCACCACAC 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 TAGGAGTGACCACACCTGCTGCATCCTGTGGGGACGCTCCAGCAGAGGCAGTGGTCCATTCAGGAAGCCTGAAG 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 ACCACCTCGGGCAGTAAGAAGAGTGTTTCTCCCAAGGGGGCCTTCTTTCCAAGGCCTAGTGGGGCAGGGCCTCC 4070
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4071 AGCCCCACCTGTGCGCAAGTCGAGCCTGGAGCAGAGCACGGCCCTCACCCCCACCCAGGCCCTGGGACTGACCA 4144
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4145 GGGCAGGGGCTCCTTCTGCCTTCCGAGGGGAGGAGGAAGCCAGGCCTAGTGGTCGGTCTGATTCCTCTGTTCCC 4218
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4219 AAGGCCACATCCAGCCTGAAAGCCCGAGCTGGCAAGATGGACGTGCCATACCGTCCCTCTGGCCACATGTCCCT 4292
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4293 GGAACGGTGTGAGGGCCTGGCACATGGCAGCAGTAAGGTCAGAGATGTCGTAGGACGGCCACCAAGGGCTGTGC 4366
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4367 CCAGGTTGGGTGTACCATCCGCCAGCCCTCCACTTGGACCAGCTCCTGCCTGTAGGAACAGCCCAGCCAAGGGT 4440
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4441 GTTGGAGCAACCAAGCCTCCTGCTGGTGGAGCTAAGGGTCGTAATCTGGGGCCAAGTACATCTCGGGCTCTGGG 4514
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4515 TGCTCCGGTGAAGCCACTAGGGCCTGTGGCAGGCAAGACAGCTGGTGGCGCTGTGCCAGGACCCCGAGCTGCTC 4588
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4589 CACGGGCTGTGCCGGGTATTGGGGCCAAGGCCGGTCGGGGCACCATCATGGGCACTAAGCAGGCATTTCGGGCT 4662
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4663 GCCCATAGCCGTGTCCACGAATTGGCAGCCAGTGGATCTCCTAGTAGAGGTGGCCTCTCCTGGGGCTCGACGGA 4736
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4737 CTCGGACAGCGGCAACGACAGCGGTGTGAACCTGGCTGAAGAGCGGCAGCCCTCGAGCCCTGCCCTGCCCTCCC 4810
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4811 CTTACAGCAAAGTGACCGCTCCGAGGAGACCCCAGCGCTACAGCAGTGGCCATGGCAGTGACAACAGCAGCGTG 4884
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4885 CTGAGCGGCGAGCTGCCCCCCGCCATGGGCCGCACTGCTCTTTTCTACCACAGTGGCGGCAGCAGTGGCTACGA 4958
Query 1 -------------------------------------------------------ATGAGCAAGAGTGGGGGTG 19
|||||..|||||||....|
Sbjct 4959 GAGCATGATTCGGGACAGCGAGGCCACTGGCAGTGCCTCCTCAGCTCCAGACTCCATGAGTGAGAGTGGAACGG 5032
Query 20 CCTCCCCAGGCGCCCGCACCCGCAGCCTCAAGTCCCCCAAGAAGAGGGCCACAGGTCTGCAGCGGCGGCGCCTG 93
||||||..||.||||||.|||||||||||||||||||.||||||||.|||||||||||.||||||.||.|.|||
Sbjct 5033 CCTCCCTGGGTGCCCGCTCCCGCAGCCTCAAGTCCCCGAAGAAGAGAGCCACAGGTCTACAGCGGAGGAGGCTG 5106
Query 94 ATTCCCGCCCCACTGCCCGACACCACTGCCCTGGGCCGTAAGCCCAGCCTCCCCGGGCAGTGGGTGGACCTGCC 167
||.||.||||||||.||.|||.|..||||..|.|||||.||||||||||||||||||||.|||||||||.||||
Sbjct 5107 ATCCCGGCCCCACTTCCTGACGCTGCTGCTTTAGGCCGCAAGCCCAGCCTCCCCGGGCAATGGGTGGACTTGCC 5180
Query 168 CCCGCCCCTGGCTGGCTCCCTGAAGGAGCCGTTCGAGATCAAGGTGTACGAGATCGATGACGTGGAGCGCCTTC 241
||||||||||||.|||||.|||||||||||.||.|||||||||||||||||.||.||||||||||||||.||.|
Sbjct 5181 CCCGCCCCTGGCCGGCTCTCTGAAGGAGCCTTTTGAGATCAAGGTGTACGAAATAGATGACGTGGAGCGTCTGC 5254
Query 242 AGCGGCCCCGCCCCACCCCGAGGGAG------GCC---CCCACCC------------AGGGTCTGGCGTGCGTC 294
||||||.|||.|...|.|.||||||| ||| |||.||| ||||.|..|.||||.||
Sbjct 5255 AGCGGCACCGGCTGCCTCTGAGGGAGAATGAAGCCAAGCCCTCCCAGGACGCAGAGAAGGGCCCAGTGTGCATC 5328
Query 295 AG-TACAAGGCTGCGGCTGGCGGAGCGCAGGCAGCAGCGGCTGCGGGAGGTGCAGGCCAAGCACAAGCACCTGT 367
|| |.||| ||||||.||.||.|||||||||||||||||.||||.|||.|||||||||||.|...|.|||||.|
Sbjct 5329 AGCTCCAA-GCTGCGTCTCGCAGAGCGCAGGCAGCAGCGACTGCAGGAAGTGCAGGCCAAACGTGACCACCTCT 5401
Query 368 GTGAGGAGCTGGCCGAGACCCAGGGCCGGCTGATGCTGGAGCCTGGCCGCTGGCTGGAGCAGTTTGAGGTGGAC 441
|.|||||||||||.|||||||||||||||||||||.||||.|||||.||||||||.||||||||||||||||||
Sbjct 5402 GCGAGGAGCTGGCTGAGACCCAGGGCCGGCTGATGGTGGAACCTGGGCGCTGGCTAGAGCAGTTTGAGGTGGAC 5475
Query 442 CCGGAGCTGGAGCCCGAGTCGGCCGAGTACCTGGCGGCCCTGGAGCGAGCCACGGCGGCCCTGGAGCAGTGCGT 515
||.|||||||||||.|||||.||.||.||.||||.|||||||||||.||||||.||.|||||||||||||||||
Sbjct 5476 CCAGAGCTGGAGCCAGAGTCAGCTGAATATCTGGTGGCCCTGGAGCAAGCCACAGCTGCCCTGGAGCAGTGCGT 5549
Query 516 GAACCTGTGCAAGGCGCACGTCATGATGGTCACCTGCTTCGACATCAGCGTTGCAGCCAGTGCTGCCATCCCGG 589
.||||||||||||||.||.||||||||||||||||||||.|||||..|.|||||.||||...||||..|.||.|
Sbjct 5550 TAACCTGTGCAAGGCCCATGTCATGATGGTCACCTGCTTTGACATTGGAGTTGCTGCCACCACTGCTGTACCTG 5623
Query 590 GGCCGCAGGAGGTGGACGTC 609
||||.||.||||||||.||.
Sbjct 5624 GGCCACAAGAGGTGGATGTT 5643
