Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_14524
Subject:
XM_006513101.2
Aligned Length:
3796
Identities:
1526
Gaps:
2057

Alignment

Query    1  ATGAGACTGTTCGTGAGTGATGGCGTCCCGGGTTGCTTGCCGGTGCTGGCCGCCGCCGGGAGAGCCCGGGGCAG  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  AGCAGAGGTGCTCATCAGCACTGTAGGCCCGGAAGATTGTGTGGTCCCGTTCCTGACCCGGCCTAAGGTCCCTG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  TCTTGCAGCTGGATAGCGGCAACTACCTCTTCTCCACTAGTGCAATCTGCCGATATTTTTTTTTGTTATCTGGC  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  TGGGAGCAAGATGACCTCACTAACCAGTGGCTGGAATGGGAAGCGACAGAGCTGCAGCCAGCTTTGTCTGCTGC  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  CCTGTACTATTTAGTGGTCCAAGGCAAGAAGGGGGAAGATGTTCTTGGTTCAGTGCGGAGAGCCCTGACTCACA  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  TTGACCACAGCTTGAGTCGTCAGAACTGTCCTTTCCTGGCTGGGGAGACAGAATCTCTAGCCGACATTGTTTTG  444
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  445  TGGGGAGCCCTATACCCATTACTGCAAGATCCCGCCTACCTCCCTGAGGAGCTGAGTGCCCTGCACAGCTGGTT  518
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  519  CCAGACACTGAGTACCCAGGAACCATGTCAGCGAGCTGCAGAGACTGTACTGAAACAGCAAGGTGTCCTGGCTC  592
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  593  TCCGGCCTTACCTCCAAAAGCAGCCCCAGCCCAGCCCCGCTGAGGGAAGGGCTGTCACCAATGAGCCTGAGGAG  666
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  667  GAGGAGCTGGCTACCCTATCTGAGGAGGAGATTGCTATGGCTGTTACTGCTTGGGAGAAGGGCCTAGAAAGTTT  740
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  741  GCCCCCGCTGCGGCCCCAGCAGAATCCAGTGTTGCCTGTGGCTGGAGAAAGGAATGTGCTCATCACCAGTGCCC  814
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  815  TCCCTTACGTCAACAATGTCCCCCACCTTGGGAACATCATTGGTTGTGTGCTCAGTGCCGATGTCTTTGCCAGG  888
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  889  TACTCTCGCCTCCGCCAGTGGAACACCCTCTATCTGTGTGGGACAGATGAGTATGGTACAGCAACAGAGACCAA  962
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  963  GGCTCTGGAGGAGGGACTAACCCCCCAGGAGATCTGCGACAAGTACCACATCATCCATGCTGACATCTACCGCT  1036
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query 1037  GGTTTAACATTTCGTTTGATATTTTTGGTCGCACCACCACTCCACAGCAGACCAAAATCACCCAGGACATTTTC  1110
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query 1111  CAGCAGTTGCTGAAACGAGGTTTTGTGCTGCAAGATACTGTGGAGCAACTGCGATGTGAGCACTGTGCTCGCTT  1184
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query 1185  CCTGGCTGACCGCTTCGTGGAGGGCGTGTGTCCCTTCTGTGGCTATGAGGAG-GC--TCGGGGTGACCAGTGTG  1255
                                                  .||.||.||||.|| ||  ||.|||      .||||
Sbjct    1  --------------------------------------ATGTCTCTGAGCAGTGCCTTCAGGG------CTGTG  30

Query 1256  ACAAGTGTGGCAA---------GCTCATCA-ATGCTGTCGAG-CTTAAGAAAATGGAGCTGGCGCTGGTGCCTG  1318
            |        ||||         |.|||||| |||     ||| .||.|||||||||||||||||||||||||..
Sbjct   31  A--------GCAACGACCCCCGGATCATCACATG-----GAGAATTGAGAAAATGGAGCTGGCGCTGGTGCCCC  91

Query 1319  TGAGCGCCCACGGCAACTTCTATGAGGGGGACTGCTACGTCATCCTCTCGACCCGGAGAGTGGCCAGTCTCCTA  1392
            ||||.||.||||||||||||||.|||||.|||||||||.||.|||||||||||||||||||||.|||.||.||.
Sbjct   92  TGAGTGCTCACGGCAACTTCTACGAGGGAGACTGCTACATCGTCCTCTCGACCCGGAGAGTGGGCAGCCTTCTC  165

Query 1393  TCCCAGGACATCCACTTCTGGATCGGGAAGGACTCCTCCCAGGATGAGCAAAGCTGCGCAGCCATATATACCAC  1466
            ||||||.||||||||||.||||||||||||||||||||||||||.|||||.||||||||.|||||.||||||||
Sbjct  166  TCCCAGAACATCCACTTTTGGATCGGGAAGGACTCCTCCCAGGACGAGCAGAGCTGCGCGGCCATCTATACCAC  239

Query 1467  ACAGCTGGACGACTACCTGGGAGGCAGCCCTGTGCAGCACCGAGAGGTCCAGTACCATGAGTCAGACACTTTCC  1540
            |||||||||.||||||||||||||||||||.|||||||||||.||||||||||||||.|||||.|||||.||||
Sbjct  240  ACAGCTGGATGACTACCTGGGAGGCAGCCCGGTGCAGCACCGTGAGGTCCAGTACCACGAGTCCGACACCTTCC  313

Query 1541  GTGGCTACTTCAAGCAGGGCATCATCTACAAGCAGGGGGGTGTCGCCTCTGGGATGAAGCACGTGGAGACCAAT  1614
            ||||||||||||||||||||||||||||.||..||||||||||.|||||||||||||||||||||||||||||.
Sbjct  314  GTGGCTACTTCAAGCAGGGCATCATCTATAAAAAGGGGGGTGTGGCCTCTGGGATGAAGCACGTGGAGACCAAC  387

Query 1615  ACCTACGACGTGAAGCGGCTGCTACATGTGAAAGGGAAAAGAAACATC----------AGG-------------  1665
            |||||.||.||||||.||||||||||.||.||.|||||||||||||||          |||             
Sbjct  388  ACCTATGATGTGAAGAGGCTGCTACACGTAAAGGGGAAAAGAAACATCCAAGCCACGGAGGTGAGTCTCACACG  461

Query 1666  ---------------------GCTACCG----------------------------------------------  1672
                                 |||.|||                                              
Sbjct  462  TGAGTGTCCTGGGTGCCCGGTGCTCCCGCCCTGGCACCTAAGACTGCCCCGAACCGCTCTGACTGCTCACACGC  535

Query 1673  AGGTGGAAATGAGCTGGGACAGTTTCAACCGAGGTGATGTCTTCTTGCTGGACCTTGGGAAAGTCATCATCCAA  1746
            ||||||||||||||||||||||.||.||||||||.|||||||||.|||||||||||||||..|||||||||||.
Sbjct  536  AGGTGGAAATGAGCTGGGACAGCTTTAACCGAGGCGATGTCTTCCTGCTGGACCTTGGGATGGTCATCATCCAG  609

Query 1747  TGGAATGGCCCAGAGAGCAACAGTGGGGAGCGCCTGAAGGCTATGCTTCTGGCAAAGGATATTCGAGACAGGGA  1820
            |||||||||||.|||||||||||||||||.||.||.|||||||||||||||||||||||.|||||.||||||||
Sbjct  610  TGGAATGGCCCGGAGAGCAACAGTGGGGAACGTCTCAAGGCTATGCTTCTGGCAAAGGACATTCGGGACAGGGA  683

Query 1821  GCGAGGGGGCCGTGCTGAAATAGGAGTGATCGAGGGAGACAAGGAGGCAGCCAGCCCAGAGCTGATGAAGGTCC  1894
            |||||||||||||||||||||.||.|||||.|||||||||||||||||.||||||||||.||||||||..||||
Sbjct  684  GCGAGGGGGCCGTGCTGAAATTGGGGTGATTGAGGGAGACAAGGAGGCGGCCAGCCCAGGGCTGATGACAGTCC  757

Query 1895  TTCAGGACACCCTTGGCCGACGCTCCATTATCAAGCCTACAGTCCCTGATGAGATCATAGATCAGAAGCAGAAA  1968
            |.|||||.||||||||.|||||||||||.||.||||||.||||..|||||||||||||.||.||..|.||||||
Sbjct  758  TCCAGGATACCCTTGGTCGACGCTCCATGATAAAGCCTGCAGTTTCTGATGAGATCATGGACCAACAACAGAAA  831

Query 1969  TCAACTATCATGTTGTATCATATCTCAGATTCAGCTGGGCAGCTGGCAGTCACAGAGGTAGCAACAAGGCCTCT  2042
            ||||.|||||||||.||||||.||||.||..||||||||||||||.|||||||||||||.|||||||||||.||
Sbjct  832  TCAAGTATCATGTTATATCATGTCTCCGACACAGCTGGGCAGCTGTCAGTCACAGAGGTGGCAACAAGGCCCCT  905

Query 2043  GGTCCAGGACTTACTGAACCATGATGACTGCTACATCCTGGACCAAAGTGGAACCAAAATCTACGTGTGGAAAG  2116
            ||||||||||.||||||||||.|||||||||||||||||||||||||||||.|||||.||||||||||||||||
Sbjct  906  GGTCCAGGACCTACTGAACCACGATGACTGCTACATCCTGGACCAAAGTGGCACCAAGATCTACGTGTGGAAAG  979

Query 2117  GAAAAGGAGCCACAAAGGCTGAAAAACAGGCAGCCATGTCTAAAGCGCTGGGCTTCATCAAGATGAAGAGCTAC  2190
            |.|||||||||||.||||.|||.||||||||.||||||||.|||||.||||..|||||||||||||||.|.|||
Sbjct  980  GCAAAGGAGCCACCAAGGTTGAGAAACAGGCGGCCATGTCCAAAGCCCTGGATTTCATCAAGATGAAGGGATAC  1053

Query 2191  CCCAGCAGCACCAATGTGGAGACCGTCAACGATGGTGCTGAGTCGGCCATGTTCAAGCAGCTGTTCCAGAAGTG  2264
            ||||||||||||||.||||||||||||||||||||.||.|||||||||||||||||.|||.||||||||||.||
Sbjct 1054  CCCAGCAGCACCAACGTGGAGACCGTCAACGATGGCGCAGAGTCGGCCATGTTCAAACAGTTGTTCCAGAAATG  1127

Query 2265  GTCAGTAAAGGACCAGACCATGGGCCTGGGGAAAACGTTCAGCATTGGTAAAATTGCTAAAGTTTTCCAGGATA  2338
            |||.||.|||||||||||||.||||.|||||||||..|||||||.|||||||||.||||||.|.||||||||.|
Sbjct 1128  GTCGGTGAAGGACCAGACCACGGGCTTGGGGAAAATATTCAGCACTGGTAAAATCGCTAAAATCTTCCAGGACA  1201

Query 2339  AATTTGATGTGACTCTGCTACACACCAAGCCAGAGGTAGCTGCCCAGGAAAGAATGGTCGATGATGGCAACGGA  2412
            |.||.||||||.||||||||||||||||||||||.||.|||||.|||||.||||||||.||.||.|||||.||.
Sbjct 1202  AGTTCGATGTGTCTCTGCTACACACCAAGCCAGAAGTGGCTGCACAGGAGAGAATGGTGGACGACGGCAAAGGC  1275

Query 2413  AAAGTTGAGGTCTGGAGAATTGAGAACCTGGAGCTGGTCCCTGTGGAGTATCAATGGTATGGCTTCTTTTATGG  2486
            .|.||||||||||||||||||||||||||||||||||||||.|||||.||.||.|||.||||||||||.||.||
Sbjct 1276  CAGGTTGAGGTCTGGAGAATTGAGAACCTGGAGCTGGTCCCCGTGGAATACCAGTGGCATGGCTTCTTCTACGG  1349

Query 2487  GGGAGACTGTTATCTGGTCCTCTACACATACGAGGTAAATGGGAAGCCACATCACATCTTGTACATCTGGCAGG  2560
            |||||||||.||||||||.||||||||.|||||.||.||.|||||.||.|||.|||||||||||||||||||||
Sbjct 1350  GGGAGACTGCTATCTGGTTCTCTACACGTACGATGTGAACGGGAAACCCCATTACATCTTGTACATCTGGCAGG  1423

Query 2561  GCCGCCACGCCTCACAGGATGAGCTGGCAGCCTCAGCATACCAGGCAGTGGAGGTGGATCGGCAGTTTGATGGG  2634
            ||||||||||.||.|.|||||||||||||||||||||.||.|.|||||||||||||||||.||||||||||||.
Sbjct 1424  GCCGCCACGCATCCCGGGATGAGCTGGCAGCCTCAGCCTATCGGGCAGTGGAGGTGGATCAGCAGTTTGATGGA  1497

Query 2635  GCTGCTGTGCAGGTTCGAGTCAGGATGGGAACGGAGCCACGCCACTTCATGGCCATCTTCAAAGGGAAGCTAGT  2708
            ||..||||||||||.||.||.||.|||||.|.|||||||||||||||||||||||||||||||||.|||||.||
Sbjct 1498  GCCCCTGTGCAGGTCCGGGTTAGCATGGGGAAGGAGCCACGCCACTTCATGGCCATCTTCAAAGGAAAGCTGGT  1571

Query 2709  TATCTTTGAGGGTGGGACTTCCAGGAAGGGAAATGCCGAGCCTGACCCTCCAGTAAGACTCTTCCAAATTCATG  2782
            |||||..|||||.||||||||||||||||||||.|..|||||.||||||||||||||.||||||||.||.||.|
Sbjct 1572  TATCTACGAGGGCGGGACTTCCAGGAAGGGAAACGAGGAGCCGGACCCTCCAGTAAGGCTCTTCCAGATCCACG  1645

Query 2783  GAAATGACAAATCTAACACCAAAGCAGTGGAAGTTCCAGCCTTTGCCTCCTCCCTAAACTCCAATGATGTCTTT  2856
            |.||.||||||||.|||||||||||||||||.||..|.||||.|||.|||||.||.||||||||.||.||||||
Sbjct 1646  GGAACGACAAATCCAACACCAAAGCAGTGGAGGTCTCGGCCTCTGCTTCCTCGCTCAACTCCAACGACGTCTTT  1719

Query 2857  CTGCTGCGAACTCAGGCAGAGCACTACCTGTGGTATGGCAAGG----TAG---------------GATGGCTGG  2911
            ||||||||.||||||||||||||||||||||||||.|||||||    |||               |||||||..
Sbjct 1720  CTGCTGCGGACTCAGGCAGAGCACTACCTGTGGTACGGCAAGGGGTCTAGTGGGGACGAGCGGGCGATGGCTAA  1793

Query 2912  GCCCCGGGTCAGACC---------------------------------AGCCCCTCGGAGCCCAGACCTGCACT  2952
            |...|.|||| ||||                                 ||..|| .||||||   |||||...|
Sbjct 1794  GGAGCTGGTC-GACCTTCTCTGTGATGGCAATGCGGACACTGTGGCTGAGGGCC-AGGAGCC---ACCTGAGTT  1862

Query 2953  CCCCT----CCTCCTG---------TCAGC-------AAGGTCAAANG-----ACCTAGAG-------------  2988
               ||    |||.|||         .||||       ||.|.||||.|     |.|.|||.             
Sbjct 1863  ---CTGGGACCTTCTGGGAGGAAAAACAGCCTACGCTAATGACAAAAGGCTGCAGCAAGAAACCCTGGACGTCC  1933

Query 2989  --------------------------------------------------------------------------  2988
                                                                                      
Sbjct 1934  AGGTCCGGCTCTTTGAGTGTTCCAATAAGACTGGCCGCTTCCTTGTTACGGAGGTCACGGACTTCACCCAGGAG  2007

Query 2989  --------------------------------------------------------------------------  2988
                                                                                      
Sbjct 2008  GACCTGAGCCCAGGTGATGTGATGCTTCTGGACACCTGGGACCAGGTGTTCTTGTGGATAGGAGCGGAGGCCAA  2081

Query 2989  --------------------------------------------------------------------------  2988
                                                                                      
Sbjct 2082  TGCCACGGAGAAGAAGGGGGCCCTCTCGACGGCTCAGGAGTACCTGGTCACACATCCTAGTGGCCGAGACCCCG  2155

Query 2989  --------------------------------------------------------------------------  2988
                                                                                      
Sbjct 2156  ACACACCGATTCTGATCATCAAACAGGGCTTTGAGCCCCCCACCTTCACAGGCTGGTTCCTGGCATGGGACCCT  2229

Query 2989  --------------------------------------------------------------------------  2988
                                                                                      
Sbjct 2230  CACATTTGGAGCGAAGGAAAATCATATGAGCAGCTAAAGAACGAGCTGGGAGATGCAACTGCCATTGTGCGAAT  2303

Query 2989  --------------------------------------------------------------------------  2988
                                                                                      
Sbjct 2304  CACCGCTGACATGAAGAACGCAACACTTTACCTGAATCCTAGTGACGGTGAGCCAAAGTACTACCCGGTGGAAG  2377

Query 2989  --------------------------------------------------------------------------  2988
                                                                                      
Sbjct 2378  TTCTGCTGAAAGGTCAGAACCAGGAGCTGCCTGAGGATGTGGACCCCGCCAAAAAGGAGAACTACCTCTCGGAA  2451

Query 2989  --------------------------------------------------------------------------  2988
                                                                                      
Sbjct 2452  CAAGACTTTGTATCTGTGTTTGGCATCACGAGAGGGCAGTTCACTGCTCTGCCTGGCTGGAAACAGCTCCAGCT  2525

Query 2989  ----------------------  2988
                                  
Sbjct 2526  GAAGAAAGAAAGGGGCCTTTTC  2547

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