Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_14524
- Subject:
- XM_006513097.3
- Aligned Length:
- 3805
- Identities:
- 1593
- Gaps:
- 1988
Alignment
Query 1 ATGAGACTGTTCGTGAGTGATGGCGTCCCGGGTTGCTTGCCGGTGCTGGCCGCCGCCGGGAGAGCCCGGGGCAG 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 AGCAGAGGTGCTCATCAGCACTGTAGGCCCGGAAGATTGTGTGGTCCCGTTCCTGACCCGGCCTAAGGTCCCTG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 TCTTGCAGCTGGATAGCGGCAACTACCTCTTCTCCACTAGTGCAATCTGCCGATATTTTTTTTTGTTATCTGGC 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 TGGGAGCAAGATGACCTCACTAACCAGTGGCTGGAATGGGAAGCGACAGAGCTGCAGCCAGCTTTGTCTGCTGC 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 CCTGTACTATTTAGTGGTCCAAGGCAAGAAGGGGGAAGATGTTCTTGGTTCAGTGCGGAGAGCCCTGACTCACA 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 TTGACCACAGCTTGAGTCGTCAGAACTGTCCTTTCCTGGCTGGGGAGACAGAATCTCTAGCCGACATTGTTTTG 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 TGGGGAGCCCTATACCCATTACTGCAAGATCCCGCCTACCTCCCTGAGGAGCTGAGTGCCCTGCACAGCTGGTT 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 CCAGACACTGAGTACCCAGGAACCATGTCAGCGAGCTGCAGAGACTGTACTGAAACAGCAAGGTGTCCTGGCTC 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 TCCGGCCTTACCTCCAAAAGCAGCCCCAGCCCAGCCCCGCTGAGGGAAGGGCTGTCACCAATGAGCCTGAGGAG 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 GAGGAGCTGGCTACCCTATCTGAGGAGGAGATTGCTATGGCTGTTACTGCTTGGGAGAAGGGCCTAGAAAGTTT 740
Sbjct 1 -------------------------------------------------------------------------- 0
Query 741 GCCCCCGCTGCGGCCCCAGCAGAATCCAGTGTTGCCTGTGGCTGGAGAAAGGAATGTGCTCATCACCAGTGCCC 814
Sbjct 1 -------------------------------------------------------------------------- 0
Query 815 TCCCTTACGTCAACAATGTCCCCCACCTTGGGAACATCATTGGTTGTGTGCTCAGTGCCGATGTCTTTGCCAGG 888
Sbjct 1 -------------------------------------------------------------------------- 0
Query 889 TACTCTCGCCTCCGCCAGTGGAACACCCTCTATCTGTGTGGGACAGATGAGTATGGTACAGCAACAGAGACCAA 962
Sbjct 1 -------------------------------------------------------------------------- 0
Query 963 GGCTCTGGAGGAGGGACTAACCCCCCAGGAGATCTGCGACAAGTACCACATCATCCATGCTGACATCTACCGCT 1036
||| |||.|| |
Sbjct 1 --------------------------------------------------------ATG----CATGTA----T 10
Query 1037 GGTTTAACATTTCGTTTGATATTTTTGGTCGCACCACCACT-----CCACAGC---AGACCAAAATCACCCAGG 1102
|.||||| ..||.||.|.| ||.|.|| |||.||| .||||||..|.|
Sbjct 11 GTTTTAA--------AGGAAATGTGT--------CATCCCTATGGCCCAGAGCTCTTGACCAAGGTGA------ 62
Query 1103 ACATTTTCCAGCAGTTGCTGAAACGAGGTTTTGTGCTGCAAGATACTGTGGAGCAACTGCGATG----TGAGCA 1172
|||||||| |.||| |||| .|||.||| ||| ||||||
Sbjct 63 --------CAGCAGTT-------CCAGG-----------AAGA-------CAGCCACT---ATGTCTCTGAGCA 100
Query 1173 CTGTGCTCGCTTCCTGGCTGACCGCTTCGTGGAGGGCGTGTGTCCCTTCTGTGGCTATGAGGAGGCTCGGGGTG 1246
|||| |||| |||||
Sbjct 101 --GTGC---CTTC-------------------AGGGC------------------------------------- 113
Query 1247 ACCAGTGTGACAAGTGTGGCAA---------GCTCATCA-ATGCTGTCGAG-CTTAAGAAAATGGAGCTGGCGC 1309
||||| |||| |.|||||| ||| ||| .||.||||||||||||||||||
Sbjct 114 -----TGTGA--------GCAACGACCCCCGGATCATCACATG-----GAGAATTGAGAAAATGGAGCTGGCGC 169
Query 1310 TGGTGCCTGTGAGCGCCCACGGCAACTTCTATGAGGGGGACTGCTACGTCATCCTCTCGACCCGGAGAGTGGCC 1383
|||||||..||||.||.||||||||||||||.|||||.|||||||||.||.|||||||||||||||||||||.|
Sbjct 170 TGGTGCCCCTGAGTGCTCACGGCAACTTCTACGAGGGAGACTGCTACATCGTCCTCTCGACCCGGAGAGTGGGC 243
Query 1384 AGTCTCCTATCCCAGGACATCCACTTCTGGATCGGGAAGGACTCCTCCCAGGATGAGCAAAGCTGCGCAGCCAT 1457
||.||.||.||||||.||||||||||.||||||||||||||||||||||||||.|||||.||||||||.|||||
Sbjct 244 AGCCTTCTCTCCCAGAACATCCACTTTTGGATCGGGAAGGACTCCTCCCAGGACGAGCAGAGCTGCGCGGCCAT 317
Query 1458 ATATACCACACAGCTGGACGACTACCTGGGAGGCAGCCCTGTGCAGCACCGAGAGGTCCAGTACCATGAGTCAG 1531
.|||||||||||||||||.||||||||||||||||||||.|||||||||||.||||||||||||||.|||||.|
Sbjct 318 CTATACCACACAGCTGGATGACTACCTGGGAGGCAGCCCGGTGCAGCACCGTGAGGTCCAGTACCACGAGTCCG 391
Query 1532 ACACTTTCCGTGGCTACTTCAAGCAGGGCATCATCTACAAGCAGGGGGGTGTCGCCTCTGGGATGAAGCACGTG 1605
||||.||||||||||||||||||||||||||||||||.||..||||||||||.|||||||||||||||||||||
Sbjct 392 ACACCTTCCGTGGCTACTTCAAGCAGGGCATCATCTATAAAAAGGGGGGTGTGGCCTCTGGGATGAAGCACGTG 465
Query 1606 GAGACCAATACCTACGACGTGAAGCGGCTGCTACATGTGAAAGGGAAAAGAAACATC----------AGG---- 1665
||||||||.|||||.||.||||||.||||||||||.||.||.||||||||||||||| |||
Sbjct 466 GAGACCAACACCTATGATGTGAAGAGGCTGCTACACGTAAAGGGGAAAAGAAACATCCAAGCCACGGAGGTGAG 539
Query 1666 ------------------------------GCTACCG------------------------------------- 1672
|||.|||
Sbjct 540 TCTCACACGTGAGTGTCCTGGGTGCCCGGTGCTCCCGCCCTGGCACCTAAGACTGCCCCGAACCGCTCTGACTG 613
Query 1673 ---------AGGTGGAAATGAGCTGGGACAGTTTCAACCGAGGTGATGTCTTCTTGCTGGACCTTGGGAAAGTC 1737
||||||||||||||||||||||.||.||||||||.|||||||||.|||||||||||||||..|||
Sbjct 614 CTCACACGCAGGTGGAAATGAGCTGGGACAGCTTTAACCGAGGCGATGTCTTCCTGCTGGACCTTGGGATGGTC 687
Query 1738 ATCATCCAATGGAATGGCCCAGAGAGCAACAGTGGGGAGCGCCTGAAGGCTATGCTTCTGGCAAAGGATATTCG 1811
||||||||.|||||||||||.|||||||||||||||||.||.||.|||||||||||||||||||||||.|||||
Sbjct 688 ATCATCCAGTGGAATGGCCCGGAGAGCAACAGTGGGGAACGTCTCAAGGCTATGCTTCTGGCAAAGGACATTCG 761
Query 1812 AGACAGGGAGCGAGGGGGCCGTGCTGAAATAGGAGTGATCGAGGGAGACAAGGAGGCAGCCAGCCCAGAGCTGA 1885
.|||||||||||||||||||||||||||||.||.|||||.|||||||||||||||||.||||||||||.|||||
Sbjct 762 GGACAGGGAGCGAGGGGGCCGTGCTGAAATTGGGGTGATTGAGGGAGACAAGGAGGCGGCCAGCCCAGGGCTGA 835
Query 1886 TGAAGGTCCTTCAGGACACCCTTGGCCGACGCTCCATTATCAAGCCTACAGTCCCTGATGAGATCATAGATCAG 1959
|||..|||||.|||||.||||||||.|||||||||||.||.||||||.||||..|||||||||||||.||.||.
Sbjct 836 TGACAGTCCTCCAGGATACCCTTGGTCGACGCTCCATGATAAAGCCTGCAGTTTCTGATGAGATCATGGACCAA 909
Query 1960 AAGCAGAAATCAACTATCATGTTGTATCATATCTCAGATTCAGCTGGGCAGCTGGCAGTCACAGAGGTAGCAAC 2033
.|.||||||||||.|||||||||.||||||.||||.||..||||||||||||||.|||||||||||||.|||||
Sbjct 910 CAACAGAAATCAAGTATCATGTTATATCATGTCTCCGACACAGCTGGGCAGCTGTCAGTCACAGAGGTGGCAAC 983
Query 2034 AAGGCCTCTGGTCCAGGACTTACTGAACCATGATGACTGCTACATCCTGGACCAAAGTGGAACCAAAATCTACG 2107
||||||.||||||||||||.||||||||||.|||||||||||||||||||||||||||||.|||||.|||||||
Sbjct 984 AAGGCCCCTGGTCCAGGACCTACTGAACCACGATGACTGCTACATCCTGGACCAAAGTGGCACCAAGATCTACG 1057
Query 2108 TGTGGAAAGGAAAAGGAGCCACAAAGGCTGAAAAACAGGCAGCCATGTCTAAAGCGCTGGGCTTCATCAAGATG 2181
||||||||||.|||||||||||.||||.|||.||||||||.||||||||.|||||.||||..||||||||||||
Sbjct 1058 TGTGGAAAGGCAAAGGAGCCACCAAGGTTGAGAAACAGGCGGCCATGTCCAAAGCCCTGGATTTCATCAAGATG 1131
Query 2182 AAGAGCTACCCCAGCAGCACCAATGTGGAGACCGTCAACGATGGTGCTGAGTCGGCCATGTTCAAGCAGCTGTT 2255
|||.|.|||||||||||||||||.||||||||||||||||||||.||.|||||||||||||||||.|||.||||
Sbjct 1132 AAGGGATACCCCAGCAGCACCAACGTGGAGACCGTCAACGATGGCGCAGAGTCGGCCATGTTCAAACAGTTGTT 1205
Query 2256 CCAGAAGTGGTCAGTAAAGGACCAGACCATGGGCCTGGGGAAAACGTTCAGCATTGGTAAAATTGCTAAAGTTT 2329
||||||.|||||.||.|||||||||||||.||||.|||||||||..|||||||.|||||||||.||||||.|.|
Sbjct 1206 CCAGAAATGGTCGGTGAAGGACCAGACCACGGGCTTGGGGAAAATATTCAGCACTGGTAAAATCGCTAAAATCT 1279
Query 2330 TCCAGGATAAATTTGATGTGACTCTGCTACACACCAAGCCAGAGGTAGCTGCCCAGGAAAGAATGGTCGATGAT 2403
|||||||.||.||.||||||.||||||||||||||||||||||.||.|||||.|||||.||||||||.||.||.
Sbjct 1280 TCCAGGACAAGTTCGATGTGTCTCTGCTACACACCAAGCCAGAAGTGGCTGCACAGGAGAGAATGGTGGACGAC 1353
Query 2404 GGCAACGGAAAAGTTGAGGTCTGGAGAATTGAGAACCTGGAGCTGGTCCCTGTGGAGTATCAATGGTATGGCTT 2477
|||||.||..|.||||||||||||||||||||||||||||||||||||||.|||||.||.||.|||.|||||||
Sbjct 1354 GGCAAAGGCCAGGTTGAGGTCTGGAGAATTGAGAACCTGGAGCTGGTCCCCGTGGAATACCAGTGGCATGGCTT 1427
Query 2478 CTTTTATGGGGGAGACTGTTATCTGGTCCTCTACACATACGAGGTAAATGGGAAGCCACATCACATCTTGTACA 2551
|||.||.|||||||||||.||||||||.||||||||.|||||.||.||.|||||.||.|||.||||||||||||
Sbjct 1428 CTTCTACGGGGGAGACTGCTATCTGGTTCTCTACACGTACGATGTGAACGGGAAACCCCATTACATCTTGTACA 1501
Query 2552 TCTGGCAGGGCCGCCACGCCTCACAGGATGAGCTGGCAGCCTCAGCATACCAGGCAGTGGAGGTGGATCGGCAG 2625
|||||||||||||||||||.||.|.|||||||||||||||||||||.||.|.|||||||||||||||||.||||
Sbjct 1502 TCTGGCAGGGCCGCCACGCATCCCGGGATGAGCTGGCAGCCTCAGCCTATCGGGCAGTGGAGGTGGATCAGCAG 1575
Query 2626 TTTGATGGGGCTGCTGTGCAGGTTCGAGTCAGGATGGGAACGGAGCCACGCCACTTCATGGCCATCTTCAAAGG 2699
||||||||.||..||||||||||.||.||.||.|||||.|.|||||||||||||||||||||||||||||||||
Sbjct 1576 TTTGATGGAGCCCCTGTGCAGGTCCGGGTTAGCATGGGGAAGGAGCCACGCCACTTCATGGCCATCTTCAAAGG 1649
Query 2700 GAAGCTAGTTATCTTTGAGGGTGGGACTTCCAGGAAGGGAAATGCCGAGCCTGACCCTCCAGTAAGACTCTTCC 2773
.|||||.|||||||..|||||.||||||||||||||||||||.|..|||||.||||||||||||||.|||||||
Sbjct 1650 AAAGCTGGTTATCTACGAGGGCGGGACTTCCAGGAAGGGAAACGAGGAGCCGGACCCTCCAGTAAGGCTCTTCC 1723
Query 2774 AAATTCATGGAAATGACAAATCTAACACCAAAGCAGTGGAAGTTCCAGCCTTTGCCTCCTCCCTAAACTCCAAT 2847
|.||.||.||.||.||||||||.|||||||||||||||||.||..|.||||.|||.|||||.||.||||||||.
Sbjct 1724 AGATCCACGGGAACGACAAATCCAACACCAAAGCAGTGGAGGTCTCGGCCTCTGCTTCCTCGCTCAACTCCAAC 1797
Query 2848 GATGTCTTTCTGCTGCGAACTCAGGCAGAGCACTACCTGTGGTATGGCAAGG----TAG--------------- 2902
||.||||||||||||||.||||||||||||||||||||||||||.||||||| |||
Sbjct 1798 GACGTCTTTCTGCTGCGGACTCAGGCAGAGCACTACCTGTGGTACGGCAAGGGGTCTAGTGGGGACGAGCGGGC 1871
Query 2903 GATGGCTGGGCCCCGGGTCAGACC---------------------------------AGCCCCTCGGAGCCCAG 2943
|||||||..|...|.|||| |||| ||..|| .||||||
Sbjct 1872 GATGGCTAAGGAGCTGGTC-GACCTTCTCTGTGATGGCAATGCGGACACTGTGGCTGAGGGCC-AGGAGCC--- 1940
Query 2944 ACCTGCACTCCCCT----CCTCCTG---------TCAGC-------AAGGTCAAANG-----ACCTAGAG---- 2988
|||||...| || |||.||| .|||| ||.|.||||.| |.|.|||.
Sbjct 1941 ACCTGAGTT---CTGGGACCTTCTGGGAGGAAAAACAGCCTACGCTAATGACAAAAGGCTGCAGCAAGAAACCC 2011
Query 2989 -------------------------------------------------------------------------- 2988
Sbjct 2012 TGGACGTCCAGGTCCGGCTCTTTGAGTGTTCCAATAAGACTGGCCGCTTCCTTGTTACGGAGGTCACGGACTTC 2085
Query 2989 -------------------------------------------------------------------------- 2988
Sbjct 2086 ACCCAGGAGGACCTGAGCCCAGGTGATGTGATGCTTCTGGACACCTGGGACCAGGTGTTCTTGTGGATAGGAGC 2159
Query 2989 -------------------------------------------------------------------------- 2988
Sbjct 2160 GGAGGCCAATGCCACGGAGAAGAAGGGGGCCCTCTCGACGGCTCAGGAGTACCTGGTCACACATCCTAGTGGCC 2233
Query 2989 -------------------------------------------------------------------------- 2988
Sbjct 2234 GAGACCCCGACACACCGATTCTGATCATCAAACAGGGCTTTGAGCCCCCCACCTTCACAGGCTGGTTCCTGGCA 2307
Query 2989 -------------------------------------------------------------------------- 2988
Sbjct 2308 TGGGACCCTCACATTTGGAGCGAAGGAAAATCATATGAGCAGCTAAAGAACGAGCTGGGAGATGCAACTGCCAT 2381
Query 2989 -------------------------------------------------------------------------- 2988
Sbjct 2382 TGTGCGAATCACCGCTGACATGAAGAACGCAACACTTTACCTGAATCCTAGTGACGGTGAGCCAAAGTACTACC 2455
Query 2989 -------------------------------------------------------------------------- 2988
Sbjct 2456 CGGTGGAAGTTCTGCTGAAAGGTCAGAACCAGGAGCTGCCTGAGGATGTGGACCCCGCCAAAAAGGAGAACTAC 2529
Query 2989 -------------------------------------------------------------------------- 2988
Sbjct 2530 CTCTCGGAACAAGACTTTGTATCTGTGTTTGGCATCACGAGAGGGCAGTTCACTGCTCTGCCTGGCTGGAAACA 2603
Query 2989 ------------------------------- 2988
Sbjct 2604 GCTCCAGCTGAAGAAAGAAAGGGGCCTTTTC 2634
