Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_14485
- Subject:
- NR_131772.2
- Aligned Length:
- 1868
- Identities:
- 982
- Gaps:
- 869
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCCCCGCCGCCGCCACCTCAGAAGCAGGAACCGAAGTCGTCGCCGCCGCCGCCACTGCCTGGGTCTTCGGTCGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGCCCGCAGCCATGGAGGATTTCATCGTGATCTCGGACGACAGCGGCTCTGAGAGCTCCGGGGGCGCCCGCCCG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGCCGGTCGCGGAGGCCGCGCCGGGCCCTGTCGCGAACCTCCGGCGCGCTGCCCCGCCGGACCGTGAACAAGGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TCAAAAATTAGAACCCATCCCTCATCGAAGACTAAGAATGGTAACAAATACCATTGAAGAGAATTTTCCTCTGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGACTGTGCAGTTTTTGATGGACTTTGTGTCACCCCAGCATTACCCACCAAGAGAAATCGTGGCTCACATCATC 370
Query 1 ----------------------------------------------ATGCCTAGATCC-----------ATTGA 17
|.|||||.||.| |||.|
Sbjct 371 CAGAAAATCTTGCTCAGTGGCTCTGAGACTGTGGATGTCCTAAAGGAGGCCTACATGCTTCTCATGAAAATTCA 444
Query 18 ACAAGTA-AT------AATACTTAAAAAATGGTTT----CTGAAACCT-------TAT------------AAGG 61
|||..|| || |||.|..|.|.|.|||..| |||.||.|| ||| .|||
Sbjct 445 ACAGCTACATCCAGCCAATGCCAAGACAGTGGAGTGGGACTGGAAACTGCTCACCTATGTCATGGAGGAAGAGG 518
Query 62 GACAAACTCTGCCTGGGCGAGTCCTTTTCCTGCGTTATGTCGTTCAGACCCTAGAAGATGACTTTCAGCAGACC 135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GACAAACTCTGCCTGGGCGAGTCCTTTTCCTGCGTTATGTCGTTCAGACCCTAGAAGATGACTTTCAGCAGACC 592
Query 136 CTGAGGAGGCAACGGCAGCACCTGCAGCAATCCATTGCAAACATGGTGCTTTCCTGTGACAAGCAGCCCCACAA 209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CTGAGGAGGCAACGGCAGCACCTGCAGCAATCCATTGCAAACATGGTGCTTTCCTGTGACAAGCAGCCCCACAA 666
Query 210 TGTCAGGGATGTTATCAAGTGGCTGGTCAAAGCAGTAACTGAAGATGGATTGACTCAGCCCCCAAATGGAAATC 283
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TGTCAGGGATGTTATCAAGTGGCTGGTCAAAGCAGTAACTGAAGATGGATTGACTCAGCCCCCAAATGGAAATC 740
Query 284 AAACGTCTTCAGGAACAGGAATCTTGAAAGCCAGCAGTAGCCACCCTTCTTCCCAGCCCAACCTGACAAAGAAC 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 AAACGTCTTCAGGAACAGGAATCTTGAAAGCCAGCAGTAGCCACCCTTCTTCCCAGCCCAACCTGACAAAGAAC 814
Query 358 ACCAATCAGCTGATTGTGTGCCAGCTTCAGAGGATGCTCTCCATAGCCGTAGAGGTGGACAGGACCCCCACCTG 431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 ACCAATCAGCTGATTGTGTGCCAGCTTCAGAGGATGCTCTCCATAGCCGTAGAGGTGGACAGGACCCCCACCTG 888
Query 432 CAGCTCCAATAAAATTGCCGAGATGATGTTTGGGTTTGTGCTGGACATTCCTGAGAGGAGCCAGAGAGAAATGT 505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CAGCTCCAATAAAATTGCCGAGATGATGTTTGGGTTTGTGCTGGACATTCCTGAGAGGAGCCAGAGAGAAATGT 962
Query 506 TCTTTACTACCATGGAAAGCCACCTTCTGCGCTGCAAAGTGTTAGAAATCATATTCCTCCACAGCTGTGAGACA 579
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 TCTTTACTACCATGGAAAGCCACCTTCTGCGCTGCAAAGTGTTAGAAATCATATTCCTCCACAGCTGTGAGACA 1036
Query 580 CCCACCCGCCTGCCTCTGTCTCTGGCCCAGGCCCTCTACTTTCTGAATAATTCTACGTCACTGCTCAAGTGTCA 653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CCCACCCGCCTGCCTCTGTCTCTGGCCCAGGCCCTCTACTTTCTGAATAATTCTACGTCACTGCTCAAGTGTCA 1110
Query 654 GTCAGATAAAAGCCAGTGGCAGACTTGGGACGAATTGGTTGAGCATCTGCAGTTTCTGCTGTCCAGTTATCAAC 727
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GTCAGATAAAAGCCAGTGGCAGACTTGGGACGAATTGGTTGAGCATCTGCAGTTTCTGCTGTCCAGTTATCAAC 1184
Query 728 ATGTTTTAAGAGAACACTTAAGGAGTTCCGTGATCGACCGAAAGGACTTAATAATCAAAAGGATTAAGCCCAAA 801
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 ATGTTTTAAGAGAACACTTAAGGAGTTCCGTGATCGACCGAAAGGACTTAATAATCAAAAGGATTAAGCCCAAA 1258
Query 802 CCCCAGCAAGGAGATGACATCACAGTGGTAGACGTAGAGAAGCAGATTGAGGCCTTCCGCAGCCGCCTGATCCA 875
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 CCCCAGCAAGGAGATGACATCACAGTGGTAGACGTAGAGAAGCAGATTGAGGCCTTCCGCAGCCGCCTGATCCA 1332
Query 876 GATGCTGGGGGAGCCTCTTGTCCCCCAACTCCAAGACAAAGTGCACTTGTTGAAGCTCCTGCTCTTCTATGCTG 949
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 GATGCTGGGGGAGCCTCTTGTCCCCCAACTCCAAGACAAAGTGCACTTGTTGAAGCTCCTGCTCTTCTATGCTG 1406
Query 950 CGGACTTGAACCCTGATGCAGAGCCCTTTCAAAAGGGCTGGAGCGGCTCC------------------------ 999
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 CGGACTTGAACCCTGATGCAGAGCCCTTTCAAAAGGGCTGGAGCGGCTCCTGAGGGCCTGCCAAGCACTGAATG 1480
Query 1000 -------------------------------------------------------------------------- 999
Sbjct 1481 CCAAGAATACCTCCTGAACTCTCTCTCCAACTGCTCAGAAGCTCTAAAAGCATGAAAAGTGGTTAAAATCTTAC 1554
Query 1000 -------------------------------------------------------------------------- 999
Sbjct 1555 AGGACCAAACCTGCATTATTTAATCAGTTAATACTCTGTGCATCACATGTTTAACATTTTCATTCAAGATGTGG 1628
Query 1000 -------------------------------------------------------------------------- 999
Sbjct 1629 AAAAAATCCCTCTGCTGAACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGA 1702
Query 1000 -------------------------------------------------------------------------- 999
Sbjct 1703 GAGAGACGTTCATTTTTCCCTAATGAAATGCAAGCATTCTGTTAGACCTATTATATTGCCTGTTAATTTGACTG 1776
Query 1000 -------------------------------------------------------------------------- 999
Sbjct 1777 TAATGAATAGGGGGTAGAAACAAAAGGATCAAGTGTGTTATAAAACATTTGATGTTAAAAGGAGACAATAAAAA 1850
Query 1000 ------------------ 999
Sbjct 1851 GGCAATGGTTTTTCAAAA 1868
