Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_14172
- Subject:
- NR_160928.1
- Aligned Length:
- 2153
- Identities:
- 523
- Gaps:
- 1618
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTGGGTGTTGGTGCTAGCGCGGCTTCCCGGCGCTCGTGGAATCTTCTGGAGCCCTTTTCTCCACTCAGCGAGCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGAGAGTGCGGAAGTCTCCGGCTGGTGGGGCATGGCCCAGGAGCACTGCAAGTCCTAGGGTTCCCAAACCTGTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGGTGGCCGCCTGGGCCCGCGAGGGCGGGAAGGGCTCGAGTACAGTGACCCAGCGGGAGCTGTGTGTGAACGGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AAAGCTCTTGGAACAGTCTTGCCCCCCCCCCCCCCCCTCTTACGGGCGCCTCTTCTCTTTTTGGGAACGTGGCG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGCAAAAAATGCTTGAGCCAGAGTGATGATGCGGGTGTGCTGGTTGGTGAGACAGGACAGCCGGCACCAGCGAA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCAGACTTCCACATTTGGAAGCAGTTGTGATTGGGCGTGGCCCAGAGACCAAGATCACTGATAAGAAATGTTCT 444
Query 1 -------------------ATGGTGAATG-AAC------TTTATCCATATATTGTAGAGTTTGAGGAAGAGGCA 48
|.|..||.|| ||| |.|.||.|..||..|.|||||||||||||||||||
Sbjct 445 CGACAGCAAGTACAGTTGAAAGCAGAGTGTAACAAGGGATATGTCAAGGTAAAGCAGAGTTTGAGGAAGAGGCA 518
Query 49 AAGAACCCTGGCCTGGAAACACACAGGAAGAGAAAGAGATCAGGCAACAGTGATTCTATAGAAAGGGATGCTGC 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 AAGAACCCTGGCCTGGAAACACACAGGAAGAGAAAGAGATCAGGCAACAGTGATTCTATAGAAAGGGATGCTGC 592
Query 123 TCAGGAAGCTGAGGCTGGGACAGGGCTGGAACCTGGGAGCAACTCTGGCCAATGCTCTGTGCCCCTAAAGAAGG 196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TCAGGAAGCTGAGGCTGGGACAGGGCTGGAACCTGGGAGCAACTCTGGCCAATGCTCTGTGCCCCTAAAGAAGG 666
Query 197 GAAAAGATGCACCTATCAAAAAGGAATCCCTGGGCCACTGGAGTCAAGGCTTGAAGATTTCTATGCAGGACCCC 270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GAAAAGATGCACCTATCAAAAAGGAATCCCTGGGCCACTGGAGTCAAGGCTTGAAGATTTCTATGCAGGACCCC 740
Query 271 AAAATGCAGGTTTACAAAGATGAGCAGGTGGTGGTGATAAAGGATAAATACCCAAAGGCCCGTTACCATTGGCT 344
|||||||
Sbjct 741 AAAATGC------------------------------------------------------------------- 747
Query 345 GGTCTTACCGTGGACCTCCATTTCCAGTCTGAAGGCTGTGGCCAGGGAACACCTTGAACTCCTTAAGCATATGC 418
Sbjct 748 -------------------------------------------------------------------------- 747
Query 419 ACACTGTGGGGGAAAAGGTGATTGTAGATTTTGCTGGGTCCAGCAAACTCCGCTTCCGATTGGGCTACCACGCC 492
Sbjct 748 -------------------------------------------------------------------------- 747
Query 493 ATTCCGAGTATGAGCCATGTACATCTTCATGTGATCAGCCAGGATTTTGATTCTCCTTGCCTTAAAAACAAAAA 566
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 748 ------------AGCCATGTACATCTTCATGTGATCAGCCAGGATTTTGATTCTCCTTGCCTTAAAAACAAAAA 809
Query 567 ACATTGGAATTCTTTCAATACAGAATACTTCCTAGAATCACA-------------------------------- 608
||||||||||||||||||||||||||||||||||||||||||
Sbjct 810 ACATTGGAATTCTTTCAATACAGAATACTTCCTAGAATCACAAGAGTAGCTGGGATTTGACTTTTCTTCCTTGC 883
Query 609 ----AGCTGTGATCGAGATGGTACAAGAGGCTGGTAGAGTAACTGTCCGAGATGGGATGCCTGAGCTCTTGAAG 678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 884 CTGCAGCTGTGATCGAGATGGTACAAGAGGCTGGTAGAGTAACTGTCCGAGATGGGATGCCTGAGCTCTTGAAG 957
Query 679 CTGCCCCTTCGTTGTCATGAGTGCCAGCAGCTGCTGCCTTCCATTCCTCAGCTGAAAGAACATCTCAGGAAGCA 752
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 958 CTGCCCCTTCGTTGTCATGAGTGCCAGCAGCTGCTGCCTTCCATTCCTCAGCTGAAAGAACATCTCAGGAAGCA 1031
Query 753 CTGGACACAG---------------------------------------------------------------- 762
||||||||||
Sbjct 1032 CTGGACACAGTGATTCTGCAGAGCCTGAGCTGCTGCTGTGGTGTGGCCCACTGGAGCAAACTGCTGGCACCTAT 1105
Query 763 -------------------------------------------------------------------------- 762
Sbjct 1106 TCTGGGTTGCTTGTGAACTTCTACTCATTTCCTAAATTAAAACATGCAGCTTTTTCACAAATTTATTCTATTAT 1179
Query 763 -------------------------------------------------------------------------- 762
Sbjct 1180 TGAGTGGCCACAATGTAGAGTGGCTCAAAGTACTTCAGGATTAGGAATTTGGGTTTGTCATAGATGTATTCTCT 1253
Query 763 -------------------------------------------------------------------------- 762
Sbjct 1254 GGTGAGGGTGGCTGGGATATACCTGACCCACCATCTTCAGAAGGACCCATGTCAGGTCTGACCATTGGGAGCAA 1327
Query 763 -------------------------------------------------------------------------- 762
Sbjct 1328 AGCCATGTTCACACTGACCTAATGCAGAGTATGGAAGCATTGGGCTGGTTATACATTTCTGTTTCTTAGATTTA 1401
Query 763 -------------------------------------------------------------------------- 762
Sbjct 1402 TCCTCCGCCTCTGTAGGCATGGACAACCTTTAATCAGAGCATCTAGAGTGGCCTCTTGTTTATCCTGAAGATAC 1475
Query 763 -------------------------------------------------------------------------- 762
Sbjct 1476 TGATGGGTCTTGTTTTCTGTTAGTCTGTTTTGTAATATTCTTTTCCCTTCCTTCATGGGGAGGCTTAGTTTGTC 1549
Query 763 -------------------------------------------------------------------------- 762
Sbjct 1550 CAGTCCTTCCATGCCCTTCTATCCCAGATTACCTAAATGTTCCCTTCTCAGGAATTCTGTCTCATCAGTTCTTC 1623
Query 763 -------------------------------------------------------------------------- 762
Sbjct 1624 ACAGTGAGAAAAGAGGCTAGATGATGGTGTGGGGGGTTGGAGTTTTCTTCTAATACCGAGGGTTCCTGGCTGTG 1697
Query 763 -------------------------------------------------------------------------- 762
Sbjct 1698 AGGAAACAGCCACATGTTCGTCATGATTGAGCTGTGAAGTCTTCTTGGACCTGTTGTCTGAAAATAAAGTTAAT 1771
Query 763 -------------------------------------------------------------------------- 762
Sbjct 1772 TTGTTTGAGGCATCTCTCTTAAGTAGGTGGAAACTATTGAAGTTCAGCTAACAATCACAGCATAGGTTCTGATG 1845
Query 763 -------------------------------------------------------------------------- 762
Sbjct 1846 CATGGAAAGGTGGTTGGTGAATGAAAAAGTTGCGTAGAGCCACTACTTTCTTTTTCCCTGAGAATAAATTTGGA 1919
Query 763 ------- 762
Sbjct 1920 TAAAACA 1926
