Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_14225
• Subject: XM_011509800.2
• Aligned Length: 1319
• Identities: 764
• Gaps: 523

Alignment

Query    1  ATGGTCTTCGTGGGCTTTGGCTTCCTCATGGTCTTCCTGCAGCGTTACGGCTTCAGCAGCGTGGGCTTCACCTT  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  CCTCCTGGCCGCCTTTGCCCTGCAGTGGTCCACACTGGTCCAGGGCTTTCTCCACTCCTTCCACGGTGGCCACA  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  TCCATGTTGGCGTGGAGAGCATGATCAATGCTGACTTTTGTGCGGGGGCCGTGCTCATCTCCTTTGGTGCCGAC  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  CTGGGCAAGACCGGGCCTACCCAGCTGCTGCTCATGGCCCTGCTGGAGGTGGTGCTGTTTGGCATCAATGAGTT  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  TGTGCTCCTTCATCTCCTGGGGGTGAGAGTCTGGGGAGGGATGGAGTCGGGGGTGGGGGGTGGTCAAGGTC--A  368
                                                    |||  |.||            ||||    ||  |
Sbjct    1  ----------------------------------------ATG--GCCG------------GGTC----TCCTA  16

Query  369  GCCTCTGAGCCAGGAGCGTGGGGGTGGGGGCGGGGTGCTGCCTCTCACCCCACCTCCCCAGGTGAGAGATGCCG  442
            |||   |.|||              |.||||.||...||||..||         |||||.|.||     |||| 
Sbjct   17  GCC---GCGCC--------------GCGGGCCGGCGACTGCAGCT---------TCCCCTGCTG-----TGCC-  58

Query  443  GAGGC-TCCATGACTATCCACACCTTTGGTGCCTACTTCGGGCTCGTCCT-TTCGCGG-----GTTCTGTACA-  508
               .| |||       ||||      .||.||| |||.|     |||||| ||.||.|     ||.|..|||| 
Sbjct   59  ---TCTTCC-------TCCA------GGGCGCC-ACTGC-----CGTCCTCTTTGCTGTCTTTGTCCGCTACAA  110

Query  509  ---------------GGCCCCAGCTGG-AGAAGAGCAAGCAC-----CGCCAGGGCTCCGTCTACCATTCAGA-  560
                           .||||  .|||| |...||||||.|||     |||  ||         ||.||   || 
Sbjct  111  CCACAAAACCGACGCTGCCC--TCTGGCACCGGAGCAACCACAGTAACGC--GG---------ACAAT---GAA  168

Query  561  ----CCTCTTCG----CCATGATTGGGACCATCTTCCTGTGGATCTTCTGGCCTAGCTTCAATGCTGCACTCAC  626
                .|| ||||    |||     .|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  169  TTTTACT-TTCGCTACCCA-----AGGACCATCTTCCTGTGGATCTTCTGGCCTAGCTTCAATGCTGCACTCAC  236

Query  627  ATCGCTGGGGGCTGGGCAGCATCGGACGGCCCTCAACACATACTACTCCCTGGCTGCCAGCACCCTTGGCACCT  700
            |.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  237  AGCGCTGGGGGCTGGGCAGCATCGGACGGCCCTCAACACATACTACTCCCTGGCTGCCAGCACCCTTGGCACCT  310

Query  701  TTGCCTTGTCAGCCCTTGTAGGGGAAGATGGGAGGCTTGACATGGTCCACATCCAAAATGCAGCGCTGGCTGGA  774
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  311  TTGCCTTGTCAGCCCTTGTAGGGGAAGATGGGAGGCTTGACATGGTCCACATCCAAAATGCAGCGCTGGCTGGA  384

Query  775  GGGGTTGTGGTGGGGACCTCAAGTGAAATGATGCTGACACCCTTTGGGGCTCTGGCAGCTGGCTTCTTGGCTAG  848
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|
Sbjct  385  GGGGTTGTGGTGGGGACCTCAAGTGAAATGATGCTGACACCCTTTGGGGCTCTGGCAGCTGGCTTCTTGGCTGG  458

Query  849  GACTGTCTCCACGCTGGGGTACAAGTTCTTCACGCCCATCCTTGAATCAAAATTCAAAGTCCAAGACACATGTG  922
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  459  GACTGTCTCCACGCTGGGGTACAAGTTCTTCACGCCCATCCTTGAATCAAAATTCAAAGTCCAAGACACATGTG  532

Query  923  GAGTCCACAACCTCCATGGGATGCCGGGGGTCCTGGGGGCCCTCCTGGGGGTCCTTGTGGCTGGACTTGCCACC  996
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  533  GAGTCCACAACCTCCATGGGATGCCGGGGGTCCTGGGGGCCCTCCTGGGGGTCCTTGTGGCTGGACTTGCCACC  606

Query  997  CATGAAGCTTACGGAGATGGCCTGGAGAGTGTGTTTCCACTCATAGCCGAGGGCCAGCGCAGTGCCACGTCACA  1070
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  607  CATGAAGCTTACGGAGATGGCCTGGAGAGTGTGTTTCCACTCATAGCCGAGGGCCAGCGCAGTGCCACGTCACA  680

Query 1071  GGCCATGCACCAGCTCTTCGGGCTGTTTGTCACACTGATGTTTGCCTCTGTGGGCGGGGGCCTTGGAGGGCTCC  1144
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  681  GGCCATGCACCAGCTCTTCGGGCTGTTTGTCACACTGATGTTTGCCTCTGTGGGCGGGGGCCTTGGAGGGCTCC  754

Query 1145  TGCTGAAGCTACCCTTTCTGGACTCCCCCCCCAGACTCCCAGCGCTACGAGGACCAAGTTCACTGGCAGGTGCC  1218
            |||||||||||||||||||||||| ||||||||||||||||||.||||||||||||||||||||||||||||||
Sbjct  755  TGCTGAAGCTACCCTTTCTGGACT-CCCCCCCAGACTCCCAGCACTACGAGGACCAAGTTCACTGGCAGGTGCC  827

Query 1219  TGGCGAGCA----------------------------------------------------  1227
            |||||||||                                                    
Sbjct  828  TGGCGAGCATGAGGATAAAGCCCAGAGACCTCTGAGGGTGGAGGAGGCAGACACTCAGGCC  888