Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_14534
Subject:
XM_011526557.3
Aligned Length:
3042
Identities:
2776
Gaps:
221

Alignment

Query    1  --------------------------------------ATGC----CGGCCGTGTCCAAGGGCG-ATGGGATGC  31
                                                  .|||    |.|.|.||..|.||.|.| |||||||..
Sbjct    1  ATGGAAACACGAGGGAGGCAAGAAGGCTGGAGGGGAGGCTGCTTCACTGACCTGAGCGAGCGAGCATGGGATCT  74

Query   32  GG-------GGGC----TCGCGGTGTTCATCTCCGACA--TCCGGAACTGTAAGAGCAAAGAGGCGGAAATTAA  92
            ||       ||.|    |.|.||||.|||    .||||  |.|.||| .|||||||||||||||||||||||||
Sbjct   75  GGATGAAGTGGTCATCGTGGAGGTGCTCA----AGACATGTTCTGAA-GGTAAGAGCAAAGAGGCGGAAATTAA  143

Query   93  GAGAATCAACAAGGAACTGGCCAACATCCGCTCCAAGTTCAAAGGAGACAAAGCCTTGGATGGCTACAGTAAGA  166
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  144  GAGAATCAACAAGGAACTGGCCAACATCCGCTCCAAGTTCAAAGGAGACAAAGCCTTGGATGGCTACAGTAAGA  217

Query  167  AAAAATATGTGTGTAAACTGCTTTTCATCTTCCTGCTTGGCCATGACATTGACTTTGGGCACATGGAGGCTGTG  240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  218  AAAAATATGTGTGTAAACTGCTTTTCATCTTCCTGCTTGGCCATGACATTGACTTTGGGCACATGGAGGCTGTG  291

Query  241  AATCTGTTGAGTTCCAATAAATACACAGAGAAGCAAATAGGTTACCTGTTCATTTCTGTGCTGGTGAACTCGAA  314
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  292  AATCTGTTGAGTTCCAATAAATACACAGAGAAGCAAATAGGTTACCTGTTCATTTCTGTGCTGGTGAACTCGAA  365

Query  315  CTCGGAGCTGATCCGCCTCATCAACAACGCCATCAAGAATGACCTGGCCAGCCGCAACCCCACCTTCATGTGCC  388
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  366  CTCGGAGCTGATCCGCCTCATCAACAACGCCATCAAGAATGACCTGGCCAGCCGCAACCCCACCTTCATGTGCC  439

Query  389  TGGCCCTGCACTGCATCGCCAACGTGGGCAGCCGGGAGATGGGCGAGGCCTTTGCCGCTGACATCCCCCGCATC  462
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  440  TGGCCCTGCACTGCATCGCCAACGTGGGCAGCCGGGAGATGGGCGAGGCCTTTGCCGCTGACATCCCCCGCATC  513

Query  463  CTGGTGGCCGGGGACAGCATGGACAGTGTCAAGCAGAGTGCGGCCCTGTGCCTCCTTCGACTGTACAAGGCCTC  536
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  514  CTGGTGGCCGGGGACAGCATGGACAGTGTCAAGCAGAGTGCGGCCCTGTGCCTCCTTCGACTGTACAAGGCCTC  587

Query  537  GCCTGACCTGGTGCCCATGGGCGAGTGGACGGCGCGTGTGGTACACCTGCTCAATGACCAGCACATGGGTGTGG  610
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  588  GCCTGACCTGGTGCCCATGGGCGAGTGGACGGCGCGTGTGGTACACCTGCTCAATGACCAGCACATGGGTGTGG  661

Query  611  TCACGGCCGCCGTCAGCCTCATCACCTGTCTCTGCAAGAAGAACCCAGATGACTTCAAGACGTGCGTCTCTCTG  684
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  662  TCACGGCCGCCGTCAGCCTCATCACCTGTCTCTGCAAGAAGAACCCAGATGACTTCAAGACGTGCGTCTCTCTG  735

Query  685  GCTGTGTCGCGCCTGAGCCGGATCGTCTCCTCTGCCTCCACCGACCTCCAGGACTACACCTACTACTTCGTCCC  758
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  736  GCTGTGTCGCGCCTGAGCCGGATCGTCTCCTCTGCCTCCACCGACCTCCAGGACTACACCTACTACTTCGTCCC  809

Query  759  AGCACCCTGGCTCTCGGTGAAGCTCCTGCGGCTGCTGCAGTGCTACCCGCTTCCAGAGGATGCGGCTGTGAAGG  832
            ||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||
Sbjct  810  AGCACCCTGGCTCTCGGTGAAGCTCCTGCGGCTGCTGCAGTGCTACCCGCCTCCAGAGGATGCGGCTGTGAAGG  883

Query  833  GGCGGCTGGTGGAATGTCTGGAGACTGTGCTCAACAAGGCCCAGGAGCCCCCCAAATCCAAGAAGGTGCAGCAT  906
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  884  GGCGGCTGGTGGAATGTCTGGAGACTGTGCTCAACAAGGCCCAGGAGCCCCCCAAATCCAAGAAGGTGCAGCAT  957

Query  907  TCCAACGCCAAGAACGCCATCCTCTTCGAGACCATCAGCCTCATCATCCACTATGACAGTGAGCCCAACCTCCT  980
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  958  TCCAACGCCAAGAACGCCATCCTCTTCGAGACCATCAGCCTCATCATCCACTATGACAGTGAGCCCAACCTCCT  1031

Query  981  GGTTCGGGCCTGCAACCAGCTGGGCCAGTTCCTGCAGCACCGGGAGACCAACCTGCGCTACCTGGCCCTGGAGA  1054
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1032  GGTTCGGGCCTGCAACCAGCTGGGCCAGTTCCTGCAGCACCGGGAGACCAACCTGCGCTACCTGGCCCTGGAGA  1105

Query 1055  GCATGTGCACGCTGGCCAGCTCCGAGTTCTCCCATGAAGCCGTCAAGACGCACATTGACACCGTCATCAATGCC  1128
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1106  GCATGTGCACGCTGGCCAGCTCCGAGTTCTCCCATGAAGCCGTCAAGACGCACATTGACACCGTCATCAATGCC  1179

Query 1129  CTCAAGACGGAGCGGGACGTCAGCGTGCGGCAGCGGGCGGCTGACCTCCTCTACGCCATGTGTGACCGGAGCAA  1202
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1180  CTCAAGACGGAGCGGGACGTCAGCGTGCGGCAGCGGGCGGCTGACCTCCTCTACGCCATGTGTGACCGGAGCAA  1253

Query 1203  TGCCAAGCAGATCGTGTCGGAGATGCTGCGGTACCTGGAGACGGCAGACTACGCCATCCGCGAGGAGATCGTCC  1276
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1254  TGCCAAGCAGATCGTGTCGGAGATGCTGCGGTACCTGGAGACGGCAGACTACGCCATCCGCGAGGAGATCGTCC  1327

Query 1277  TGAAGGTGGCCATCCTGGCCGAGAAGTACGCCGTGGACTACAGCTGGTACGTGGACACCATCCTCAACCTCATC  1350
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1328  TGAAGGTGGCCATCCTGGCCGAGAAGTACGCCGTGGACTACAGCTGGTACGTGGACACCATCCTCAACCTCATC  1401

Query 1351  CGCATTGCGGGCGACTACGTGAGTGAGGAGGTGTGGTACCGTGTGCTACAGATCGTCACCAACCGTGATGACGT  1424
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1402  CGCATTGCGGGCGACTACGTGAGTGAGGAGGTGTGGTACCGTGTGCTACAGATCGTCACCAACCGTGATGACGT  1475

Query 1425  CCAGGGCTATGCCGCCAAGACCGTCTTTGAGGCGCTCCAGGCCCCTGCCTGTCACGAGAACATGGTGAAGGTTG  1498
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1476  CCAGGGCTATGCCGCCAAGACCGTCTTTGAGGCGCTCCAGGCCCCTGCCTGTCACGAGAACATGGTGAAGGTTG  1549

Query 1499  GCGGCTACATCCTTGGGGAGTTTGGGAACCTGATTGCTGGGGACCCCCGCTCCAGCCCCCCAGTGCAGTTCTCC  1572
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1550  GCGGCTACATCCTTGGGGAGTTTGGGAACCTGATTGCTGGGGACCCCCGCTCCAGCCCCCCAGTGCAGTTCTCC  1623

Query 1573  CTGCTCCACTCCAAGTTCCATCTGTGCAGCGTGGCCACGCGGGCGCTGCTGCTGTCCACCTACATCAAGTTCAT  1646
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1624  CTGCTCCACTCCAAGTTCCATCTGTGCAGCGTGGCCACGCGGGCGCTGCTGCTGTCCACCTACATCAAGTTCAT  1697

Query 1647  CAACCTCTTCCCCGAGACCAAGGCCACCATCCAGNGGNGNTCTGCGGGCCGGCTCCCAGCTGCGCAATGCTGAC  1720
            |||||||||||||||||||||||||||||||||| ||.|..|||||||||||||||||||||||||||||||||
Sbjct 1698  CAACCTCTTCCCCGAGACCAAGGCCACCATCCAG-GGCGTCCTGCGGGCCGGCTCCCAGCTGCGCAATGCTGAC  1770

Query 1721  GTGGAGCTGCAGCAGCGAGCCGTGGAGTACCTCACCCTCAGCTCAGTGGCCAGCACCGACGTCCTGGCCACGGT  1794
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1771  GTGGAGCTGCAGCAGCGAGCCGTGGAGTACCTCACCCTCAGCTCAGTGGCCAGCACCGACGTCCTGGCCACGGT  1844

Query 1795  GCTGGAGGAGATGCCGCCCTTCCCCGAGCGCGAGTCGTCCATCCTGGCCAAGCTGAAACGCAAGAAGGGGCCAG  1868
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1845  GCTGGAGGAGATGCCGCCCTTCCCCGAGCGCGAGTCGTCCATCCTGGCCAAGCTGAAACGCAAGAAGGGGCCAG  1918

Query 1869  GGGCCGGCAGCGCCCTGGACGATGGCCGGAGGGACCCCAGCAGCAACGACATCAACGGGGGCATGGAGCCCACC  1942
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1919  GGGCCGGCAGCGCCCTGGACGATGGCCGGAGGGACCCCAGCAGCAACGACATCAACGGGGGCATGGAGCCCACC  1992

Query 1943  CCCAGCACTGTGTCGACGCCCTCGCCCTCCGCCGACCTCCTGGGGCTGCGGGCAGCCCCTCCCCCGGCAGCACC  2016
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1993  CCCAGCACTGTGTCGACGCCCTCGCCCTCCGCCGACCTCCTGGGGCTGCGGGCAGCCCCTCCCCCGGCAGCACC  2066

Query 2017  CCCGGCTTCTGCAGGAGCAGGGAACCTTCTGGTGGACGTCTTCGATGGCCCGGCCGCCCAGCCCAGCCTGGGGC  2090
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2067  CCCGGCTTCTGCAGGAGCAGGGAACCTTCTGGTGGACGTCTTCGATGGCCCGGCCGCCCAGCCCAGCCTGGGGC  2140

Query 2091  CCACCCCCGAGGAGGCCTTCCTCAGCCCAGGTCCTGAGGACATCGGCCCTCCCATTCCGGAAGCCGATGAGTTG  2164
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2141  CCACCCCCGAGGAGGCCTTCCTCAGCCCAGGTCCTGAGGACATCGGCCCTCCCATTCCGGAAGCCGATGAGTTG  2214

Query 2165  CTGAATAAGTTTGTGTGTAAGAACAACGGGGTCCTGTTCGAGAACCAGCTGCTGCAGATCGGAGTCAAGTCAGA  2238
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2215  CTGAATAAGTTTGTGTGTAAGAACAACGGGGTCCTGTTCGAGAACCAGCTGCTGCAGATCGGAGTCAAGTCAGA  2288

Query 2239  GTTCCGACAGAACCTGGGCCGCATGTATCTCTTCTATGGCAACAAGACCTCGGTGCAGTTCCAGAATTTCTCAC  2312
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2289  GTTCCGACAGAACCTGGGCCGCATGTATCTCTTCTATGGCAACAAGACCTCGGTGCAGTTCCAGAATTTCTCAC  2362

Query 2313  CCACTGTGGTTCACCCGGGAGACCTCCAGACTCAGCTGGCTGTGCAGACCAAGCGCGTGGCGGCGCAGGTGGAC  2386
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2363  CCACTGTGGTTCACCCGGGAGACCTCCAGACTCAGCTGGCTGTGCAGACCAAGCGCGTGGCGGCGCAGGTGGAC  2436

Query 2387  GGCGGCGCGCAGGTGCAGCAGGTGCTCAATATCGAGTGCCTGCGGGACTTCCTGACGCCCCCGCTGCTGTCCGT  2460
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2437  GGCGGCGCGCAGGTGCAGCAGGTGCTCAATATCGAGTGCCTGCGGGACTTCCTGACGCCCCCGCTGCTGTCCGT  2510

Query 2461  GCGCTTCCGGTACGGTGGCGCCCCCCAGGCCCTCACCCTGAAGCTCCCAGTGACCATCAACAAGTTCTTCCAGC  2534
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2511  GCGCTTCCGGTACGGTGGCGCCCCCCAGGCCCTCACCCTGAAGCTCCCAGTGACCATCAACAAGTTCTTCCAGC  2584

Query 2535  CCACCGAGATGGCGGCCCAGGATTTCTTCCAGCGCTGGAAGCAGCTGAGCCTCCCTCAACAGGAGGCGCAGAAA  2608
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2585  CCACCGAGATGGCGGCCCAGGATTTCTTCCAGCGCTGGAAGCAGCTGAGCCTCCCTCAACAGGAGGCGCAGAAA  2658

Query 2609  ATCTTCAAAGCCAACCACCCCATGGACGCAGAAGTTACTAAGGCCAAGCTTCTGGGGTTTGGCTCTGCTCTCCT  2682
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2659  ATCTTCAAAGCCAACCACCCCATGGACGCAGAAGTTACTAAGGCCAAGCTTCTGGGGTTTGGCTCTGCTCTCCT  2732

Query 2683  GGACAATGTGGACCCCAACCCTGGTGACAGAGAAGACACCAGGGTT--TGGGGGATGCCTGGGACTTTCCTCCG  2754
            ||||||||||||||||||||||       |||||         .||  ||||||    |.||||   ||.|||.
Sbjct 2733  GGACAATGTGGACCCCAACCCT-------GAGAA---------CTTCGTGGGGG----CGGGGA---TCATCCA  2783

Query 2755  GCCTTTTGTATTTTTATTTTTGTTCA----TCTGC-----TGCTGTTTACATTCTGGGGGGTTAGGGGGAGTCC  2819
            |.||                     |    .||||     .|||||.|.| |||    ||.|     ||||   
Sbjct 2784  GACT---------------------AAAGCCCTGCAGGTGGGCTGTCTGC-TTC----GGCT-----GGAG---  2823

Query 2820  CCCTCCCTCCCTTTCCCCCCCAA-GCACAGAGGGGAGAGGGGCCAGGGAAGTGGATGT--CTCCT--CCCCTCC  2888
                              ||||| ||.||          ||.|||        |||||  |..||  |||..|.
Sbjct 2824  ------------------CCCAATGCCCA----------GGCCCA--------GATGTACCGGCTGACCCTGCG  2861

Query 2889  CACC--CCACCCTGTTGTAGCCCCTCCTACCCCG-CCCNCATCCAGGGGCTGTGTATTATTG------------  2947
            ||||  |.|       |.|||||.||   .|||| |.|           |||||      ||            
Sbjct 2862  CACCAGCAA-------GGAGCCCGTC---TCCCGTCAC-----------CTGTG------TGAGCTGCTGGCAC  2908

Query 2948  --------  2947
                    
Sbjct 2909  AGCAGTTC  2916

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