Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_14485
- Subject:
- NM_001308195.2
- Aligned Length:
- 2673
- Identities:
- 982
- Gaps:
- 1674
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGAGGATTTCATCGTGATCTCGGACGACAGCGGCTCTGAGAGCTCCGGGGGCGCCCGCCCGGGCCGGTCGCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GAGGCCGCGCCGGGCCCTGTCGCGAACCTCCGGCGCGCTGCCCCGCCGGACCGTGGACTTCATTGACTTAACTA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GAGAGACCAGACCAAGGACAAAAGATCGCAGTGGACTGTATGTGATTGACCTGACAAGAGCTGAGGGAGAAAAT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGACCTATTGCCACTCTTGACTTAACTTTAGAACCTGTCACTCCTTCCCAGAAGGAGCCAACCAGTCTTCAGAC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ATGTGCCAGCCTCTCTGGCAAAGCGGTGATGGAAGGGCACGTGGACAGAAGCTCTCAGCCTACAGCACGGAGAA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCATTAACAGTGATCCTGTAGATTTGGACCTAGTGGAAGAAAACACCTTTGTAGGTCCCCCACCCGCTACATCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ATCAGTGGAGGCTCTGTTTATCCAACAGAGCCTAATTGTAGCTCAGCCACATTCACAGGTAACCTCAGCTTCTT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGCAAGTCTACAGCTGTCTTCAGATGTTAGCTCCCTCTCCCCAACAAGCAATAATAGTAGGAGCAGCAGCAGCA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GCAGCAATCAAAAAGCACCCTTGCCATGCCCACAGCAAGATGTATCTCGCCCACCACAGGCCTTGCCGTGCCCC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CTGCGACCTTTGCCATGCCCACCGAGAGCCTCACCATGTCCACCACGAGCCTCCTCATGCCCACCACGAGCCTT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GTCATGCCCATCACAAACCATGCAGTGCCAACTACCAGCTCTAACTCACCCACCTCAAGAAGTGCCATGCCCTC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GGCAGAATATCCCAGGCCCACCTCAAGACTCTCTGGGCCTACCTCAAGATGTGCCAGGGCTGCCTCAAAGCATA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TTACATCCACAAGATGTGGCATACCTGCAAGACATGCCACGGTCACCAGGAGATGTGCCACAGTCACCAAGTGA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TGTTTCACCGTCACCAGATGCACCACAGTCACCAGGGGGCATGCCACACTTACCGGGAGATGTGTTACATTCAC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CTGGAGACATGCCACACTCATCAGGGGACGTGACACACTCACCTAGAGACATCCCTCACTTACCAGGAGACAGG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CCTGACTTTACCCAGAATGATGTACAGAACCGTGACATGCCTATGGATATCTCAGCTCTGTCCTCTCCAAGCTG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CTCTCCCAGCCCACAGTCTGAAACTCCCTTAGAGAAAGTTCCTTGGCTCTCTGTCATGGAAACCCCAGCCAGAA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AAGAAATATCACTGTCAGAGCCTGCCAAACCTGGGTCTGCCCACGTACAATCACGAACACCACAAGGTGGGTTG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TACAACAGACCATGCCTGCATAGACTGAAGTACTTCTTACGTCCTCCGGTTCATCACCTCTTCTTTCAGACGCT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AATACCGGATAAAGACACAAGAGAGAACAAGGGTCAAAAATTAGAACCCATCCCTCATCGAAGACTAAGAATGG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TAACAAATACCATTGAAGAGAATTTTCCTCTGGGGACTGTGCAGTTTTTGATGGACTTTGTGTCACCCCAGCAT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TACCCACCAAGAGAAATCGTGGCTCACATCATCCAGAAAATCTTGCTCAGTGGCTCTGAGACTGTGGATGTCCT 1628
Query 1 -----ATGCCTAGATCC-----------ATTGAACAAGTA-AT------AATACTTAAAAAATGGTTT----CT 47
|.|||||.||.| |||.||||..|| || |||.|..|.|.|.|||..| ||
Sbjct 1629 AAAGGAGGCCTACATGCTTCTCATGAAAATTCAACAGCTACATCCAGCCAATGCCAAGACAGTGGAGTGGGACT 1702
Query 48 GAAACCT-------TAT------------AAGGGACAAACTCTGCCTGGGCGAGTCCTTTTCCTGCGTTATGTC 102
|.||.|| ||| .||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 GGAAACTGCTCACCTATGTCATGGAGGAAGAGGGACAAACTCTGCCTGGGCGAGTCCTTTTCCTGCGTTATGTC 1776
Query 103 GTTCAGACCCTAGAAGATGACTTTCAGCAGACCCTGAGGAGGCAACGGCAGCACCTGCAGCAATCCATTGCAAA 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 GTTCAGACCCTAGAAGATGACTTTCAGCAGACCCTGAGGAGGCAACGGCAGCACCTGCAGCAATCCATTGCAAA 1850
Query 177 CATGGTGCTTTCCTGTGACAAGCAGCCCCACAATGTCAGGGATGTTATCAAGTGGCTGGTCAAAGCAGTAACTG 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 CATGGTGCTTTCCTGTGACAAGCAGCCCCACAATGTCAGGGATGTTATCAAGTGGCTGGTCAAAGCAGTAACTG 1924
Query 251 AAGATGGATTGACTCAGCCCCCAAATGGAAATCAAACGTCTTCAGGAACAGGAATCTTGAAAGCCAGCAGTAGC 324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 AAGATGGATTGACTCAGCCCCCAAATGGAAATCAAACGTCTTCAGGAACAGGAATCTTGAAAGCCAGCAGTAGC 1998
Query 325 CACCCTTCTTCCCAGCCCAACCTGACAAAGAACACCAATCAGCTGATTGTGTGCCAGCTTCAGAGGATGCTCTC 398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 CACCCTTCTTCCCAGCCCAACCTGACAAAGAACACCAATCAGCTGATTGTGTGCCAGCTTCAGAGGATGCTCTC 2072
Query 399 CATAGCCGTAGAGGTGGACAGGACCCCCACCTGCAGCTCCAATAAAATTGCCGAGATGATGTTTGGGTTTGTGC 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 CATAGCCGTAGAGGTGGACAGGACCCCCACCTGCAGCTCCAATAAAATTGCCGAGATGATGTTTGGGTTTGTGC 2146
Query 473 TGGACATTCCTGAGAGGAGCCAGAGAGAAATGTTCTTTACTACCATGGAAAGCCACCTTCTGCGCTGCAAAGTG 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 TGGACATTCCTGAGAGGAGCCAGAGAGAAATGTTCTTTACTACCATGGAAAGCCACCTTCTGCGCTGCAAAGTG 2220
Query 547 TTAGAAATCATATTCCTCCACAGCTGTGAGACACCCACCCGCCTGCCTCTGTCTCTGGCCCAGGCCCTCTACTT 620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 TTAGAAATCATATTCCTCCACAGCTGTGAGACACCCACCCGCCTGCCTCTGTCTCTGGCCCAGGCCCTCTACTT 2294
Query 621 TCTGAATAATTCTACGTCACTGCTCAAGTGTCAGTCAGATAAAAGCCAGTGGCAGACTTGGGACGAATTGGTTG 694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 TCTGAATAATTCTACGTCACTGCTCAAGTGTCAGTCAGATAAAAGCCAGTGGCAGACTTGGGACGAATTGGTTG 2368
Query 695 AGCATCTGCAGTTTCTGCTGTCCAGTTATCAACATGTTTTAAGAGAACACTTAAGGAGTTCCGTGATCGACCGA 768
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 AGCATCTGCAGTTTCTGCTGTCCAGTTATCAACATGTTTTAAGAGAACACTTAAGGAGTTCCGTGATCGACCGA 2442
Query 769 AAGGACTTAATAATCAAAAGGATTAAGCCCAAACCCCAGCAAGGAGATGACATCACAGTGGTAGACGTAGAGAA 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443 AAGGACTTAATAATCAAAAGGATTAAGCCCAAACCCCAGCAAGGAGATGACATCACAGTGGTAGACGTAGAGAA 2516
Query 843 GCAGATTGAGGCCTTCCGCAGCCGCCTGATCCAGATGCTGGGGGAGCCTCTTGTCCCCCAACTCCAAGACAAAG 916
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517 GCAGATTGAGGCCTTCCGCAGCCGCCTGATCCAGATGCTGGGGGAGCCTCTTGTCCCCCAACTCCAAGACAAAG 2590
Query 917 TGCACTTGTTGAAGCTCCTGCTCTTCTATGCTGCGGACTTGAACCCTGATGCAGAGCCCTTTCAAAAGGGCTGG 990
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591 TGCACTTGTTGAAGCTCCTGCTCTTCTATGCTGCGGACTTGAACCCTGATGCAGAGCCCTTTCAAAAGGGCTGG 2664
Query 991 AGCGGCTCC 999
|||||||||
Sbjct 2665 AGCGGCTCC 2673
