Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_14570
- Subject:
- NR_132740.2
- Aligned Length:
- 3037
- Identities:
- 2191
- Gaps:
- 815
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATATCATCATTAGGCGTCAACACAGGAAGTGAGGATACTTCTGGCGAGCGCCGGTTGCTGTTTCTTCTCAGGCT 74
Query 1 ---------------------------------------ATGGGTGATGAAAAGGACTCTTGGAAAGTGAAAAC 35
|||||||||||||||||||||||||||||||||||
Sbjct 75 CAGGGACCGGCCGCGGCCCCGTAGGGTGTTTTAACTCAAATGGGTGATGAAAAGGACTCTTGGAAAGTGAAAAC 148
Query 36 TTTAGATGAAATTCTTCAGGAAAAGAAACGAAGGAAGGAACAAGAGGAGAAAGCAGAGATAAAACGCTTAAAAA 109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TTTAGATGAAATTCTTCAGGAAAAGAAACGAAGGAAGGAACAAGAGGAGAAAGCAGAGATAAAACGCTTAAAAA 222
Query 110 ATTCTGATGACCGGGATTCCAAGCGGGATTCCCTTGAGGAGGGGGAGCTGAGAGATCACCGCATGGAGATCACA 183
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||
Sbjct 223 ATTCTGATGACCGGGATTCCAAGCGGGATTCCCTTGAGGAGGGGGAGCTGAGAGATCACTGCATGGAGATCACA 296
Query 184 ATAAGGAACTCCCCGTATAGAAGAGAAGACTCTATGGAAGACAGAGGAGAAGAAGATGATTCTTTGGCCATCAA 257
||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||
Sbjct 297 ATAAGGAACTCCCCGTATAGAAGAGAAGACTCAATGGAAGACAGAGGAGAAGAAGATGATTCTTTGGCCATCAA 370
Query 258 ACCACCCCAGCAAATGTCTCGGAAAGAAAAAGCTCATCACAGAAAAGATGAAAAGAGAAAAGAGAAACGTAGGC 331
||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||.|||.||||||
Sbjct 371 ACCACCCCAGCAAATGTCTCGGAAAGAAAAAGTTCATCACAGAAAAGATGAAAAGAGAAAAGAAAAATGTAGGC 444
Query 332 ATCGTAGCCATTCAGCAGAAGGGGGGAAGCATGCTAGAGTGAAAGAAAAAGAAAGAGAGCACGAACGTCGGAAA 405
|||.||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 445 ATCATAGCCATTCAGCAGAAGGGGGGAAGCATGCTAGAGTG------AAAGAAAGAGAGCACGAACGTCGGAAA 512
Query 406 CGGCATCGAGAAGAACAGGATAAAGCTCGCCGGGAATGGGAAAGACAGAAGAGAAGGGAGATGGCAAGGGAGCA 479
||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||
Sbjct 513 CGACATCGAGAAGAACAGGATAAAGCTCGCCGGGAATGGGAAAGACAGAAGAGAAGGGAAATGGCAAGGGAGCA 586
Query 480 TTCCAGGAGAGAAAGGGACCGCTTGGAGCAGTTAGAAAGGAAGCGGGAGCGGGAGCGCAAGATGCGGGAGCAGC 553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 587 TTCCAGGAGAGAAAGGGACCGCTTGGAGCAGTTAGAAAGGAAGCGGGAGCGGGAGCGCAAGATGCGGGAGCAGC 660
Query 554 AGAAGGAGCAGCGGGAGCAGAAGGAGCGCGAGCGGCGGGCGGAGGAGCGGCGCAAGGAGCGGGAGGCCCGCAGG 627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 661 AGAAGGAGCAGCGGGAGCAGAAGGAGCGCGAGCGGCGGGCGGAGGAGCGGCGCAAGGAGCGGGAGGCCCGCAGG 734
Query 628 GAAGTGTCTGCACATCACCGAACGATGAGAGAGGACTACAGCGACAAAGTGAAAGCCAGCCACTGGAGTCGCAG 701
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 735 GAAGTGTCTGCACATCACCGAACGATGAGAGAGGACTACAGCGACAAAGTGAAAGCCAGCCACTGGAGTCGCAG 808
Query 702 CCCGCCTCGGCCGCCGCGGGAGCGGTTCGAGTTGGGAGACGGCCGG---------------------------- 747
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 809 CCCGCCTCGGCCGCCGCGGGAGCGGTTCGAGTTGGGAGACGGCCGGAAGCCAGGTGAGGCCAGGCCGGCGCCTG 882
Query 748 ----GAAGCCAG------TAAAAG-AGAGAAAATGGAAGAAAGGGACCTGCTGTCCGACTTACAGGACATCAGC 810
|||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 883 CGCAGAAGCCAGCACAGTTAAAAGAAGAGAAAATGGAAGAAAGGGACCTGCTGTCCGACTTACAGGACATCAGC 956
Query 811 GACAGCGAGAGGAAGACCAGCTCGGCCGAGTCCTCGTCAGCAGAATCAGGCTCAGGTTCTGAGGAAGAAGAGGA 884
|||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||
Sbjct 957 GACAGCGAGAGGAAGACCAGCTCGGCCGAGTCCTCGTCAGCGGAATCAGGCTCAGGTTCTGAGGAAGAAGAGGA 1030
Query 885 GGAGGAGGAAGAGGAGGAGGAGGAAGGGAGCACCAGTGAAGAATCAGAGGAGGAGGAGGAGGAAGAGGAAGAGG 958
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1031 GGAGGAGGAAGAGGAGGAGGAGGAAGGGAGCACCAGTGAAGAATCAGAGGAGGAGGAGGAGGAAGAGGAAGAGG 1104
Query 959 AGGAGGAGGAGACCGGCAGCAACTCTGAGGAGGCATCAGAGCAGTCTGCCGAAGAAGTAAGTGAGGAAGAAATG 1032
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1105 AGGAGGAGGAGACCGGCAGCAACTCTGAGGAGGCATCAGAGCAGTCTGCCGAAGAAGTAAGTGAGGAAGAAATG 1178
Query 1033 AGTGAAGATGAAGAACGAGAAAATGAAAACCACCTCTTGGTTGTTCCAGAGTCACGGTTCGACCGAGATTCCGG 1106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1179 AGTGAAGATGAAGAACGAGAAAATGAAAACCACCTCTTGGTTGTTCCAGAGTCACGGTTCGACCGAGATTCCGG 1252
Query 1107 GGAGAGTGAAGAAGCAGAGGAAGAAGTGGGTGAGGGAACGCCGCAGAGCAGCGCCCTGACAGAGGGCGACTATG 1180
||||||||||||||||||||||||||||
Sbjct 1253 GGAGAGTGAAGAAGCAGAGGAAGAAGTG---------------------------------------------- 1280
Query 1181 TGCCCGACTCCCCTGCCCTGTCGCCCATCGAGCTCAAGCAGGAGCTGCCCAAGTACCTGCCGGCCCTGCAGGGC 1254
||||
Sbjct 1281 ----------------------------------------------------------------------GGGC 1284
Query 1255 TGCCGGAGCGTCGAGGAGTTCCAGTGCCTGAACAGGATCGAGGAGGGCACCTATGGAGTGGTCTACAGAGCAAA 1328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1285 TGCCGGAGCGTCGAGGAGTTCCAGTGCCTGAACAGGATCGAGGAGGGCACCTATGGAGTGGTCTACAGAGCAAA 1358
Query 1329 AGACAAGAAAACAGATGAAATTGTGGCTCTAAAGCGGCTGAAGATGGAGAAGGAGAAGGAGGGCTTCCCGATCA 1402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1359 AGACAAGAAAACAGATGAAATTGTGGCTCTAAAGCGGCTGAAGATGGAGAAGGAGAAGGAGGGCTTCCCGATCA 1432
Query 1403 CGTCGCTGAGGGAGATCAACACCATCCTCAAGGCCCAGCATCCCAACATCGTCACCGTTAGAGAGATTGTGGTG 1476
||||.||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||
Sbjct 1433 CGTCCCTGAGGGAGATCAACACCATCCTCAAGGCCCAGCATCCCAACATTGTCACCGTTAGAGAGATTGTGGTG 1506
Query 1477 GGCAGCAACATGGACAAGATCTACATCGTGATGAACTATGTGGAGCACGACCTCAAGAGCCTGATGGAGACCAG 1550
||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||.
Sbjct 1507 GGCAGCAACATGGACAAGATCTACATCGTGATGAACTACGTGGAGCACGACCTCAAGAGCCTGATGGAGACCAT 1580
Query 1551 AAAACAGCCCCTTCCTGCCAAGGGGAGGTGAAGACCCCTGAGAATCCAGGTTGGTGCGTGGGGGTGAAACACCT 1624
.|||||| ||||||||||| |||||||||||||| ||||||..||||| |.||.|||| |||||||||||||||
Sbjct 1581 GAAACAG-CCCTTCCTGCC-AGGGGAGGTGAAGA-CCCTGATGATCCA-GCTGCTGCG-GGGGGTGAAACACCT 1649
Query 1625 CCACGACAAACT-GATCCCTGCACCGTGACCTCAAGACGTCC-ACCTGGCTGCTGAGCCACGCCGGCATCCTCA 1696
.|||||| |||| ||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||
Sbjct 1650 GCACGAC-AACTGGAT-CCTGCACCGTGACCTCAAGACGTCCAACCT-GCTGCTGAGCCACGCCGGCATCCTCA 1720
Query 1697 AGGTGGGTGACTTCGGGCTGGCGCGGGAGTACGGATCCCCTCTGAAGGCCTACACCCCGGTCGTGGTGACCCTG 1770
||||||||||.||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|
Sbjct 1721 AGGTGGGTGATTTTGGGCTGGCGCGGGAGTACGGATCCCCTCTGAAGGCCTACACCCCGGTCGTGGTGACCCAG 1794
Query 1771 TGGTACCGCGCCCCAGAGCTGCTGCTTGGTGCCAAGGAATACTCCACGGCCGTGGACATGTGGTCAGTGGGTTG 1844
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||
Sbjct 1795 TGGTACCGCGCCCCAGAGCTGCTGCTTGGTGCCAAGGAATACTCCACGGCCGTGGACATGTGGTCAGTGGGCTG 1868
Query 1845 CATCTTCGGGGAGCTGCTGACTCAGAAGCCTCTGTTCCCCGGGAAGTCAGAAATCGATCAGATCAACAAGGTGT 1918
|||||||||||||||||||||||||||||||||||||||||||||.||.||||||||||||||||||||.||||
Sbjct 1869 CATCTTCGGGGAGCTGCTGACTCAGAAGCCTCTGTTCCCCGGGAATTCGGAAATCGATCAGATCAACAAAGTGT 1942
Query 1919 TCAAGGATCTGGGGACCCCTAGTGAGAAAATCTGGCCCGGCTACAGCGAGCTCCCAGCAGTCAAGAAGATGACC 1992
|||||||.|||||||||||.||||||||||||||||||||||||||.||||||||||.||||||.|||||||||
Sbjct 1943 TCAAGGAGCTGGGGACCCCCAGTGAGAAAATCTGGCCCGGCTACAGTGAGCTCCCAGTAGTCAAAAAGATGACC 2016
Query 1993 TTCAGCGAGCACCCCTACAACAACCTCCGCAAGCGCTTCGGGGCTCTGCTCTCAGACCAGGGCTTCGACCTCAT 2066
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2017 TTCAGCGAGCACCCCTACAACAACCTCCGCAAGCGCTTCGGGGCTCTGCTCTCAGACCAGGGCTTCGACCTCAT 2090
Query 2067 GAACAAGTTCCTGACCTACTTCCCCGGGAGGAGGATCAGCGCTGAGGACGGCCTCAAGCATGAGTATTTCCGCG 2140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2091 GAACAAGTTCCTGACCTACTTCCCCGGGAGGAGGATCAGCGCTGAGGACGGCCTCAAGCATGAGTATTTCCGCG 2164
Query 2141 AGACCCCCCTCCCCATCGACCCCTCCATGTTCCCCACGTGGCCCGCCAAGAGCGAGCAGCAGCGTGTGAAGCGG 2214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2165 AGACCCCCCTCCCCATCGACCCCTCCATGTTCCCCACGTGGCCCGCCAAGAGCGAGCAGCAGCGTGTGAAGCGG 2238
Query 2215 GGCACCAGCCCGAGGCCCCCTGAGGGAGGCCTGGGCTACAGCCAGCTGGGTGACGACGACCTGAAGGAGACGGG 2288
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2239 GGCACCAGCCCGAGGCCCCCTGAGGGAGGCCTGGGCTACAGCCAGCTGGGTGACGACGACCTGAAGGAGACGGG 2312
Query 2289 CTTCCACCTTACCACCACGAACCAGGGGGCCTCTGCCGCGGGCCCCGGCTTCAGCCTCAAGTTC---------- 2352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2313 CTTCCACCTTACCACCACGAACCAGGGGGCCTCTGCCGCGGGCCCCGGCTTCAGCCTCAAGTTCTGAAGGTCAG 2386
Query 2353 -------------------------------------------------------------------------- 2352
Sbjct 2387 AGTGGACCCCGTCATGGGGAGAACTCAGCCGGGACCACAGGCGTGGCTACTGCGGCTGGAGCTGCGATGAGACT 2460
Query 2353 -------------------------------------------------------------------------- 2352
Sbjct 2461 CGGAACTCCTCGTCTTACTTTGTGCTCCATGTTTTGTTTTTGTATTTTGGTTTGTAAATTTGTAGAATTAAATC 2534
Query 2353 -------------------------------------------------------------------------- 2352
Sbjct 2535 ATTTTCCTTGTTGTGGAGGAAAGAGCTGTGTTTTCTCCGTGACTTGCCAGGGCATCTTCGGGTGCCCACGTGGG 2608
Query 2353 -------------------------------------------------------------------------- 2352
Sbjct 2609 GCAGCACAAACCTCCACACACCCTCTCCCACTCTCGACACGCACGGGGCTGGCTGGGCCGTGATTTGGAAAGGA 2682
Query 2353 -------------------------------------------------------------------------- 2352
Sbjct 2683 ACTGGTGGGAGCCGGGTGGATTGTTTAATCTTCGGAGCTGGAGACCTGTTTCTGTGTTGGGATGAGCGATGCCC 2756
Query 2353 -------------------------------------------------------------------------- 2352
Sbjct 2757 TCTTGCCCCAACCCACTCGTCCAGACCAGCCCTGTCCACACAGGCCCCCGGCCCCCAACCCCCAGCCCCAGCTG 2830
Query 2353 -------------------------------------------------------------------------- 2352
Sbjct 2831 TGCCAGCAGACTCGACAGGTTTTTATACAAGGTTGTTGAGTTTTAAAATGTATTAAAATATTCTTCGAGGAAAG 2904
Query 2353 --- 2352
Sbjct 2905 CTC 2907