Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_14571
- Subject:
- NM_001313982.2
- Aligned Length:
- 2374
- Identities:
- 839
- Gaps:
- 1527
Alignment
Query 1 ATGGGTGATG-AAAGGACTCTTGGAAAGTGAAAACTTTAGATGAAATTCTTCAGGAAAAGAAACGAAGGAAGGA 73
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGGTGATGAAAAGGACTCTTGGAAAGTGAAAACTTTAGATGAAATTCTTCAGGAAAAGAAACGAAGGAAGGA 74
Query 74 ACAAGAGGAGAAAGCAGAGATAAAACGCTTAAAAAATTCTGATGACCGGGATTCCAAGCGGGATTCCCTTGAGG 147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 ACAAGAGGAGAAAGCAGAGATAAAACGCTTAAAAAATTCTGATGACCGGGATTCCAAGCGGGATTCCCTTGAGG 148
Query 148 AGGGGGAGCTGAGAGATCACCGCATGGAGATCACAATAAGGAACTCCCCGTATAGAAGAGAAGACTCTATGGAA 221
||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||.||||||
Sbjct 149 AGGGGGAGCTGAGAGATCACTGCATGGAGATCACAATAAGGAACTCCCCGTATAGAAGAGAAGACTCAATGGAA 222
Query 222 GACAGAGGAGAAGAAGATGATTCTTTGGCCATCAAACCACCCCAGCAAATGTCTCGGAAAGAAAAAGCTCATCA 295
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||
Sbjct 223 GACAGAGGAGAAGAAGATGATTCTTTGGCCATCAAACCACCCCAGCAAATGTCTCGGAAAGAAAAAGTTCATCA 296
Query 296 CAGAAAAGATGAAAAGAGAAAAGAGAAACGTAGGCATCGTAGCCATTCAGCAGAAGGGGGGAAGCATGCTAGAG 369
||||||||||||||||||||||||.||| .|||||||||||||||
Sbjct 297 CAGAAAAGATGAAAAGAGAAAAGAAAAA------------------------------TGGAAGCATGCTAGAG 340
Query 370 TGAAAGAAAAAGAAAGAGAGCACGAACGTCGGAAACGGCATCGAGAAGAACAGGATAAAGCTCGCCGGGAATGG 443
|| |||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||
Sbjct 341 TG------AAAGAAAGAGAGCACGAACGTCGGAAACGACATCGAGAAGAACAGGATAAAGCTCGCCGGGAATGG 408
Query 444 GAAAGACAGAAGAGAAGGGAGATGGCAAGGGAGCATTCCAGGAGAGAA-------------------------- 491
||||||||||||||||||||.|||||||||||||||||||||||||||
Sbjct 409 GAAAGACAGAAGAGAAGGGAAATGGCAAGGGAGCATTCCAGGAGAGAAAGGGGGAATGATGGCGTGTGCCTCTT 482
Query 492 -AGGGACCGCTTGGAGC--------------------------------------------------------- 507
||||||||||||||||
Sbjct 483 CAGGGACCGCTTGGAGCAGTTAGAAAGGAAGCGGGAGCGGGAGCGCAAGATGCGGGAGCAGCAGAAGGAGCAGC 556
Query 508 -------------------------------------------------------------------------- 507
Sbjct 557 GGGAGCAGAAGGAGCGCGAGCGGCGGGCGGAGGAGCGGCGCAAGGAGCGGGAGGCCCGCAGGGAAGTGTCTGCA 630
Query 508 -------------------------------------------------------------------------- 507
Sbjct 631 CATCACCGAACGATGAGAGAGGACTACAGCGACAAAGTGAAAGCCAGCCACTGGAGTCGCAGCCCGCCTCGGCC 704
Query 508 -------------------------------------------------------------------------- 507
Sbjct 705 GCCGCGGGAGCGGTTCGAGTTGGGAGACGGCCGGAAGCCAGTAAAAGAAGAGAAAATGGAAGAAAGGGACCTGC 778
Query 508 -------------------------------------------------------------------------- 507
Sbjct 779 TGTCCGACTTACAGGACATCAGCGACAGCGAGAGGAAGACCAGCTCGGCCGAGTCCTCGTCAGCGGAATCAGGC 852
Query 508 -------------------------------------------------------------------------- 507
Sbjct 853 TCAGGTTCTGAGGAAGAAGAGGAGGAGGAGGAAGAGGAGGAGGAGGAAGGGAGCACCAGTGAAGAATCAGAGGA 926
Query 508 -------------------------------------------------------------------------- 507
Sbjct 927 GGAGGAGGAGGAAGAGGAAGAGGAGGAGGAGGAGACCGGCAGCAACTCTGAGGAGGCATCAGAGCAGTCTGCCG 1000
Query 508 -------------------------------------------------------------------------- 507
Sbjct 1001 AAGAAGTAAGTGAGGAAGAAATGAGTGAAGATGAAGAACGAGAAAATGAAAACCACCTCTTGGTTGTTCCAGAG 1074
Query 508 -------------------------------------------------------------------------- 507
Sbjct 1075 TCACGGTTCGACCGAGATTCCGGGGAGAGTGAAGAAGCAGAGGAAGAAGTGGGTGAGGGAACGCCGCAGAGCAG 1148
Query 508 -------------------------------------------------------------------------- 507
Sbjct 1149 CGCCCTGACAGAGGGCGACTATGTGCCCGACTCCCCTGCCCTGTTGCCCATCGAGCTCAAGCAGGAGCTGCCCA 1222
Query 508 -------------------------------------------------------------------------- 507
Sbjct 1223 AGTACCTGCCGGCCCTGCAGGGCTGCCGGAGCGTCGAGGAGTTCCAGTGCCTGAACAGGATCGAGGAGGGCACC 1296
Query 508 -------------------------------------------------------------------------- 507
Sbjct 1297 TATGGAGTGGTCTACAGAGCAAAAGACAAGAAAACAGATGAAATTGTGGCTCTAAAGCGGCTGAAGATGGAGAA 1370
Query 508 -------------------------------------------------------------------------- 507
Sbjct 1371 GGAGAAGGAGGGCTTCCCGATCACGTCCCTGAGGGAGATCAACACCATCCTCAAGGCCCAGCATCCCAACATTG 1444
Query 508 -------------------------------------------------------------------------- 507
Sbjct 1445 TCACCGTTAGAGAGATTGTGGTGGGCAGCAACATGGACAAGATCTACATCGTGATGAACTACGTGGAGCACGAC 1518
Query 508 -------------------------------------------------------------------------- 507
Sbjct 1519 CTCAAGAGCCTGATGGAGACCATGAAACAGCCCTTCCTGCCAGGGGAGGTGAAGACCCTGATGATCCAGCTGCT 1592
Query 508 -------------------------------------------------------------------------- 507
Sbjct 1593 GCGGGGGGTGAAACACCTGCACGACAACTGGATCCTGCACCGTGACCTCAAGACGTCCAACCTGCTGCTGAGCC 1666
Query 508 -------------------------------------------------------------------------- 507
Sbjct 1667 ACGCCGGCATCCTCAAGGTGGGTGATTTTGGGCTGGCGCGGGAGTACGGATCCCCTCTGAAGGCCTACACCCCG 1740
Query 508 -------------------------------------------------------------------------- 507
Sbjct 1741 GTCGTGGTGACCCAGTGGTACCGCGCCCCAGAGCTGCTGCTTGGTGCCAAGGAATACTCCACGGCCGTGGACAT 1814
Query 508 -------------------------------------------------------------------------- 507
Sbjct 1815 GTGGTCAGTGGGCTGCATCTTCGGGGAGCTGCTGACTCAGAAGCCTCTGTTCCCCGGGAATTCGGAAATCGATC 1888
Query 508 -------------------------------------------------------------------------A 508
|
Sbjct 1889 AGATCAACAAAGTGTTCAAGGAGCTGGGGACCCCCAGTGAGAAAATCTGGCCCGGCTACAGTGAGCTCCCAGTA 1962
Query 509 GTCAAGAAGATGACCTTCAGCGAGCACCCCTACAACAACCTCCGCAAGCGCTTCGGGGCTCTGCTCTCAGACCA 582
|||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1963 GTCAAAAAGATGACCTTCAGCGAGCACCCCTACAACAACCTCCGCAAGCGCTTCGGGGCTCTGCTCTCAGACCA 2036
Query 583 GGGCTTCGACCTCATGAACAAGTTCCTGACCTACTTCCCCGGGAGGAGGATCAGCGCTGAGGACGGCCTCAAGC 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2037 GGGCTTCGACCTCATGAACAAGTTCCTGACCTACTTCCCCGGGAGGAGGATCAGCGCTGAGGACGGCCTCAAGC 2110
Query 657 ATGAGTATTTCCGCGAGACCCCCCTCCCCATCGACCCCTCCATGTTCCCCACGTGGGCCCGCCAAGAGCGAGCA 730
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 2111 ATGAGTATTTCCGCGAGACCCCCCTCCCCATCGACCCCTCCATGTTCCCCACGT-GGCCCGCCAAGAGCGAGCA 2183
Query 731 GCAGCGTGTGAAGCGGGGCACCAGCCCGAGGCCCCCTGAGGGAGGCCTGGGCTACAGCCAGCTGGGTGACGACG 804
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2184 GCAGCGTGTGAAGCGGGGCACCAGCCCGAGGCCCCCTGAGGGAGGCCTGGGCTACAGCCAGCTGGGTGACGACG 2257
Query 805 ACCTGAAGGAGACGGGCTTCCACCTTACCACCACGAACCAGGGGGCCTCTGCCGCGGGCCCCGGCTTCAGCCTC 878
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2258 ACCTGAAGGAGACGGGCTTCCACCTTACCACCACGAACCAGGGGGCCTCTGCCGCGGGCCCCGGCTTCAGCCTC 2331
Query 879 AAGTTC 884
||||||
Sbjct 2332 AAGTTC 2337
