Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_14276
• Subject: XR_945816.3
• Aligned Length: 1972
• Identities: 1529
• Gaps: 439

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GTTTGCCGGCTGCGGCAGTAGCTCTCGCCTGCGGGTGGTTTGACAAGGCTGGCGGCGCCACACCAGCGACCAGG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CCTGGAGCTCACACTTCTGAGAGGCATCGCAAGCGAGGGCCTTCACGTTACTGAGACCCCAGCCCCGCACAGAG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GCTCATGGAGCTCGAAGCACGCAGGGCTGGCCTCTCCAGAGCTAGCAGATTCCTTCTGGACCTGTAGGGTGCCG  222

Query    1  ----------------ATGGCGCAGGGTTTCGCAGTGGGCTTCGACCCACTGGGCCTAGGAGACCTGAGCTCCG  58
                            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CCCTAGCCCAGCCGCCATGGCGCAGGGTTTCGCAGTGGGCTTCGACCCACTGGGCCTAGGAGACCTGAGCTCCG  296

Query   59  GCTCTCTGAGCTCCCTCTCCTCCCGAGGCCACCTAGGCAGCGACTCAGGCTCCACCGCAACGCGATACCTGCTA  132
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GCTCTCTGAGCTCCCTCTCCTCCCGAGGCCACCTAGGCAGCGACTCAGGCTCCACCGCAACGCGATACCTGCTA  370

Query  133  AGGAAGCAACAACGGCTGCTGAACGGGCCCCCCCGCGGAATCCGAGCCTCATCGCCCATGGGACGCGTCATCCT  206
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  AGGAAGCAACAACGGCTGCTGAACGGGCCCCCCCGCGGAATCCGAGCCTCATCGCCCATGGGACGCGTCATCCT  444

Query  207  CATCAACTCCCCCATCGAAGCCAACAGTGATGAAAGTGACATCATCCATTCAGTCCGGGTGGAGAAGAGTCCAG  280
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CATCAACTCCCCCATCGAAGCCAACAGTGATGAAAGTGACATCATCCATTCAGTCCGGGTGGAGAAGAGTCCAG  518

Query  281  CAGGGAGGCTGGGCTTCAGCGTGCGCGGGGGCTCAGAGCATGGCCTGGGCATCTTCGTCAGCAAAGTGGAGGAA  354
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CAGGGAGGCTGGGCTTCAGCGTGCGCGGGGGCTCAGAGCATGGCCTGGGCATCTTCGTCAGCAAAGTGGAGGAA  592

Query  355  GGCAGCAGTGCAGAGCGGGCTGGCCTGTGCGTGGGGGACAAGATCACGGAGGTGAATGGGCTGAGCCTGGAGAG  428
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  GGCAGCAGTGCAGAGCGGGCTGGCCTGTGCGTGGGGGACAAGATCACGGAGGTGAATGGGCTGAGCCTGGAGAG  666

Query  429  CACCACCATGGGTAGCGCCGTAAAGGTGCTGACCAGCAGCAGCCGCCTGCACATGATGGTTCGGCGCATGGGCC  502
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  CACCACCATGGGTAGCGCCGTAAAGGTGCTGACCAGCAGCAGCCGCCTGCACATGATGGTTCGGCGCATGGGCC  740

Query  503  GTGTGCCGGGCATCAAGTTCTCCAAGGAGAAGACCACGTGGGTGGATGTGGTGAATCGGCGCCTGGTAGTGGAG  576
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  GTGTGCCGGGCATCAAGTTCTCCAAGGAGAAGACCACGTGGGTGGATGTGGTGAATCGGCGCCTGGTAGTGGAG  814

Query  577  AAGTGCGGTTCAACACCCTCCGACACCAGCTCAGAAGATGGTGTCCGGCGCATCGTCCACCTATACACAACCTC  650
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  AAGTGCGGTTCAACACCCTCCGACACCAGCTCAGAAGATGGTGTCCGGCGCATCGTCCACCTATACACAACCTC  888

Query  651  CGACGACTTCTGCCTGGGCTTCAACATCCGTGGGGGCAAGGAGTTTGGCCTGGGCATCTATGTGTCCAAAGTGG  724
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  CGACGACTTCTGCCTGGGCTTCAACATCCGTGGGGGCAAGGAGTTTGGCCTGGGCATCTATGTGTCCAAAGTGG  962

Query  725  ACCATGGTGGGCTGGCCGAGGAGAATGGCATCAAGGTGGGGGACCAGGTCCTGGCAGCCAACGGTGTCAGGTTT  798
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  ACCATGGTGGGCTGGCCGAGGAGAATGGCATCAAGGTGGGGGACCAGGTCCTGGCAGCCAACGGTGTCAGGTTT  1036

Query  799  GACGACATCAGCCACAGCCAGGCCGTGGAGGTGCTGAAGGGCCAAACGCACATCATGCTGACCATCAAGGAGAC  872
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  GACGACATCAGCCACAGCCAGGCCGTGGAGGTGCTGAAGGGCCAAACGCACATCATGCTGACCATCAAGGAGAC  1110

Query  873  CGGCCGGTATCCTGCCTACAAGGAGATGGTTTCTGAGTACTGCTGGCTGGACCGACTGAGCAACGGGGTGCTGC  946
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  CGGCCGGTATCCTGCCTACAAGGAGATGGTTTCTGAGTACTGCTGGCTGGACCGACTGAGCAACGGGGTGCTGC  1184

Query  947  AGCAGCTGTCCCCGGCCTCTGAGAGCAGCTCCAGCGTCTCTTCGTGCGCCTCCAGCGCCCCCTACAGCTCGGGC  1020
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  AGCAGCTGTCCCCGGCCTCTGAGAGCAGCTCCAGCGTCTCTTCGTGCGCCTCCAGCGCCCCCTACAGCTCGGGC  1258

Query 1021  TCCCTGCCGTCGGACCGCATGGACATCTGCCTCGGGCAGGAGGAGCCCGGCAGCCGCGGCCCAGGCTGGGGGCG  1094
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  TCCCTGCCGTCGGACCGCATGGACATCTGCCTCGGGCAGGAGGAGCCCGGCAGCCGCGGCCCAGGCTGGGGGCG  1332

Query 1095  GGCGGACACAGCCATGCAGACGGAGCCCGATGCGGGAGGCCGGGTGGAGACCTGGTGCAGCGTGCGGCCCACAG  1168
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  GGCGGACACAGCCATGCAGACGGAGCCCGATGCGGGAGGCCGGGTGGAGACCTGGTGCAGCGTGCGGCCCACAG  1406

Query 1169  TCATCCTCAGGGACACCGCCATCCGCTCGGACGGCCCCCATCCCGGCCGCCGCCTTGACTCTGCGCTCTCTGAG  1242
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  TCATCCTCAGGGACACCGCCATCCGCTCGGACGGCCCCCATCCCGGCCGCCGCCTTGACTCTGCGCTCTCTGAG  1480

Query 1243  TCTCCCAAGACGGCTTTGCTGCTGGCCCTCAGCCGACCCCGGCCCCCCATCACGCGCTCCCAGAGCTATCTGAC  1316
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  TCTCCCAAGACGGCTTTGCTGCTGGCCCTCAGCCGACCCCGGCCCCCCATCACGCGCTCCCAGAGCTATCTGAC  1554

Query 1317  CTTGTGG----------------------------GAGGAGAAGCAGCAGCG---GAAGGAGAAGTCGGGGTCC  1359
            |||||||                            |||||||||||||||||   |||||||||||||||||||
Sbjct 1555  CTTGTGGGCTCCCCCGTTGCTCCCTCGTGTCTGCAGAGGAGAAGCAGCAGCGGAAGAAGGAGAAGTCGGGGTCC  1628

Query 1360  CCTGGGGAGAAGGGTGCCCTGCAGCGCTCCAAGACGCTGATGAACCTCTTCTTCAAGGGAGGGCGGCAGGGGAG  1433
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  CCTGGGGAGAAGGGTGCCCTGCAGCGCTCCAAGACGCTGATGAACCTCTTCTTCAAGGGAGGGCGGCAGGGGAG  1702

Query 1434  GCTAGCGCGGGACGGGCGCAGAGAGGCCTGGACACTGGACAGCGGGAGCCTGGCCAAAACTTACCCTCGCCTGG  1507
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  GCTAGCGCGGGACGGGCGCAGAGAGGCCTGGACACTGGACAGCGGGAGCCTGGCCAAAACTTACCCTCGCCTGG  1776

Query 1508  ACATAGAGAAAG--------AGATGGGGGCA-ACA---------------------------------------  1533
            ||||||||||||        .||.||.|||| |.|                                       
Sbjct 1777  ACATAGAGAAAGTATGTGCACGAGGGAGGCATAGAGGACCTGGTGAGGCCCCTGCTGGCCATCCTCGACAGGCC  1850

Query 1534  --------------------------------------------------------------------------  1533
                                                                                      
Sbjct 1851  GGAGAAGCTGCTACTGCTGCAGGACATCAGGAGTGTGGTGGCCCCCACAGACCTGGGCCGCTTCGACAGCATGG  1924

Query 1534  ------------------------------------------------  1533
                                                            
Sbjct 1925  TGATGCTTGTGGAGCTGGAGGCTTTTGAGGCCCTCAAGAGCAGGGCAG  1972