Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_14571
- Subject:
- NR_132740.2
- Aligned Length:
- 2914
- Identities:
- 868
- Gaps:
- 2037
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATATCATCATTAGGCGTCAACACAGGAAGTGAGGATACTTCTGGCGAGCGCCGGTTGCTGTTTCTTCTCAGGCT 74
Query 1 ---------------------------------------ATGGGTGATG-AAAGGACTCTTGGAAAGTGAAAAC 34
|||||||||| ||||||||||||||||||||||||
Sbjct 75 CAGGGACCGGCCGCGGCCCCGTAGGGTGTTTTAACTCAAATGGGTGATGAAAAGGACTCTTGGAAAGTGAAAAC 148
Query 35 TTTAGATGAAATTCTTCAGGAAAAGAAACGAAGGAAGGAACAAGAGGAGAAAGCAGAGATAAAACGCTTAAAAA 108
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TTTAGATGAAATTCTTCAGGAAAAGAAACGAAGGAAGGAACAAGAGGAGAAAGCAGAGATAAAACGCTTAAAAA 222
Query 109 ATTCTGATGACCGGGATTCCAAGCGGGATTCCCTTGAGGAGGGGGAGCTGAGAGATCACCGCATGGAGATCACA 182
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||
Sbjct 223 ATTCTGATGACCGGGATTCCAAGCGGGATTCCCTTGAGGAGGGGGAGCTGAGAGATCACTGCATGGAGATCACA 296
Query 183 ATAAGGAACTCCCCGTATAGAAGAGAAGACTCTATGGAAGACAGAGGAGAAGAAGATGATTCTTTGGCCATCAA 256
||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||
Sbjct 297 ATAAGGAACTCCCCGTATAGAAGAGAAGACTCAATGGAAGACAGAGGAGAAGAAGATGATTCTTTGGCCATCAA 370
Query 257 ACCACCCCAGCAAATGTCTCGGAAAGAAAAAGCTCATCACAGAAAAGATGAAAAGAGAAAAGAGAAACGTAGGC 330
||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||.|||.||||||
Sbjct 371 ACCACCCCAGCAAATGTCTCGGAAAGAAAAAGTTCATCACAGAAAAGATGAAAAGAGAAAAGAAAAATGTAGGC 444
Query 331 ATCGTAGCCATTCAGCAGAAGGGGGGAAGCATGCTAGAGTGAAAGAAAAAGAAAGAGAGCACGAACGTCGGAAA 404
|||.||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 445 ATCATAGCCATTCAGCAGAAGGGGGGAAGCATGCTAGAGTG------AAAGAAAGAGAGCACGAACGTCGGAAA 512
Query 405 CGGCATCGAGAAGAACAGGATAAAGCTCGCCGGGAATGGGAAAGACAGAAGAGAAGGGAGATGGCAAGGGAGCA 478
||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||
Sbjct 513 CGACATCGAGAAGAACAGGATAAAGCTCGCCGGGAATGGGAAAGACAGAAGAGAAGGGAAATGGCAAGGGAGCA 586
Query 479 TTCCAGGAGAGAAAGGGACCGCTTGGAGC--------------------------------------------- 507
|||||||||||||||||||||||||||||
Sbjct 587 TTCCAGGAGAGAAAGGGACCGCTTGGAGCAGTTAGAAAGGAAGCGGGAGCGGGAGCGCAAGATGCGGGAGCAGC 660
Query 508 -------------------------------------------------------------------------- 507
Sbjct 661 AGAAGGAGCAGCGGGAGCAGAAGGAGCGCGAGCGGCGGGCGGAGGAGCGGCGCAAGGAGCGGGAGGCCCGCAGG 734
Query 508 -------------------------------------------------------------------------- 507
Sbjct 735 GAAGTGTCTGCACATCACCGAACGATGAGAGAGGACTACAGCGACAAAGTGAAAGCCAGCCACTGGAGTCGCAG 808
Query 508 -------------------------------------------------------------------------- 507
Sbjct 809 CCCGCCTCGGCCGCCGCGGGAGCGGTTCGAGTTGGGAGACGGCCGGAAGCCAGGTGAGGCCAGGCCGGCGCCTG 882
Query 508 -------------------------------------------------------------------------- 507
Sbjct 883 CGCAGAAGCCAGCACAGTTAAAAGAAGAGAAAATGGAAGAAAGGGACCTGCTGTCCGACTTACAGGACATCAGC 956
Query 508 -------------------------------------------------------------------------- 507
Sbjct 957 GACAGCGAGAGGAAGACCAGCTCGGCCGAGTCCTCGTCAGCGGAATCAGGCTCAGGTTCTGAGGAAGAAGAGGA 1030
Query 508 -------------------------------------------------------------------------- 507
Sbjct 1031 GGAGGAGGAAGAGGAGGAGGAGGAAGGGAGCACCAGTGAAGAATCAGAGGAGGAGGAGGAGGAAGAGGAAGAGG 1104
Query 508 -------------------------------------------------------------------------- 507
Sbjct 1105 AGGAGGAGGAGACCGGCAGCAACTCTGAGGAGGCATCAGAGCAGTCTGCCGAAGAAGTAAGTGAGGAAGAAATG 1178
Query 508 -------------------------------------------------------------------------- 507
Sbjct 1179 AGTGAAGATGAAGAACGAGAAAATGAAAACCACCTCTTGGTTGTTCCAGAGTCACGGTTCGACCGAGATTCCGG 1252
Query 508 -------------------------------------------------------------------------- 507
Sbjct 1253 GGAGAGTGAAGAAGCAGAGGAAGAAGTGGGGCTGCCGGAGCGTCGAGGAGTTCCAGTGCCTGAACAGGATCGAG 1326
Query 508 -------------------------------------------------------------------------- 507
Sbjct 1327 GAGGGCACCTATGGAGTGGTCTACAGAGCAAAAGACAAGAAAACAGATGAAATTGTGGCTCTAAAGCGGCTGAA 1400
Query 508 -------------------------------------------------------------------------- 507
Sbjct 1401 GATGGAGAAGGAGAAGGAGGGCTTCCCGATCACGTCCCTGAGGGAGATCAACACCATCCTCAAGGCCCAGCATC 1474
Query 508 -------------------------------------------------------------------------- 507
Sbjct 1475 CCAACATTGTCACCGTTAGAGAGATTGTGGTGGGCAGCAACATGGACAAGATCTACATCGTGATGAACTACGTG 1548
Query 508 -------------------------------------------------------------------------- 507
Sbjct 1549 GAGCACGACCTCAAGAGCCTGATGGAGACCATGAAACAGCCCTTCCTGCCAGGGGAGGTGAAGACCCTGATGAT 1622
Query 508 -------------------------------------------------------------------------- 507
Sbjct 1623 CCAGCTGCTGCGGGGGGTGAAACACCTGCACGACAACTGGATCCTGCACCGTGACCTCAAGACGTCCAACCTGC 1696
Query 508 -------------------------------------------------------------------------- 507
Sbjct 1697 TGCTGAGCCACGCCGGCATCCTCAAGGTGGGTGATTTTGGGCTGGCGCGGGAGTACGGATCCCCTCTGAAGGCC 1770
Query 508 -------------------------------------------------------------------------- 507
Sbjct 1771 TACACCCCGGTCGTGGTGACCCAGTGGTACCGCGCCCCAGAGCTGCTGCTTGGTGCCAAGGAATACTCCACGGC 1844
Query 508 -------------------------------------------------------------------------- 507
Sbjct 1845 CGTGGACATGTGGTCAGTGGGCTGCATCTTCGGGGAGCTGCTGACTCAGAAGCCTCTGTTCCCCGGGAATTCGG 1918
Query 508 -------------------------------------------------------------------------- 507
Sbjct 1919 AAATCGATCAGATCAACAAAGTGTTCAAGGAGCTGGGGACCCCCAGTGAGAAAATCTGGCCCGGCTACAGTGAG 1992
Query 508 --------AGTCAAGAAGATGACCTTCAGCGAGCACCCCTACAACAACCTCCGCAAGCGCTTCGGGGCTCTGCT 573
||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1993 CTCCCAGTAGTCAAAAAGATGACCTTCAGCGAGCACCCCTACAACAACCTCCGCAAGCGCTTCGGGGCTCTGCT 2066
Query 574 CTCAGACCAGGGCTTCGACCTCATGAACAAGTTCCTGACCTACTTCCCCGGGAGGAGGATCAGCGCTGAGGACG 647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2067 CTCAGACCAGGGCTTCGACCTCATGAACAAGTTCCTGACCTACTTCCCCGGGAGGAGGATCAGCGCTGAGGACG 2140
Query 648 GCCTCAAGCATGAGTATTTCCGCGAGACCCCCCTCCCCATCGACCCCTCCATGTTCCCCACGTGGGCCCGCCAA 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 2141 GCCTCAAGCATGAGTATTTCCGCGAGACCCCCCTCCCCATCGACCCCTCCATGTTCCCCACGT-GGCCCGCCAA 2213
Query 722 GAGCGAGCAGCAGCGTGTGAAGCGGGGCACCAGCCCGAGGCCCCCTGAGGGAGGCCTGGGCTACAGCCAGCTGG 795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2214 GAGCGAGCAGCAGCGTGTGAAGCGGGGCACCAGCCCGAGGCCCCCTGAGGGAGGCCTGGGCTACAGCCAGCTGG 2287
Query 796 GTGACGACGACCTGAAGGAGACGGGCTTCCACCTTACCACCACGAACCAGGGGGCCTCTGCCGCGGGCCCCGGC 869
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2288 GTGACGACGACCTGAAGGAGACGGGCTTCCACCTTACCACCACGAACCAGGGGGCCTCTGCCGCGGGCCCCGGC 2361
Query 870 TTCAGCCTCAAGTTC----------------------------------------------------------- 884
|||||||||||||||
Sbjct 2362 TTCAGCCTCAAGTTCTGAAGGTCAGAGTGGACCCCGTCATGGGGAGAACTCAGCCGGGACCACAGGCGTGGCTA 2435
Query 885 -------------------------------------------------------------------------- 884
Sbjct 2436 CTGCGGCTGGAGCTGCGATGAGACTCGGAACTCCTCGTCTTACTTTGTGCTCCATGTTTTGTTTTTGTATTTTG 2509
Query 885 -------------------------------------------------------------------------- 884
Sbjct 2510 GTTTGTAAATTTGTAGAATTAAATCATTTTCCTTGTTGTGGAGGAAAGAGCTGTGTTTTCTCCGTGACTTGCCA 2583
Query 885 -------------------------------------------------------------------------- 884
Sbjct 2584 GGGCATCTTCGGGTGCCCACGTGGGGCAGCACAAACCTCCACACACCCTCTCCCACTCTCGACACGCACGGGGC 2657
Query 885 -------------------------------------------------------------------------- 884
Sbjct 2658 TGGCTGGGCCGTGATTTGGAAAGGAACTGGTGGGAGCCGGGTGGATTGTTTAATCTTCGGAGCTGGAGACCTGT 2731
Query 885 -------------------------------------------------------------------------- 884
Sbjct 2732 TTCTGTGTTGGGATGAGCGATGCCCTCTTGCCCCAACCCACTCGTCCAGACCAGCCCTGTCCACACAGGCCCCC 2805
Query 885 -------------------------------------------------------------------------- 884
Sbjct 2806 GGCCCCCAACCCCCAGCCCCAGCTGTGCCAGCAGACTCGACAGGTTTTTATACAAGGTTGTTGAGTTTTAAAAT 2879
Query 885 ---------------------------- 884
Sbjct 2880 GTATTAAAATATTCTTCGAGGAAAGCTC 2907
