Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_14174
- Subject:
- XR_001743500.1
- Aligned Length:
- 3108
- Identities:
- 284
- Gaps:
- 2824
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AAATAAACGTGGCGGGACGTATGTGTCATGGCGCTCTCCATCTAAAGTCTGTGCAGCTTCCGGAGAGTGGCGGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTGATTTTCTCACTTTGGACTGGTTTTTACTTCCCGACTTCTGGACTCATCTTTCAAGAGGACTTTAGACTAAT 148
Query 1 -------------------ATGCCTTCTGCAT----TGATACACTACTGGATGACATCGAAGATATCGTGTCTC 51
||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 149 TGCAGATAATTAAGAGAATATGCCTTCTGCATCCTGTGATACACTACTGGATGACATCGAAGATATCGTGTCTC 222
Query 52 AGGAAGATTCAAAACCACAAGATAGGCATTTTGTAAGAAAGGATGTTGTCCCGAAGGTACGAAGGCGAAATACC 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 AGGAAGATTCAAAACCACAAGATAGGCATTTTGTAAGAAAGGATGTTGTCCCGAAGGTACGAAGGCGAAATACC 296
Query 126 CAAAAATATTTGCAAGAGGAAGAAAACAGTCCACCAAGTGACAGCACTATTCCAGGCATACAGAAAATTTGGAT 199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CAAAAATATTTGCAAGAGGAAGAAAACAGTCCACCAAGTGACAGCACTATTCCAGGCATACAGAAAATTTGGAT 370
Query 200 ACGAACATGGGGTTGTTCTCATAATAATTCAGATGGAGAATATATGGCTGGACAGCTAGCTGCTTATGGCTATA 273
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 ACGAACATGGGGTTGTTCTCATAATAATTCAGATGGAGAATATATGGCTGGACAGCTAGCTGCTTATGGCTATA 444
Query 274 AAATTACAGGTGAA------------------------------------------------------------ 287
|||||||| |||
Sbjct 445 AAATTACA---GAAAATGCATCCGATGCAGATTTATGGCTCCTGAACAGTTGCACTGTAAAAAACCCAGCTGAA 515
Query 288 -------------------------------------------------------------------------- 287
Sbjct 516 GACCACTTTAGAAACTCAATTAAAAAAGCTCAAGAGGAGAACAAGAAAATCGTACTGGCTGGATGCGTTCCTCA 589
Query 288 -------------------------------------------------------------------------- 287
Sbjct 590 AGCCCAGCCTCGCCAGGACTACCTTAAGGGACTGAGTATCATTGGGGTTCAGCAGATAGATCGTGTGGTAGAAG 663
Query 288 -------------------------------------------------------------------------- 287
Sbjct 664 TTGTGGAGGAGACAATTAAAGGTCACTCTGTGAGACTGCTGGGTCAGAAAAAGGATAATGGAAGGCGGCTTGGG 737
Query 288 -------------------------------------------------------------------------- 287
Sbjct 738 GGAGCACGATTGGATTTGCCGAAGATTAGGAAGAATCCACTGATAGAAATCATTTCCATCAATACCGGGTGTCT 811
Query 288 -------------------------------------------------------------------------- 287
Sbjct 812 CAATGCTTGTACCTACTGCAAAACTAAACACGCCAGAGGAAATTTGGCCAGTTATCCAATTGATGAACTAGTAG 885
Query 288 -------------------------------------------------------------------------- 287
Sbjct 886 ATAGAGCCAAACAATCTTTTCAAGGAAATGGCAAAAATCCTTAATCACCCCAGAGTCTACGCTTTTCTGCACAT 959
Query 288 -------------------------------------------------------------------------- 287
Sbjct 960 ACCAGTCCAGTCTGCCTCCGACAGCGTACTCATGGAAATGAAAAGAGAATACTGTGTGGCTGACTTCAAAAGAG 1033
Query 288 -------------------------------------------------------------------------- 287
Sbjct 1034 TAGTGGATTTTCTGAAAGAGAAAGTTCCTGGAATAACTATTGCTACAGATATTATCTGTGGTTTTCCTGGAGAA 1107
Query 288 -------------------------------------------------------------------------- 287
Sbjct 1108 ACAGATCAGGATTTTCAAGAAACAGTGAAACTTGTTGAAGAGTACAAATTCCCAAGCCTGTTTATTAACCAATT 1181
Query 288 -------------------------------------------------------------------------- 287
Sbjct 1182 TTACCCAAGACCAGGAACTCCTGCTGCAAAAATGGAACAAGTTCCAGCACAAGTGAAAAAGCAAAGGACAAAAG 1255
Query 288 -------------------------------------------------------------------------- 287
Sbjct 1256 ATCTTTCTCGGGTGTTTCATTCTTACAGTCCATATGATCACAAGATTGGTGAAAGACAACAAGTGTTAGTAACA 1329
Query 288 -------------------------------------------------------------------------- 287
Sbjct 1330 GAAGAATCTTTTGATTCCAAGTTTTATGTTGCACACAATCAATTCTATGAGCAGGTTTTAGTGCCAAAGAACCC 1403
Query 288 -------------------------------------------------------------------------- 287
Sbjct 1404 TGCGTTCATGGGGAAGATGGTTGAAGTGGACATCTATGAATCAGGCAAACATTTTATGAAAGGGCAGCCAGTAT 1477
Query 288 -------------------------------------------------------------------------- 287
Sbjct 1478 CTGATGCCAAAGTGTACACGCCCTCCATCAGCAAACCGCTAGCAAAGGGAGAAGTCTCGGGTTTGACAAAGGAC 1551
Query 288 -------------------------------------------------------------------------- 287
Sbjct 1552 TTCAGAAATGGGCTTGGGAACCAGCTGAGTTCAGGATCCCACACCTCTGCTGCATCTCAGTGTGACTCAGCGAG 1625
Query 288 -------------------------------------------------------------------------- 287
Sbjct 1626 TTCCAGAATGGTGCTGCCCATGCCAAGGCTACATCAAGACTGTGCGCTGAGGATGTCCGTGGGCTTGGCTCTGC 1699
Query 288 -------------------------------------------------------------------------- 287
Sbjct 1700 TGGGTCTTCTTTTTGCTTTTTTTGTCAAGGTCTATAATTAGAATACAACTAATGGAAACATCTATAAAGAAGAA 1773
Query 288 -------------------------------------------------------------------------- 287
Sbjct 1774 TACATTTCTAATTAAAATCTTCAATGAACAGGAAAGCGACATCTCCATTCTCCAAGGGCAATAATTTGTACTGG 1847
Query 288 -------------------------------------------------------------------------- 287
Sbjct 1848 TCATGCTGCCTCCTTCTCAGCCACTCTTCTTAATGAGGCTCCCCCTGTCTCACATTGAGTTGGGCCCATTGGTT 1921
Query 288 -------------------------------------------------------------------------- 287
Sbjct 1922 ATTTGACCTAAAACCTAATCACCGCTACCATAGCACATCCTTCAAATTAAACTGCTTTTGGTTTACTTTTAGCA 1995
Query 288 -------------------------------------------------------------------------- 287
Sbjct 1996 AGAAATGCAAGCGGTTGCATTTTTTTCTGTTTGTTTCAATCTCTAATCTTTAAGTCAGAACCTAATTGTACAGT 2069
Query 288 -------------------------------------------------------------------------- 287
Sbjct 2070 GGCTCTGGCCATCTTTTCCTCATGTGGAAGAATTTTCTATCTTTAATAAACTTTTTCTTTGTTTTTTTTTTCCA 2143
Query 288 -------------------------------------------------------------------------- 287
Sbjct 2144 GATGGAGTTTCGCTCTTGTCCCCCAGGCTGGAGTGGTGCAGTGGCACGATCTCAGGTCACTGCAACCTCTGCCT 2217
Query 288 -------------------------------------------------------------------------- 287
Sbjct 2218 CCTGGGTTCAAACGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCATGCGCCACCAAGCCCAGA 2291
Query 288 -------------------------------------------------------------------------- 287
Sbjct 2292 CAATTTTTTTGTGTTTTCAGTAGAGACGGAGTTTCACCATGTTGGCCAGGCTAGTCTCGAACTCCTGACCTCAA 2365
Query 288 -------------------------------------------------------------------------- 287
Sbjct 2366 GTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTAGGATTACAGGCGTGAGCCACTGCGCCCGGCCTCTTTAATAA 2439
Query 288 -------------------------------------------------------------------------- 287
Sbjct 2440 ATATTTTTAAGTGCATCTTCCCCTTCAGGCTTTGTTTGGAGTCCCAGTGCTACAAACATTGTATTTTTCACAGC 2513
Query 288 -------------------------------------------------------------------------- 287
Sbjct 2514 AGATGTGTTCCTGAAAAGTGTATAGAAACCTGTTCTGGGAACCTGAATGCTTTTGGAATGCACGGGGAGAGTCT 2587
Query 288 -------------------------------------------------------------------------- 287
Sbjct 2588 GCCAGCTAAAGGACTCCTGGCAACATTCTGTGAAATATGAAACTGGAAAACTGGATTTGTCGAAAACTAATTGT 2661
Query 288 -------------------------------------------------------------------------- 287
Sbjct 2662 GCCCATTTTCTCACATTTTTGATCCATTGGGGTTTTTTTTTTGTTTTTGTTTTTTTTTTTTTTTGAGTCAAGGT 2735
Query 288 -------------------------------------------------------------------------- 287
Sbjct 2736 CTCACTCTGTCACCCTGGCTGGAGTGCAATGGCACTATCTTGGCTCACTGCAGCCTTGACCTCCTGGACTCAAG 2809
Query 288 -------------------------------------------------------------------------- 287
Sbjct 2810 CAGTCCTCCTACCTCAGCCTCCCTAATAGCCAGGGGCTACAGGCATATACCACCATGCCCAACTAATTTTTTAA 2883
Query 288 -------------------------------------------------------------------------- 287
Sbjct 2884 TTTTTTGTAGAGATGAGTGTCACTATGTTGCCCAGGCTTGCCTGGAACTCCTAGCCTCAAGCAGTCTTCTTGCC 2957
Query 288 -------------------------------------------------------------------------- 287
Sbjct 2958 TCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTCCACCCAGCCCAGATTAAATGTTTTTATTTCTAC 3031
Query 288 -------------------------------------------------------------------------- 287
Sbjct 3032 CTGCCATCATTGGTCTTTACTAAGTGAAGTGACTTCTTTCTTTAACAATAAATAGAATTGGTATACTAAGCAAA 3105
