Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_14225
- Subject:
- XR_001737324.1
- Aligned Length:
- 1996
- Identities:
- 1111
- Gaps:
- 881
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TTGTCTGCCAAAGCCTGCGAGCGCCAGCCGAGATCGCAGCCCAACCCATGGCCGGGTCTCCTAGCCGCGCCGCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGCCGGCGACTGCAGCTTCCCCTGCTGTGCCTCTTCCTCCAGGGCGCCACTGCCGTCCTCTTTGCTGTCTTTGT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCGCTACAACCACAAAACCGACGCTGCCCTCTGGCACCGGAGCAACCACAGTAACGCGGACAATGAATTTTACT 222
Query 1 --------------------------------ATGGTCTTCGTGGGCTTTGGCTTCCTCATGGTCTTCCTGCAG 42
||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TTCGCTACCCAAGCTTCCAGGACGTGCATGCCATGGTCTTCGTGGGCTTTGGCTTCCTCATGGTCTTCCTGCAG 296
Query 43 CGTTACGGCTTCAGCAGCGTGGGCTTCACCTTCCTCCTGGCCGCCTTTGCCCTGCAGTGGTCCACACTGGTCCA 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CGTTACGGCTTCAGCAGCGTGGGCTTCACCTTCCTCCTGGCCGCCTTTGCCCTGCAGTGGTCCACACTGGTCCA 370
Query 117 GGGCTTTCTCCACTCCTTCCACGGTGGCCACATCCATGTTGGCGTGGAGAGCATGATCAATGCTGACTTTTGTG 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GGGCTTTCTCCACTCCTTCCACGGTGGCCACATCCATGTTGGCGTGGAGAGCATGATCAATGCTGACTTTTGTG 444
Query 191 CGGGGGCCGTGCTCATCTCCTTTGGTGCCGACCTGGGCAAGACCGGGCCTACCCAGCTGCTGCTCATGGCCCTG 264
||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CGGGGGCCGTGCTCATCTCCTTTGGTGCCGTCCTGGGCAAGACCGGGCCTACCCAGCTGCTGCTCATGGCCCTG 518
Query 265 CTGGAGGTGGTGCTGTTTGGCATCAATGAGTTTGTGCTCCTTCATCTCCTGGGGGTGAGAGTCTGGGGAGGGAT 338
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CTGGAGGTGGTGCTGTTTGGCATCAATGAGTTTGTGCTCCTTCATCTCCTGGG--------------------- 571
Query 339 GGAGTCGGGGGTGGGGGGTGGTCAAGGTCAGCCTCTGAGCCAGGAGCGTGGGGGTGGGGGCGGGGTGCTGCCTC 412
Sbjct 572 -------------------------------------------------------------------------- 571
Query 413 TCACCCCACCTCCCCAGGTGAGAGATGCCGGAGGCTCCATGACTATCCACACCTTTGGTGCCTACTTCGGGCTC 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 572 ----------------GGTGAGAGATGCCGGAGGCTCCATGACTATCCACACCTTTGGTGCCTACTTCGGGCTC 629
Query 487 GTCCTTTCGCGGGTTCTGTACAGGCCCCAGCTGGAGAAGAGCAAGCACCGCCAGGGCTCCGTCTACCATTCAGA 560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 630 GTCCTTTCGCGGGTTCTGTACAGGCCCCAGCTGGAGAAGAGCAAGCACCGCCAGGGCTCCGTCTACCATTCAGA 703
Query 561 CCTCTTCGCCATGATTGGGACCATCTTCCTGTGGATCTTCTGGCCTAGCTTCAATGCTGCACTCACATCGCTGG 634
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||
Sbjct 704 CCTCTTCGCCATGATTGGGACCATCTTCCTGTGGATCTTCTGGCCTAGCTTCAATGCTGCACTCACAGCGCTGG 777
Query 635 GGGCTGGGCAGCATCGGACGGCCCTCAACACATACTACTCCCTGGCTGCCAGCACCCTTGGCACCTTTGCCTTG 708
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 778 GGGCTGGGCAGCATCGGACGGCCCTCAACACATACTACTCCCTGGCTGCCAGCACCCTTGGCACCTTTGCCTTG 851
Query 709 TCAGCCCTTGTAGGGGAAGATGGGAGGCTTGACATGGTCCACATCCAAAATGCAGCGCTGGCTGGAGGGGTTGT 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 852 TCAGCCCTTGTAGGGGAAGATGGGAGGCTTGACATGGTCCACATCCAAAATGCAGCGCTGGCTGGAGGGGTTGT 925
Query 783 GGTGGGGACCTCAAGTGAAATGATGCTGACACCCTTTGGGGCTCTGGCAGCTGGCTTCTTGGCTAGGACTGTCT 856
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||
Sbjct 926 GGTGGGGACCTCAAGTGAAATGATGCTGACACCCTTTGGGGCTCTGGCAGCTGGCTTCTTGGCTGGGACTGTCT 999
Query 857 CCACGCTGGGGTACAAGTTCTTCACGCCCATCCTTGAATCAAAATTCAAAGTCCAAGACACATGTGGAGTCCAC 930
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1000 CCACGCTGGGGTACAAGTTCTTCACGCCCATCCTTGAATCAAAATTCAAAGTCCAAGACACATGTGGAGTCCAC 1073
Query 931 AACCTCCATGGGATGCCGGGGGTCCTGGGGGCCCTCCTGGGGGTCCTTGTGGCTGGACTTGCCACCCATGAAGC 1004
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1074 AACCTCCATGGGATGCCGGGGGTCCTGGGGGCCCTCCTGGGGGTCCTTGTGGCTGGACTTGCCACCCATGAAGC 1147
Query 1005 TTACGGAGATGGCCTGGAGAGTGTGTTTCCACTCATAGCCGAGGGCCAGCGCAGTGCCACGTCACAGGCCATGC 1078
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1148 TTACGGAGATGGCCTGGAGAGTGTGTTTCCACTCATAGCCGAGGGCCAGCGCAGTGCCACGTCACAGGCCATGC 1221
Query 1079 ACCAGCTCTTCGGGCTGTTTGTCACACTGATGTTTGCCTCTGTGGGCGGGGGCCTTGG---------------- 1136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1222 ACCAGCTCTTCGGGCTGTTTGTCACACTGATGTTTGCCTCTGTGGGCGGGGGCCTTGGAGACCCCTGTGCCCTG 1295
Query 1137 ----------------------------------------------------------------------AGGG 1140
||||
Sbjct 1296 TGGCACTGGGTGGCACCCTCCTCCATGGTGGGGGGCAGAGAAGCCTCACAGATCCTCCCCTACCACCACCAGGG 1369
Query 1141 CTCCTGCTGAAGCTACCCTTTCTGGACTCCCCCCCCAGACTCCCAGCGCTACGAGGACCAAGTTCACTGGCAGG 1214
|||||||||||||||||||||||||||| ||||||||||||||||||.||||||||||||||||||||||||||
Sbjct 1370 CTCCTGCTGAAGCTACCCTTTCTGGACT-CCCCCCCAGACTCCCAGCACTACGAGGACCAAGTTCACTGGCAGG 1442
Query 1215 TGCCTGGCGAGCA------------------------------------------------------------- 1227
|||||||||||||
Sbjct 1443 TGCCTGGCGAGCATGAGGATAAAGCCCAGAGACCTCTGAGGGTGGAGGAGGCAGACACTCAGGCCTAACCCACT 1516
Query 1228 -------------------------------------------------------------------------- 1227
Sbjct 1517 GCCAGCCCCTGAGAGGACACGCTCCTTTTCGAAGATGCTGACTGGCTGCTACTAGGAAGTTCTTTTTGAGCTCC 1590
Query 1228 -------------------------------------------------------------------------- 1227
Sbjct 1591 CATTCCTCCAGCTGCAAGAAGGGAGCCATGAGCCAGAAGGAGGCCCCTTTCCACAGGCAGCGTCTCCACAGGGA 1664
Query 1228 -------------------------------------------------------------------------- 1227
Sbjct 1665 GAGGGGCAACAGGAGGCTGGGAAATGGTGGGGAGTGGGGCCGTAACTGGGTACAATAGGGGGAACCTCACCAGA 1738
Query 1228 -------------------------------------------------------------------------- 1227
Sbjct 1739 TGCCCAACCCGACTGCCCTACCAGCCTGCACATGGGTAGAAGAGGCCAAATTGAGGCACCCAAGTGATCCACTG 1812
Query 1228 ------------------------------------------------------------------------ 1227
Sbjct 1813 GCCCCACGTCACACAGTTACAGTGAAGCCCAAGCCAGGCCTGGTTGAGGGTGATAAACGCCACTGTCTCTAA 1884
