Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_14299
- Subject:
- XM_011532303.3
- Aligned Length:
- 3144
- Identities:
- 1666
- Gaps:
- 1476
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCACCCCGATGCGACCGACAGTGGCGGCGCCGGCCCCAGCCCCGCGCGGGCCGCAGGCGCCGGCGGCCGTCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGTCTCGGGCTTCAGGGGCGAGCGGCGGCCGGAGTCCCCGGGGGACGCGGAGGCAGCAGCAGCGGCGGCGCCGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGGCCCCGGGCGGCCGGAGCTGGTGGAAGCCCGTGGCGGTGGCCGCACTCGCCGCCGTGGCCCTCTCCTTCCTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGGCCCGGCAGCGGGGAGGCGGCGGGGGCCGCGGGGCTGAGCTCCGTCCTGTTCAGGCTCAGCCTGTACCTGAG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTGCGCGGCGGCCGCCTTCCTGCTGGGGATCCTGTTTGCCCTCGTCTGCCGGAGCCCGCGCGCCCAGCCGCCCG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ACTTCGCCGCCGCCTGGAGCCGGCTGGCCGCGACCTCAGCCGCCCGCCGCCCGCCGGGGAGTCCTGTGTATGGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AACTCACATGAGTCAGCTCAGTCTAGAAGGGTAGTAATTTCTCATAATATGGATAAAGCTCTGAAAGAAGTGTT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CGACTACAGTTATAGAGATTACATTCTGTCCTGGTATGGAAACCTCAGCAGAGATGAGGGACAACTTTACCATC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TGCTCTTGGAAGACTTTTGGGAAATTGCCAGACAGCTGCACCACAGACTGAGTCACGTGGATGTGGTTAAAGTT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GTCTGCAATGATGTTGTGAGGACTTTACTCACTCATTTCTGTGACCTGAAAGCTGCCAATGCCAGACATGAAGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ACAGCCAAGACCTTTTGTGTTGCACGCATGCTTGAGGAACTCAGATGATGAAGTAAGATTTCTACAAACGTGTT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CTCGGGTTCTGGTGTTTTGTCTCCTCCCCTCAAAGGATGTGCAGTCTCTCAGCTTACGTATAATGCTTGCAGAA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ATTCTCACAACAAAAGTCTTGAAGCCGGTAGTGGAGTTACTGAGTAATCCAGATTACATTAACCAAATGCTGCT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TGCCCAGCTGGCGTACAGAGAGCAAATGAATGAGCATCACAAGAGAGCCTACACCTATGCCCCCTCTTACGAGG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ACTTCATCAAGCTCATTAACAGCAACTCTGATGTGGAGTTCTTGAAGCAACTAAGGGAAAGCGTACAAACATCA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GCCCTCCTGATTCTTGAACCGAACTCAGCACTTGCAAAGTCGTATCCTCCTCTGGAGAAAGAAAACCGAGTGAG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TGCCAGGTATCAAATTGTAGTGGAAATAATCCAGGCGACTACAATTAGCAGCTTTCCCCAACTGAAGAGGCACA 1258
Query 1 --------------------ATGAAAGCTGATCTCCTGAGGGCCAGGAACATGAAGAGGTACATCAACCAACTG 54
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 AAGGTAAAGAAACTGCGGCAATGAAAGCTGATCTCCTGAGGGCCAGGAACATGAAGAGGTACATCAACCAACTG 1332
Query 55 ACTGTGGCAAAGAAGCAGTGTGAGAAGAGAATCCGAATCCTGGGAGGCCCTGCCTATGACCAGCAAGAGGATGG 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 ACTGTGGCAAAGAAGCAGTGTGAGAAGAGAATCCGAATCCTGGGAGGCCCTGCCTATGACCAGCAAGAGGATGG 1406
Query 129 GGCCCTGGATGAGGGGGAAGGGCCTCAAAGCCAGA---------------------------------AGATTC 169
||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1407 GGCCCTGGATGAGGGGGAAGGGCCTCAAAGCCAGAAGAAGCTACAGATAGAAGGTTCAATATCTCCACAGATTC 1480
Query 170 TTCAGTTTGAAGATATCTTGGCCAATACGTTCTACCGAGAGCACTTTGGAATGTACATGGAAAGGATGGACAAA 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 TTCAGTTTGAAGATATCTTGGCCAATACGTTCTACCGAGAGCACTTTGGAATGTACATGGAAAGGATGGACAAA 1554
Query 244 AGAGCTCTGATTAGTTTTTGGGAATCTGTGGAACATTTAAAGAATGCTAACAAGAATGAAATTCCACAATTAGT 317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 AGAGCTCTGATTAGTTTTTGGGAATCTGTGGAACATTTAAAGAATGCTAACAAGAATGAAATTCCACAATTAGT 1628
Query 318 TGGTGAAATTTATCAGAATTTCTTTGTGGAGAGCAAAGAAATATCTGTGGAAAAATCACTTTACAAAGAAATTC 391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 TGGTGAAATTTATCAGAATTTCTTTGTGGAGAGCAAAGAAATATCTGTGGAAAAATCACTTTACAAAGAAATTC 1702
Query 392 AGCAGTGTCTTGTAGGAAATAAAGGTATTGAAGTATTCTACAAAATCCAGGAAGATGTTTATGAGACCCTAAAG 465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 AGCAGTGTCTTGTAGGAAATAAAGGTATTGAAGTATTCTACAAAATCCAGGAAGATGTTTATGAGACCCTAAAG 1776
Query 466 GACAGGTATTACCCTTCATTTATTGTCAGTGACCTGTATGAGAAATTGTTGATAAAAGAGGAAGAAAAACATGC 539
||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 GATAGGTATTACCCTTCATTTATTGTCAGTGACCTGTATGAGAAATTGTTGATAAAAGAGGAAGAAAAACATGC 1850
Query 540 CTCACAGATGATTTCCAACAAGGATGAGATGGGCCCAAGAGATGAGGCTGGTGAGGAAGCCGTGGATGATGGTA 613
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 CTCACAGATGATTTCCAACAAGGATGAGATGGGCCCAAGAGATGAGGCTGGTGAGGAAGCCGTGGATGATGGTA 1924
Query 614 CCAATCAGATCAATGAACAAGCCAGTTTTGCTGTAAACAAACTGCGAGAACTAAATGAGAAACTTGAATATAAA 687
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 CCAATCAGATCAATGAACAAGCCAGTTTTGCTGTAAACAAACTGCGAGAACTAAATGAGAAACTTGAATATAAA 1998
Query 688 AGGCAAGCTCTAAATTCTATTCAAAATGCACCAAAACCTGACAAGAAGATTGTTTCCAAGTTGAAGGATGAAAT 761
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 AGGCAAGCTCTAAATTCTATTCAAAATGCACCAAAACCTGACAAGAAGATTGTTTCCAAGTTGAAGGATGAAAT 2072
Query 762 AATCCTAATAGAGAAAGAACGCACAGACCTTCAGCTGCACATAGCAAGAACGGATTGGTGGTGTGAAAACCTTG 835
||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||
Sbjct 2073 AATCCTAATAGAGAAAGAACGCACAGACCTTCAGCTGCACATGGCAAGAACGGATTGGTGGTGTGAAAACCTTG 2146
Query 836 GCATGTGGAAAGCCTCCATCACCAGTGGAGAGGTTACAGAAGAGAATGGTGAGCAATTGCCATGTTACTTTGTC 909
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 GCATGTGGAAAGCCTCCATCACCAGTGGAGAGGTTACAGAAGAGAATGGTGAGCAATTGCCATGTTACTTTGTC 2220
Query 910 ATGGTAAGCCTACAAGAAGTTGGAGGAGTTGAAACTAAGAACTGGACGGTCCCCAGAAGGCTCAGCGAGTTTCA 983
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 ATGGTAAGCCTACAAGAAGTTGGAGGAGTTGAAACTAAGAACTGGACGGTCCCCAGAAGGCTCAGCGAGTTTCA 2294
Query 984 GAATTTACACCGGAAACTCAGTGAGTGCGTCCCTTCTTTAAAAAAAGTCCAGTTGCCTTCTCTTAGCAAGCTGC 1057
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 GAATTTACACCGGAAACTCAGTGAGTGCGTCCCTTCTTTAAAAAAAGTCCAGTTGCCTTCTCTTAGCAAGCTGC 2368
Query 1058 CTTTCAAATCTATAGATCAAAAGTTTATGGAAAAGTCGAAGAATCAATTAAATAAGTTTTTAC----------- 1120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 CTTTCAAATCTATAGATCAAAAGTTTATGGAAAAGTCGAAGAATCAATTAAATAAGTTTTTACAGAATCTGCTT 2442
Query 1121 -------------------------------------------------------------------------- 1120
Sbjct 2443 TCAGATGAAAGACTGTGTCAGAGTGAAGCACTTTATGCCTTCTTGAGCCCTTCTCCTGACTACCTCAAGGTTAT 2516
Query 1121 -------------------------------------------------------------------------- 1120
Sbjct 2517 CGACGTGCAGGGGAAAAAAAATTCTTTTTCATTATCCTCATTTTTGGAAAGACTTCCTCGCGACTTCTTCTCCC 2590
Query 1121 ------AGGAGGAGACAGAGGAGGACAGTGACCTGTCAGATTATGGTGATGATGTGGATGGGAGGAAAGACGCC 1188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591 ACCAGGAGGAGGAGACAGAGGAGGACAGTGACCTGTCAGATTATGGTGATGATGTGGATGGGAGGAAAGACGCC 2664
Query 1189 TTGGCTGAACCATGTTTCATGTTGATTGGGGAGATTTTTGAACTTCGAGGAATGTTTAAATGGGTGAGAAGAAC 1262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2665 TTGGCTGAACCATGTTTCATGTTGATTGGGGAGATTTTTGAACTTCGAGGAATGTTTAAATGGGTGAGAAGAAC 2738
Query 1263 ATTAATTGCCCTCGTTCAGGTCACTTTTGGAAGAACCATCAACAAACAAATCCGGGACACAGTCAGCTGGATTT 1336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2739 ATTAATTGCCCTCGTTCAGGTCACTTTTGGAAGAACCATCAACAAACAAATCCGGGACACAGTCAGCTGGATTT 2812
Query 1337 TCAGTGAGCAAATGTTGGTTTACTACATCAATATTTTCCGGGATGCTTTTTGGCCAAATGGGAAGTTGGCACCA 1410
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2813 TCAGTGAGCAAATGTTGGTTTACTACATCAATATTTTCCGGGATGCTTTTTGGCCAAATGGGAAGTTGGCACCA 2886
Query 1411 CCGACCACAATCAGAAGCAAAGAGCAAAGTCAGGAAACAAAACAGAGAGCACAGCAAAAGCTGCTTGAAAACAT 1484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2887 CCGACCACAATCAGAAGCAAAGAGCAAAGTCAGGAAACAAAACAGAGAGCACAGCAAAAGCTGCTTGAAAACAT 2960
Query 1485 TCCAGATATGCTTCAGAGCCTTGTTGGACAGCAAAATGCCCGCCACGGTATAATAAAAATATTCAATGCACTGC 1558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2961 TCCAGATATGCTTCAGAGCCTTGTTGGACAGCAAAATGCCCGCCACGGTATAATAAAAATATTCAATGCACTGC 3034
Query 1559 AAGAAACAAGAGCCAACAAGCATCTGTTATATGCGCTGATGGAACTGCTGCTAATTGAACTGTGTCCTGAGCTG 1632
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3035 AAGAAACAAGAGCCAACAAGCATCTGTTATATGCGCTGATGGAACTGCTGCTAATTGAACTGTGTCCTGAGCTG 3108
Query 1633 AGAGTTCATTTAGATCAACTTAAAGCTGGCCAAGTT 1668
||||||||||||||||||||||||||||||||||||
Sbjct 3109 AGAGTTCATTTAGATCAACTTAAAGCTGGCCAAGTT 3144
