Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_14571
- Subject:
- NM_024011.4
- Aligned Length:
- 2347
- Identities:
- 868
- Gaps:
- 1470
Alignment
Query 1 ATGGGTGATG-AAAGGACTCTTGGAAAGTGAAAACTTTAGATGAAATTCTTCAGGAAAAGAAACGAAGGAAGGA 73
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGGTGATGAAAAGGACTCTTGGAAAGTGAAAACTTTAGATGAAATTCTTCAGGAAAAGAAACGAAGGAAGGA 74
Query 74 ACAAGAGGAGAAAGCAGAGATAAAACGCTTAAAAAATTCTGATGACCGGGATTCCAAGCGGGATTCCCTTGAGG 147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 ACAAGAGGAGAAAGCAGAGATAAAACGCTTAAAAAATTCTGATGACCGGGATTCCAAGCGGGATTCCCTTGAGG 148
Query 148 AGGGGGAGCTGAGAGATCACCGCATGGAGATCACAATAAGGAACTCCCCGTATAGAAGAGAAGACTCTATGGAA 221
||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||.||||||
Sbjct 149 AGGGGGAGCTGAGAGATCACTGCATGGAGATCACAATAAGGAACTCCCCGTATAGAAGAGAAGACTCAATGGAA 222
Query 222 GACAGAGGAGAAGAAGATGATTCTTTGGCCATCAAACCACCCCAGCAAATGTCTCGGAAAGAAAAAGCTCATCA 295
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||
Sbjct 223 GACAGAGGAGAAGAAGATGATTCTTTGGCCATCAAACCACCCCAGCAAATGTCTCGGAAAGAAAAAGTTCATCA 296
Query 296 CAGAAAAGATGAAAAGAGAAAAGAGAAACGTAGGCATCGTAGCCATTCAGCAGAAGGGGGGAAGCATGCTAGAG 369
||||||||||||||||||||||||.|||.|||||||||.|||||||||||||||||||||||||||||||||||
Sbjct 297 CAGAAAAGATGAAAAGAGAAAAGAAAAATGTAGGCATCATAGCCATTCAGCAGAAGGGGGGAAGCATGCTAGAG 370
Query 370 TGAAAGAAAAAGAAAGAGAGCACGAACGTCGGAAACGGCATCGAGAAGAACAGGATAAAGCTCGCCGGGAATGG 443
|| |||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||
Sbjct 371 TG------AAAGAAAGAGAGCACGAACGTCGGAAACGACATCGAGAAGAACAGGATAAAGCTCGCCGGGAATGG 438
Query 444 GAAAGACAGAAGAGAAGGGAGATGGCAAGGGAGCATTCCAGGAGAGAAAGGGACCGCTTGGAGC---------- 507
||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||
Sbjct 439 GAAAGACAGAAGAGAAGGGAAATGGCAAGGGAGCATTCCAGGAGAGAAAGGGACCGCTTGGAGCAGTTAGAAAG 512
Query 508 -------------------------------------------------------------------------- 507
Sbjct 513 GAAGCGGGAGCGGGAGCGCAAGATGCGGGAGCAGCAGAAGGAGCAGCGGGAGCAGAAGGAGCGCGAGCGGCGGG 586
Query 508 -------------------------------------------------------------------------- 507
Sbjct 587 CGGAGGAGCGGCGCAAGGAGCGGGAGGCCCGCAGGGAAGTGTCTGCACATCACCGAACGATGAGAGAGGACTAC 660
Query 508 -------------------------------------------------------------------------- 507
Sbjct 661 AGCGACAAAGTGAAAGCCAGCCACTGGAGTCGCAGCCCGCCTCGGCCGCCGCGGGAGCGGTTCGAGTTGGGAGA 734
Query 508 -------------------------------------------------------------------------- 507
Sbjct 735 CGGCCGGAAGCCAGTAAAAGAAGAGAAAATGGAAGAAAGGGACCTGCTGTCCGACTTACAGGACATCAGCGACA 808
Query 508 -------------------------------------------------------------------------- 507
Sbjct 809 GCGAGAGGAAGACCAGCTCGGCCGAGTCCTCGTCAGCGGAATCAGGCTCAGGTTCTGAGGAAGAAGAGGAGGAG 882
Query 508 -------------------------------------------------------------------------- 507
Sbjct 883 GAGGAAGAGGAGGAGGAGGAAGGGAGCACCAGTGAAGAATCAGAGGAGGAGGAGGAGGAAGAGGAAGAGGAGGA 956
Query 508 -------------------------------------------------------------------------- 507
Sbjct 957 GGAGGAGACCGGCAGCAACTCTGAGGAGGCATCAGAGCAGTCTGCCGAAGAAGTAAGTGAGGAAGAAATGAGTG 1030
Query 508 -------------------------------------------------------------------------- 507
Sbjct 1031 AAGATGAAGAACGAGAAAATGAAAACCACCTCTTGGTTGTTCCAGAGTCACGGTTCGACCGAGATTCCGGGGAG 1104
Query 508 -------------------------------------------------------------------------- 507
Sbjct 1105 AGTGAAGAAGCAGAGGAAGAAGTGGGTGAGGGAACGCCGCAGAGCAGCGCCCTGACAGAGGGCGACTATGTGCC 1178
Query 508 -------------------------------------------------------------------------- 507
Sbjct 1179 CGACTCCCCTGCCCTGTTGCCCATCGAGCTCAAGCAGGAGCTGCCCAAGTACCTGCCGGCCCTGCAGGGCTGCC 1252
Query 508 -------------------------------------------------------------------------- 507
Sbjct 1253 GGAGCGTCGAGGAGTTCCAGTGCCTGAACAGGATCGAGGAGGGCACCTATGGAGTGGTCTACAGAGCAAAAGAC 1326
Query 508 -------------------------------------------------------------------------- 507
Sbjct 1327 AAGAAAACAGATGAAATTGTGGCTCTAAAGCGGCTGAAGATGGAGAAGGAGAAGGAGGGCTTCCCGATCACGTC 1400
Query 508 -------------------------------------------------------------------------- 507
Sbjct 1401 CCTGAGGGAGATCAACACCATCCTCAAGGCCCAGCATCCCAACATTGTCACCGTTAGAGAGATTGTGGTGGGCA 1474
Query 508 -------------------------------------------------------------------------- 507
Sbjct 1475 GCAACATGGACAAGATCTACATCGTGATGAACTACGTGGAGCACGACCTCAAGAGCCTGATGGAGACCATGAAA 1548
Query 508 -------------------------------------------------------------------------- 507
Sbjct 1549 CAGCCCTTCCTGCCAGGGGAGGTGAAGACCCTGATGATCCAGCTGCTGCGGGGGGTGAAACACCTGCACGACAA 1622
Query 508 -------------------------------------------------------------------------- 507
Sbjct 1623 CTGGATCCTGCACCGTGACCTCAAGACGTCCAACCTGCTGCTGAGCCACGCCGGCATCCTCAAGGTGGGTGATT 1696
Query 508 -------------------------------------------------------------------------- 507
Sbjct 1697 TTGGGCTGGCGCGGGAGTACGGATCCCCTCTGAAGGCCTACACCCCGGTCGTGGTGACCCAGTGGTACCGCGCC 1770
Query 508 -------------------------------------------------------------------------- 507
Sbjct 1771 CCAGAGCTGCTGCTTGGTGCCAAGGAATACTCCACGGCCGTGGACATGTGGTCAGTGGGCTGCATCTTCGGGGA 1844
Query 508 -------------------------------------------------------------------------- 507
Sbjct 1845 GCTGCTGACTCAGAAGCCTCTGTTCCCCGGGAATTCGGAAATCGATCAGATCAACAAAGTGTTCAAGGAGCTGG 1918
Query 508 ----------------------------------------------AGTCAAGAAGATGACCTTCAGCGAGCAC 535
||||||.|||||||||||||||||||||
Sbjct 1919 GGACCCCCAGTGAGAAAATCTGGCCCGGCTACAGTGAGCTCCCAGTAGTCAAAAAGATGACCTTCAGCGAGCAC 1992
Query 536 CCCTACAACAACCTCCGCAAGCGCTTCGGGGCTCTGCTCTCAGACCAGGGCTTCGACCTCATGAACAAGTTCCT 609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1993 CCCTACAACAACCTCCGCAAGCGCTTCGGGGCTCTGCTCTCAGACCAGGGCTTCGACCTCATGAACAAGTTCCT 2066
Query 610 GACCTACTTCCCCGGGAGGAGGATCAGCGCTGAGGACGGCCTCAAGCATGAGTATTTCCGCGAGACCCCCCTCC 683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2067 GACCTACTTCCCCGGGAGGAGGATCAGCGCTGAGGACGGCCTCAAGCATGAGTATTTCCGCGAGACCCCCCTCC 2140
Query 684 CCATCGACCCCTCCATGTTCCCCACGTGGGCCCGCCAAGAGCGAGCAGCAGCGTGTGAAGCGGGGCACCAGCCC 757
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2141 CCATCGACCCCTCCATGTTCCCCACGT-GGCCCGCCAAGAGCGAGCAGCAGCGTGTGAAGCGGGGCACCAGCCC 2213
Query 758 GAGGCCCCCTGAGGGAGGCCTGGGCTACAGCCAGCTGGGTGACGACGACCTGAAGGAGACGGGCTTCCACCTTA 831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2214 GAGGCCCCCTGAGGGAGGCCTGGGCTACAGCCAGCTGGGTGACGACGACCTGAAGGAGACGGGCTTCCACCTTA 2287
Query 832 CCACCACGAACCAGGGGGCCTCTGCCGCGGGCCCCGGCTTCAGCCTCAAGTTC 884
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2288 CCACCACGAACCAGGGGGCCTCTGCCGCGGGCCCCGGCTTCAGCCTCAAGTTC 2340
