Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_14571
- Subject:
- NR_132739.2
- Aligned Length:
- 2875
- Identities:
- 868
- Gaps:
- 1998
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATATCATCATTAGGCGTCAACACAGGAAGTGAGGATACTTCTGGCGAGCGCCGGTTGCTGTTTCTTCTCAGGCT 74
Query 1 ---------------------------------------ATGGGTGATG-AAAGGACTCTTGGAAAGTGAAAAC 34
|||||||||| ||||||||||||||||||||||||
Sbjct 75 CAGGGACCGGCCGCGGCCCCGTAGGGTGTTTTAACTCAAATGGGTGATGAAAAGGACTCTTGGAAAGTGAAAAC 148
Query 35 TTTAGATGAAATTCTTCAGGAAAAGAAACGAAGGAAGGAACAAGAGGAGAAAGCAGAGATAAAACGCTTAAAAA 108
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TTTAGATGAAATTCTTCAGGAAAAGAAACGAAGGAAGGAACAAGAGGAGAAAGCAGAGATAAAACGCTTAAAAA 222
Query 109 ATTCTGATGACCGGGATTCCAAGCGGGATTCCCTTGAGGAGGGGGAGCTGAGAGATCACCGCATGGAGATCACA 182
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||
Sbjct 223 ATTCTGATGACCGGGATTCCAAGCGGGATTCCCTTGAGGAGGGGGAGCTGAGAGATCACTGCATGGAGATCACA 296
Query 183 ATAAGGAACTCCCCGTATAGAAGAGAAGACTCTATGGAAGACAGAGGAGAAGAAGATGATTCTTTGGCCATCAA 256
||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||
Sbjct 297 ATAAGGAACTCCCCGTATAGAAGAGAAGACTCAATGGAAGACAGAGGAGAAGAAGATGATTCTTTGGCCATCAA 370
Query 257 ACCACCCCAGCAAATGTCTCGGAAAGAAAAAGCTCATCACAGAAAAGATGAAAAGAGAAAAGAGAAACGTAGGC 330
||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||.|||.||||||
Sbjct 371 ACCACCCCAGCAAATGTCTCGGAAAGAAAAAGTTCATCACAGAAAAGATGAAAAGAGAAAAGAAAAATGTAGGC 444
Query 331 ATCGTAGCCATTCAGCAGAAGGGGGGAAGCATGCTAGAGTGAAAGAAAAAGAAAGAGAGCACGAACGTCGGAAA 404
|||.||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 445 ATCATAGCCATTCAGCAGAAGGGGGGAAGCATGCTAGAGTG------AAAGAAAGAGAGCACGAACGTCGGAAA 512
Query 405 CGGCATCGAGAAGAACAGGATAAAGCTCGCCGGGAATGGGAAAGACAGAAGAGAAGGGAGATGGCAAGGGAGCA 478
||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||
Sbjct 513 CGACATCGAGAAGAACAGGATAAAGCTCGCCGGGAATGGGAAAGACAGAAGAGAAGGGAAATGGCAAGGGAGCA 586
Query 479 TTCCAGGAGAGAAAGGGACCGCTTGGAGC--------------------------------------------- 507
|||||||||||||||||||||||||||||
Sbjct 587 TTCCAGGAGAGAAAGGGACCGCTTGGAGCAGTTAGAAAGGAAGCGGGAGCGGGAGCGCAAGATGCGGGAGCAGC 660
Query 508 -------------------------------------------------------------------------- 507
Sbjct 661 AGAAGGAGCAGCGGGAGCAGAAGGAGCGCGAGCGGCGGGCGGAGGAGCGGCGCAAGGAGCGGGAGGCCCGCAGG 734
Query 508 -------------------------------------------------------------------------- 507
Sbjct 735 GAAGTGTCTGCACATCACCGAACGATGAGAGAGGACTACAGCGACAAAGTGAAAGCCAGCCACTGGAGTCGCAG 808
Query 508 -------------------------------------------------------------------------- 507
Sbjct 809 CCCGCCTCGGCCGCCGCGGGAGCGGTTCGAGTTGGGAGACGGCCGGAAGCCAGTAAAAGAAGAGAAAATGGAAG 882
Query 508 -------------------------------------------------------------------------- 507
Sbjct 883 AAAGGGACCTGCTGTCCGACTTACAGGACATCAGCGACAGCGAGAGGAAGACCAGCTCGGCCGAGTCCTCGTCA 956
Query 508 -------------------------------------------------------------------------- 507
Sbjct 957 GCGGAATCAGGCTCAGGTTCTGAGGAAGAAGAGGAGGAGGAGGAAGAGGAGGAGGAGGAAGGGAGCACCAGTGA 1030
Query 508 -------------------------------------------------------------------------- 507
Sbjct 1031 AGAATCAGAGGAGGAGGAGGAGGAAGAGGAAGAGGAGGAGGAGGAGACCGGCAGCAACTCTGAGGAGGCATCAG 1104
Query 508 -------------------------------------------------------------------------- 507
Sbjct 1105 AGCAGTCTGCCGAAGAAGTAAGTGAGGAAGAAATGAGTGAAGATGAAGAACGAGAAAATGAAAACCACCTCTTG 1178
Query 508 -------------------------------------------------------------------------- 507
Sbjct 1179 GTTGTTCCAGAGTCACGGTTCGACCGAGATTCCGGGGAGAGTGAAGAAGCAGAGGAAGAAGTGGGGCTGCCGGA 1252
Query 508 -------------------------------------------------------------------------- 507
Sbjct 1253 GCGTCGAGGAGTTCCAGTGCCTGAACAGGATCGAGGAGGGCACCTATGGAGTGGTCTACAGAGCAAAAGACAAG 1326
Query 508 -------------------------------------------------------------------------- 507
Sbjct 1327 AAAACAGATGAAATTGTGGCTCTAAAGCGGCTGAAGATGGAGAAGGAGAAGGAGGGCTTCCCGATCACGTCCCT 1400
Query 508 -------------------------------------------------------------------------- 507
Sbjct 1401 GAGGGAGATCAACACCATCCTCAAGGCCCAGCATCCCAACATTGTCACCGTTAGAGAGATTGTGGTGGGCAGCA 1474
Query 508 -------------------------------------------------------------------------- 507
Sbjct 1475 ACATGGACAAGATCTACATCGTGATGAACTACGTGGAGCACGACCTCAAGAGCCTGATGGAGACCATGAAACAG 1548
Query 508 -------------------------------------------------------------------------- 507
Sbjct 1549 CCCTTCCTGCCAGGGGAGGTGAAGACCCTGATGATCCAGCTGCTGCGGGGGGTGAAACACCTGCACGACAACTG 1622
Query 508 -------------------------------------------------------------------------- 507
Sbjct 1623 GATCCTGCACCGTGACCTCAAGACGTCCAACCTGCTGCTGAGCCACGCCGGCATCCTCAAGGTGGGTGATTTTG 1696
Query 508 -------------------------------------------------------------------------- 507
Sbjct 1697 GGCTGGCGCGGGAGTACGGATCCCCTCTGAAGGCCTACACCCCGGTCGTGGTGACCCAGTGGTACCGCGCCCCA 1770
Query 508 -------------------------------------------------------------------------- 507
Sbjct 1771 GAGCTGCTGCTTGGTGCCAAGGAATACTCCACGGCCGTGGACATGTGGTCAGTGGGCTGCATCTTCGGGGAGCT 1844
Query 508 -------------------------------------------------------------------------- 507
Sbjct 1845 GCTGACTCAGAAGCCTCTGTTCCCCGGGAATTCGGAAATCGATCAGATCAACAAAGTGTTCAAGGAGCTGGGGA 1918
Query 508 -------------------------------------------AGTCAAGAAGATGACCTTCAGCGAGCACCCC 538
||||||.||||||||||||||||||||||||
Sbjct 1919 CCCCCAGTGAGAAAATCTGGCCCGGCTACAGTGAGCTCCCAGTAGTCAAAAAGATGACCTTCAGCGAGCACCCC 1992
Query 539 TACAACAACCTCCGCAAGCGCTTCGGGGCTCTGCTCTCAGACCAGGGCTTCGACCTCATGAACAAGTTCCTGAC 612
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1993 TACAACAACCTCCGCAAGCGCTTCGGGGCTCTGCTCTCAGACCAGGGCTTCGACCTCATGAACAAGTTCCTGAC 2066
Query 613 CTACTTCCCCGGGAGGAGGATCAGCGCTGAGGACGGCCTCAAGCATGAGTATTTCCGCGAGACCCCCCTCCCCA 686
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2067 CTACTTCCCCGGGAGGAGGATCAGCGCTGAGGACGGCCTCAAGCATGAGTATTTCCGCGAGACCCCCCTCCCCA 2140
Query 687 TCGACCCCTCCATGTTCCCCACGTGGGCCCGCCAAGAGCGAGCAGCAGCGTGTGAAGCGGGGCACCAGCCCGAG 760
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2141 TCGACCCCTCCATGTTCCCCACGT-GGCCCGCCAAGAGCGAGCAGCAGCGTGTGAAGCGGGGCACCAGCCCGAG 2213
Query 761 GCCCCCTGAGGGAGGCCTGGGCTACAGCCAGCTGGGTGACGACGACCTGAAGGAGACGGGCTTCCACCTTACCA 834
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2214 GCCCCCTGAGGGAGGCCTGGGCTACAGCCAGCTGGGTGACGACGACCTGAAGGAGACGGGCTTCCACCTTACCA 2287
Query 835 CCACGAACCAGGGGGCCTCTGCCGCGGGCCCCGGCTTCAGCCTCAAGTTC------------------------ 884
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2288 CCACGAACCAGGGGGCCTCTGCCGCGGGCCCCGGCTTCAGCCTCAAGTTCTGAAGGTCAGAGTGGACCCCGTCA 2361
Query 885 -------------------------------------------------------------------------- 884
Sbjct 2362 TGGGGAGAACTCAGCCGGGACCACAGGCGTGGCTACTGCGGCTGGAGCTGCGATGAGACTCGGAACTCCTCGTC 2435
Query 885 -------------------------------------------------------------------------- 884
Sbjct 2436 TTACTTTGTGCTCCATGTTTTGTTTTTGTATTTTGGTTTGTAAATTTGTAGAATTAAATCATTTTCCTTGTTGT 2509
Query 885 -------------------------------------------------------------------------- 884
Sbjct 2510 GGAGGAAAGAGCTGTGTTTTCTCCGTGACTTGCCAGGGCATCTTCGGGTGCCCACGTGGGGCAGCACAAACCTC 2583
Query 885 -------------------------------------------------------------------------- 884
Sbjct 2584 CACACACCCTCTCCCACTCTCGACACGCACGGGGCTGGCTGGGCCGTGATTTGGAAAGGAACTGGTGGGAGCCG 2657
Query 885 -------------------------------------------------------------------------- 884
Sbjct 2658 GGTGGATTGTTTAATCTTCGGAGCTGGAGACCTGTTTCTGTGTTGGGATGAGCGATGCCCTCTTGCCCCAACCC 2731
Query 885 -------------------------------------------------------------------------- 884
Sbjct 2732 ACTCGTCCAGACCAGCCCTGTCCACACAGGCCCCCGGCCCCCAACCCCCAGCCCCAGCTGTGCCAGCAGACTCG 2805
Query 885 --------------------------------------------------------------- 884
Sbjct 2806 ACAGGTTTTTATACAAGGTTGTTGAGTTTTAAAATGTATTAAAATATTCTTCGAGGAAAGCTC 2868
