Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_14562
- Subject:
- NM_001286809.1
- Aligned Length:
- 1442
- Identities:
- 517
- Gaps:
- 882
Alignment
Query 1 ATGGCCACCATCACCTGCACCCGCTTCACGGAAGAGTACCAGCTCTTCGAGGAATTGGGCAAGGGAGCCTTCTC 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GGTGGTGCGAAGGTGTGTGAAGGTGCTGGCTGGCCAGGAGTATGCTGCCAAGATCATCAACACAAAGAAGCTGT 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 CAGCCAGAGACCATCAGAAGCTGGAGCGTGAAGCCCGCATCTGCCGCCTGCTGAAGCACCCCAACATCGTCCGA 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 CTACATGACAGCATCTCAGAGGAGGGACACCACTACCTGATCTTCGACCTGGTCACTGGTGGGGAACTGTTTGA 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 AGATATCGTGGCCCGGGAGTATTACAGTGAGGCGGATGCCAGTCACTGTATCCAGCAGATCCTGGAGGCTGTGC 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 TGCACTGCCACCAGATGGGGGTGGTGCACCGGGACCTGAAGCCTGAGAATCTGTTGCTGGCCTCCAAGCTCAAG 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 GGTGCCGCAGTGAAGCTGGCAGACTTTGGCCTGGCCATAGAGGTGGAGGGGGAGCAGCAGGCATGGTTTGGGTT 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 TGCAGGGACTCCTGGATATCTCTCCCCAGAAGTGCTGCGGAAGGACCCGTACGGGAAGCCTGTGGACCTGTGGG 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 CTTGTGGGGTCATCCTGTACATCCTGCTGGTTGGGTACCCCCCGTTCTGGGATGAGGACCAGCACCGCCTGTAC 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 CAGCAGATCAAAGCCGGCGCCTTATGATTTCCCATCGCCGGAATGGGACACTGTCACCCCGGAAGCCAAGGATC 740
Sbjct 1 -------------------------------------------------------------------------- 0
Query 741 TGATCAATAAGATGCTGACCATTAACCCATCCAAACGCATCACAGCTGCCGAAGCCATTAAGCACCCCTGGATC 814
|| ||||| ||
Sbjct 1 --------------------------------------AT----GCTGC-----------------------TC 9
Query 815 --TCGCACCGCTCCACCGTGGCATCGTGCATGCACAGACAGGAGACCGTGGACTGCCTGAAGAAGTTCAATGCC 886
||.|| |||| ||| |.||.||| ||||| ||||
Sbjct 10 TTTCTCA-CGCT-----GTG-----------------------GGCCCTGG--TGCCT------------TGCC 40
Query 887 AGGAGGAAACTGAAGGGAGCCATT-CTCACC----ACGATGCTGGCCACCAGGAACTTCTCCGGAGGGAAGAGT 955
.||.| || ||.||| || .|.||..||.||| |.|||||||||||.
Sbjct 41 TGGTG-----------------TTGCTAACCCTCTAC-TTTCTCTCCTCCA---------CAGGAGGGAAGAGC 87
Query 956 GGGGGAAACAAGAAGAGCGATGGTGTGAAGGAATCCTCAGAGAGCACCAACACCACCATCGAGGATGAAGACAC 1029
||.|||||||||||||.||||||||||||||||||.||.||||||||||||||||||||.|||||.||||||||
Sbjct 88 GGAGGAAACAAGAAGAACGATGGTGTGAAGGAATCTTCTGAGAGCACCAACACCACCATTGAGGACGAAGACAC 161
Query 1030 CAAAGTGCGGAAACAGGAAATTATAAAAGTGACAGAGCAGCTGATTGAAGCCATAAGCAATGGAGATTTTGAGT 1103
|||||||||.||||||||||||||.||||||||||||||||||||.||||||||||||||||||||.|||||||
Sbjct 162 CAAAGTGCGCAAACAGGAAATTATCAAAGTGACAGAGCAGCTGATCGAAGCCATAAGCAATGGAGACTTTGAGT 235
Query 1104 CCTACACGAAGATGTGCGACCCTGGCATGACAGCCTTCGAACCTGAGGCCCTGGGGAACCTGGTTGAGGGCCTG 1177
|||||||||||||||||||||||||.|||||||||||.|||||.||||||||||||||||||||.|||||||||
Sbjct 236 CCTACACGAAGATGTGCGACCCTGGAATGACAGCCTTTGAACCAGAGGCCCTGGGGAACCTGGTGGAGGGCCTG 309
Query 1178 GACTTCCATCGATTCTATTTTGAAAACCTGTGGTCCCGGAACAGCAAGCCCGTGCACACCACCATCCTGAATCC 1251
|||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||
Sbjct 310 GACTTTCATCGATTCTATTTTGAAAACCTGTGGTCCCGGAACAGCAAGCCCGTGCACACCACCATCCTGAACCC 383
Query 1252 CCACATCCACCTGATGGGCGACGAGTCAGCCTGCATCGCCTACATCCGCATCACGCAGTACCTGGACGCTGGCG 1325
.|||||||||||||||||.|||||||||||||||||||||||.|||||||||||.|||||||||||.||.||||
Sbjct 384 TCACATCCACCTGATGGGTGACGAGTCAGCCTGCATCGCCTATATCCGCATCACTCAGTACCTGGATGCAGGCG 457
Query 1326 GCATCCCACGCACCGCCCAGTCGGAGGAGACCCGTGTCTGGCACCGCCGGGACGGCAAATGGCAGATCGTCCAC 1399
||||.||.|||||.||||||||.|||||||||||.||||||||||||.||||||||||||||||||||||||||
Sbjct 458 GCATACCCCGCACGGCCCAGTCAGAGGAGACCCGCGTCTGGCACCGCAGGGACGGCAAATGGCAGATCGTCCAC 531
Query 1400 TTCCACAGATCTGGGGCGCCCTCCGTCCTGCCCCAC 1435
||||||||||||||||||||||||||||||||.||.
Sbjct 532 TTCCACAGATCTGGGGCGCCCTCCGTCCTGCCGCAT 567
