Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_14160
- Subject:
- XM_011242711.1
- Aligned Length:
- 1272
- Identities:
- 758
- Gaps:
- 441
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGACCATTCTAATAGGGAAAAGGATGATAGACAACGGACAACTAAAACCATGGCACAAAGGAATACACACTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTCGAGACCATCTGGCACTTCAACATCCTCTGGGGTTCTCATGGTGGGACCCAACTTCAGGGTTGGCAAGAAGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TAGGGTGTGGGAACTTCGGAGAGCTCAGATTAGGTAAAAATCTCTACACCAATGAATATGTAGCCATTAAACTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GAACCAATAAAATCACGTGCTCCACAACTTCATTTAGAGTACAGGTTTTATAAACAGCTTGGCAGTGCAGGTGA 296
Query 1 -------------------------------------------------ATGGTGCTGGAGCTCCTTGGCCCTA 25
|||||||||||.|||||||||||||
Sbjct 297 AGGCCTCCCACAGGTTTATTACTTTGGACCATGTGGGAAGTACAATGCCATGGTGCTGGAACTCCTTGGCCCTA 370
Query 26 GCTTGGAGGACTTGTTTGACCTCTGTGACCGAACATTTACTTTGAAGACGGTGTTAATGATAGCCATCCAGCTG 99
|||||||.||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||.||
Sbjct 371 GCTTGGAAGACTTGTTTGACCTCTGTGACCGAACGTTTACTTTGAAGACGGTGTTAATGATAGCCATCCAGTTG 444
Query 100 CTTTCTCGAATGGAATACGTGCACTCAAAGAACCTCATTTACCGAGATGTCAAGCCAGAGAACTTCCTGATTGG 173
||||||||||||||.||.||.|||||||||||.||.|||||||||||||||||.||||||||||||.|||||||
Sbjct 445 CTTTCTCGAATGGAGTATGTACACTCAAAGAATCTTATTTACCGAGATGTCAAACCAGAGAACTTCTTGATTGG 518
Query 174 TCGACAAGGCAATAAGAAAGAGCATGTTATACACATTATAGACTTTGGACTGGCCAAGGAATACATTGACCCCG 247
.||||||||||||||||||||||||||.||||||||||||||.||||||||||||||||||||..||||.||.|
Sbjct 519 CCGACAAGGCAATAAGAAAGAGCATGTAATACACATTATAGATTTTGGACTGGCCAAGGAATATGTTGATCCTG 592
Query 248 AAACCAAAAAACACATACCTTATAGGGAACACAAAAGTTTAACTGGAACTGCAAGATATATGTCTATCAACACG 321
||||||||||||||||||||||.||.||.|||||||||||.|||||||||||.|||||.||||||||||||||.
Sbjct 593 AAACCAAAAAACACATACCTTACAGAGAGCACAAAAGTTTGACTGGAACTGCGAGATACATGTCTATCAACACA 666
Query 322 CATCTTGGCAAAGAGCAAAGCCGGAGAGATGATTTGGAAGCCCTAGGCCATATGTTCATGTATTTCCTTCGAGG 395
|||||.||||||||||||||||||.|||||||||||||||||.|||||||||||||||||||.|||||.|||||
Sbjct 667 CATCTAGGCAAAGAGCAAAGCCGGCGAGATGATTTGGAAGCCTTAGGCCATATGTTCATGTACTTCCTCCGAGG 740
Query 396 CAGCCTCCCCTGGCAAGGACTCAAGGCTGACACATTAAAAGAGAGATATCAAAAAATTGGTGACACCAAAAGGA 469
||||||.|||||||||||||||||||||||.||||||||||||||||||||||||||.|||||.||||||||||
Sbjct 741 CAGCCTACCCTGGCAAGGACTCAAGGCTGATACATTAAAAGAGAGATATCAAAAAATCGGTGATACCAAAAGGA 814
Query 470 ATACTCCCATTGAAGCTCTCTGTGAGAACTTTCCAGAGGAGATGGCAACCTACCTTCGATATGTCAGGCGACTG 543
||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|.
Sbjct 815 ATACTCCCATCGAAGCTCTCTGTGAGAACTTTCCAGAGGAGATGGCAACCTACCTTCGATATGTCAGGCGATTA 888
Query 544 GACTTCTTTGAAAAACCTGATTATGAGTATTTACGGACCCTCTTCACAGACCTCTTTGAAAAGAAAGGCTACAC 617
||||||||||||||||||||||||||||||||||||||||||||||||||.||.||||||..|||||||||.||
Sbjct 889 GACTTCTTTGAAAAACCTGATTATGAGTATTTACGGACCCTCTTCACAGATCTGTTTGAACGGAAAGGCTATAC 962
Query 618 CTTTGACTATGCCTATGATTGGGTTGGGAGACCTATTCCTACTCCAGTAGGGTCAGTTCACGTAGATTCTGGTG 691
|||||||||||||||||||||||||||.||.||||||||||||||||||||.||||||||.|||||||||||||
Sbjct 963 CTTTGACTATGCCTATGATTGGGTTGGAAGGCCTATTCCTACTCCAGTAGGATCAGTTCATGTAGATTCTGGTG 1036
Query 692 CATCTGCAATAACTCGAGAAAGCCACACACATAGGGATCGGCCATCACAACAGCAGCCTCTTCGAAATCAGGTG 765
|||||||||||||||||||||||||||||||.||||||||||||||||||||.|||||||||.||||||||.|.
Sbjct 1037 CATCTGCAATAACTCGAGAAAGCCACACACACAGGGATCGGCCATCACAACAACAGCCTCTTAGAAATCAGCTA 1110
Query 766 GTTAGCTCAACCAATGGAGAGCTGAATGTTGATGATCCCACGGGAGCCCACTCCAATGCACCAATCACAGCTCA 839
||| .||| |.|| ||| |.|| |||.|||..
Sbjct 1111 GTT-TCTC------------------TTTT-------------------ACT----TTCA-----CACTGCTTT 1137
Query 840 TGCCGAGGTGGAGGTA------GTGGAGGAAGCTAAGTGCTGCTGTTTCTTTAAGAGGAAAAGGAAGAAGACTG 907
|.|..|..|..|..|| ||| |..||| || |||.|.|.|..|
Sbjct 1138 TTCAAAAATTTACTTACTTTATGTG--------TGTGTG-TG-TGTGTGTGTGTG------------------- 1182
Query 908 CTCCGCGCCACAAG 921
Sbjct 1183 -------------- 1182
