Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_14485
- Subject:
- XM_017009456.1
- Aligned Length:
- 2349
- Identities:
- 982
- Gaps:
- 1350
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGAAGGGCACGTGGACAGAAGCTCTCAGCCTACAGCACGGAGAATCATTAACAGTGATCCTGTAGATTTGGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCTAGTGGAAGAAAACACCTTTGTAGGTCCCCCACCCGCTACATCCATCAGTGGAGGCTCTGTTTATCCAACAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGCCTAATTGTAGCTCAGCCACATTCACAGGTAACCTCAGCTTCTTGGCAAGTCTACAGCTGTCTTCAGATGTT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGCTCCCTCTCCCCAACAAGCAATAATAGTAGGAGCAGCAGCAGCAGCAGCAATCAAAAAGCACCCTTGCCATG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCCACAGCAAGATGTATCTCGCCCACCACAGGCCTTGCCGTGCCCCCTGCGACCTTTGCCATGCCCACCGAGAG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CCTCACCATGTCCACCACGAGCCTCCTCATGCCCACCACGAGCCTTGTCATGCCCATCACAAACCATGCAGTGC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CAACTACCAGCTCTAACTCACCCACCTCAAGAAGTGCCATGCCCTCGGCAGAATATCCCAGGCCCACCTCAAGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTCTCTGGGCCTACCTCAAGATGTGCCAGGGCTGCCTCAAAGCATATTACATCCACAAGATGTGGCATACCTGC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AAGACATGCCACGGTCACCAGGAGATGTGCCACAGTCACCAAGTGATGTTTCACCGTCACCAGATGCACCACAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TCACCAGGGGGCATGCCACACTTACCGGGAGATGTGTTACATTCACCTGGAGACATGCCACACTCATCAGGGGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CGTGACACACTCACCTAGAGACATCCCTCACTTACCAGGAGACAGGCCTGACTTTACCCAGAATGATGTACAGA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ACCGTGACATGCCTATGGATATCTCAGCTCTGTCCTCTCCAAGCTGCTCTCCCAGCCCACAGTCTGAAACTCCC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TTAGAGAAAGTTCCTTGGCTCTCTGTCATGGAAACCCCAGCCAGAAAAGAAATATCACTGTCAGAGCCTGCCAA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 ACCTGGGTCTGCCCACGTACAATCACGAACACCACAAGGTGGGTTGTACAACAGACCATGCCTGCATAGACTGA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGTACTTCTTACGTCCTCCGGTTCATCACCTCTTCTTTCAGACGCTAATACCGGATAAAGACACAAGAGAGAAC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AAGGGTCAAAAATTAGAACCCATCCCTCATCGAAGACTAAGAATGGTAACAAATACCATTGAAGAGAATTTTCC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TCTGGGGACTGTGCAGTTTTTGATGGACTTTGTGTCACCCCAGCATTACCCACCAAGAGAAATCGTGGCTCACA 1258
Query 1 ---------------------------------------------------ATGCCTAGATCC----------- 12
|.|||||.||.|
Sbjct 1259 TCATCCAGAAAATCTTGCTCAGTGGCTCTGAGACTGTGGATGTCCTAAAGGAGGCCTACATGCTTCTCATGAAA 1332
Query 13 ATTGAACAAGTA-AT------AATACTTAAAAAATGGTTT----CTGAAACCT-------TAT----------- 57
|||.||||..|| || |||.|..|.|.|.|||..| |||.||.|| |||
Sbjct 1333 ATTCAACAGCTACATCCAGCCAATGCCAAGACAGTGGAGTGGGACTGGAAACTGCTCACCTATGTCATGGAGGA 1406
Query 58 -AAGGGACAAACTCTGCCTGGGCGAGTCCTTTTCCTGCGTTATGTCGTTCAGACCCTAGAAGATGACTTTCAGC 130
.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 AGAGGGACAAACTCTGCCTGGGCGAGTCCTTTTCCTGCGTTATGTCGTTCAGACCCTAGAAGATGACTTTCAGC 1480
Query 131 AGACCCTGAGGAGGCAACGGCAGCACCTGCAGCAATCCATTGCAAACATGGTGCTTTCCTGTGACAAGCAGCCC 204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 AGACCCTGAGGAGGCAACGGCAGCACCTGCAGCAATCCATTGCAAACATGGTGCTTTCCTGTGACAAGCAGCCC 1554
Query 205 CACAATGTCAGGGATGTTATCAAGTGGCTGGTCAAAGCAGTAACTGAAGATGGATTGACTCAGCCCCCAAATGG 278
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 CACAATGTCAGGGATGTTATCAAGTGGCTGGTCAAAGCAGTAACTGAAGATGGATTGACTCAGCCCCCAAATGG 1628
Query 279 AAATCAAACGTCTTCAGGAACAGGAATCTTGAAAGCCAGCAGTAGCCACCCTTCTTCCCAGCCCAACCTGACAA 352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 AAATCAAACGTCTTCAGGAACAGGAATCTTGAAAGCCAGCAGTAGCCACCCTTCTTCCCAGCCCAACCTGACAA 1702
Query 353 AGAACACCAATCAGCTGATTGTGTGCCAGCTTCAGAGGATGCTCTCCATAGCCGTAGAGGTGGACAGGACCCCC 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 AGAACACCAATCAGCTGATTGTGTGCCAGCTTCAGAGGATGCTCTCCATAGCCGTAGAGGTGGACAGGACCCCC 1776
Query 427 ACCTGCAGCTCCAATAAAATTGCCGAGATGATGTTTGGGTTTGTGCTGGACATTCCTGAGAGGAGCCAGAGAGA 500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 ACCTGCAGCTCCAATAAAATTGCCGAGATGATGTTTGGGTTTGTGCTGGACATTCCTGAGAGGAGCCAGAGAGA 1850
Query 501 AATGTTCTTTACTACCATGGAAAGCCACCTTCTGCGCTGCAAAGTGTTAGAAATCATATTCCTCCACAGCTGTG 574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 AATGTTCTTTACTACCATGGAAAGCCACCTTCTGCGCTGCAAAGTGTTAGAAATCATATTCCTCCACAGCTGTG 1924
Query 575 AGACACCCACCCGCCTGCCTCTGTCTCTGGCCCAGGCCCTCTACTTTCTGAATAATTCTACGTCACTGCTCAAG 648
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 AGACACCCACCCGCCTGCCTCTGTCTCTGGCCCAGGCCCTCTACTTTCTGAATAATTCTACGTCACTGCTCAAG 1998
Query 649 TGTCAGTCAGATAAAAGCCAGTGGCAGACTTGGGACGAATTGGTTGAGCATCTGCAGTTTCTGCTGTCCAGTTA 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 TGTCAGTCAGATAAAAGCCAGTGGCAGACTTGGGACGAATTGGTTGAGCATCTGCAGTTTCTGCTGTCCAGTTA 2072
Query 723 TCAACATGTTTTAAGAGAACACTTAAGGAGTTCCGTGATCGACCGAAAGGACTTAATAATCAAAAGGATTAAGC 796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 TCAACATGTTTTAAGAGAACACTTAAGGAGTTCCGTGATCGACCGAAAGGACTTAATAATCAAAAGGATTAAGC 2146
Query 797 CCAAACCCCAGCAAGGAGATGACATCACAGTGGTAGACGTAGAGAAGCAGATTGAGGCCTTCCGCAGCCGCCTG 870
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 CCAAACCCCAGCAAGGAGATGACATCACAGTGGTAGACGTAGAGAAGCAGATTGAGGCCTTCCGCAGCCGCCTG 2220
Query 871 ATCCAGATGCTGGGGGAGCCTCTTGTCCCCCAACTCCAAGACAAAGTGCACTTGTTGAAGCTCCTGCTCTTCTA 944
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 ATCCAGATGCTGGGGGAGCCTCTTGTCCCCCAACTCCAAGACAAAGTGCACTTGTTGAAGCTCCTGCTCTTCTA 2294
Query 945 TGCTGCGGACTTGAACCCTGATGCAGAGCCCTTTCAAAAGGGCTGGAGCGGCTCC 999
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 TGCTGCGGACTTGAACCCTGATGCAGAGCCCTTTCAAAAGGGCTGGAGCGGCTCC 2349
