Construct: ORF ccsbBroadEn_14160

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF016550.1_s300c1, BRDN0000385764
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CSNK1G1 (53944)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 53944 CSNK1G1 casein kinase 1 gamma 1 NM_001329606.2 72.6% 72.5% 1_345del;1256A>C
2 human 53944 CSNK1G1 casein kinase 1 gamma 1 NM_022048.5 72.6% 72.5% 1_345del;1256A>C
3 human 53944 CSNK1G1 casein kinase 1 gamma 1 NM_001329607.2 67% 66.2% (many diffs)
4 human 53944 CSNK1G1 casein kinase 1 gamma 1 NM_001329605.2 61.9% 61.2% (many diffs)
5 mouse 214897 Csnk1g1 casein kinase 1, gamma 1 XM_011242710.1 68.1% 72% (many diffs)
6 mouse 214897 Csnk1g1 casein kinase 1, gamma 1 XM_011242709.1 66.8% 70.4% (many diffs)
7 mouse 214897 Csnk1g1 casein kinase 1, gamma 1 NM_173185.2 62.6% 66.2% (many diffs)
8 mouse 214897 Csnk1g1 casein kinase 1, gamma 1 XM_011242708.1 62.6% 66.2% (many diffs)
9 mouse 214897 Csnk1g1 casein kinase 1, gamma 1 XM_017313273.1 61.8% 63.1% (many diffs)
10 mouse 214897 Csnk1g1 casein kinase 1, gamma 1 XM_006511008.2 61.5% 64.8% (many diffs)
11 mouse 214897 Csnk1g1 casein kinase 1, gamma 1 XM_011242703.1 61.5% 64.8% (many diffs)
12 mouse 214897 Csnk1g1 casein kinase 1, gamma 1 XM_011242704.1 61.5% 64.8% (many diffs)
13 mouse 214897 Csnk1g1 casein kinase 1, gamma 1 XM_011242705.1 61.5% 64.8% (many diffs)
14 mouse 214897 Csnk1g1 casein kinase 1, gamma 1 XM_011242706.1 61.5% 64.8% (many diffs)
15 mouse 214897 Csnk1g1 casein kinase 1, gamma 1 XM_011242707.1 61.5% 64.8% (many diffs)
16 mouse 214897 Csnk1g1 casein kinase 1, gamma 1 XM_011242711.1 59.5% 59.6% (many diffs)
17 mouse 214897 Csnk1g1 casein kinase 1, gamma 1 XM_011242712.1 58.7% 61.8% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
987
ORF length:
921
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGT GCTGGAGCTC CTTGGCCCTA GCTTGGAGGA CTTGTTTGAC CTCTGTGACC
121GAACATTTAC TTTGAAGACG GTGTTAATGA TAGCCATCCA GCTGCTTTCT CGAATGGAAT
181ACGTGCACTC AAAGAACCTC ATTTACCGAG ATGTCAAGCC AGAGAACTTC CTGATTGGTC
241GACAAGGCAA TAAGAAAGAG CATGTTATAC ACATTATAGA CTTTGGACTG GCCAAGGAAT
301ACATTGACCC CGAAACCAAA AAACACATAC CTTATAGGGA ACACAAAAGT TTAACTGGAA
361CTGCAAGATA TATGTCTATC AACACGCATC TTGGCAAAGA GCAAAGCCGG AGAGATGATT
421TGGAAGCCCT AGGCCATATG TTCATGTATT TCCTTCGAGG CAGCCTCCCC TGGCAAGGAC
481TCAAGGCTGA CACATTAAAA GAGAGATATC AAAAAATTGG TGACACCAAA AGGAATACTC
541CCATTGAAGC TCTCTGTGAG AACTTTCCAG AGGAGATGGC AACCTACCTT CGATATGTCA
601GGCGACTGGA CTTCTTTGAA AAACCTGATT ATGAGTATTT ACGGACCCTC TTCACAGACC
661TCTTTGAAAA GAAAGGCTAC ACCTTTGACT ATGCCTATGA TTGGGTTGGG AGACCTATTC
721CTACTCCAGT AGGGTCAGTT CACGTAGATT CTGGTGCATC TGCAATAACT CGAGAAAGCC
781ACACACATAG GGATCGGCCA TCACAACAGC AGCCTCTTCG AAATCAGGTG GTTAGCTCAA
841CCAATGGAGA GCTGAATGTT GATGATCCCA CGGGAGCCCA CTCCAATGCA CCAATCACAG
901CTCATGCCGA GGTGGAGGTA GTGGAGGAAG CTAAGTGCTG CTGTTTCTTT AAGAGGAAAA
961GGAAGAAGAC TGCTCCGCGC CACAAGTGCC CAACTTTCTT GTACAAAGTt ggcattataa
1021gaaagcattg cttatcaatt tgttgcaacg aac

Download FASTA (ORF) (Full)