Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_14621
Subject:
XM_011246094.2
Aligned Length:
2313
Identities:
2100
Gaps:
65

Alignment

Query    1  ATGCATACAGGAGGAGAGACTTCAGCATGCAAACCTTCATCTGTTCGGCTTGCACCGTCATTTTCATTCCATGC  74
            ||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||.||.|||||||||||
Sbjct    1  ATGCATACAGGAGGAGAGACTTCAGCATGCAAACCTTCATCTGTCCGGCTTGCACCGTCGTTCTCATTCCATGC  74

Query   75  TGCTGGCCTTCAGATGGCTGGACAGATGCCCCATTCACATCAGTACAGTGACCGTCGCCAGCCAAACATAAGTG  148
            ||||||||||||||||||||.||||||||||||.|||||.|||||||||||||||||||||||.|.||||||||
Sbjct   75  TGCTGGCCTTCAGATGGCTGCACAGATGCCCCACTCACACCAGTACAGTGACCGTCGCCAGCCGAGCATAAGTG  148

Query  149  ACCAACAGGTTTCTGCCTTATCATATTCTGACCAGATTCAGCAACCTCTAACTAAC------------------  204
            ||||.|||||.|||||||||.|||||||||||||||||||||||||||||||||||                  
Sbjct  149  ACCAGCAGGTGTCTGCCTTACCATATTCTGACCAGATTCAGCAACCTCTAACTAACCAGGTGATGCCTGACATT  222

Query  205  ---------CAGAGGCGGATGCCCCAAACCTTCCGTGACCCAGCAACTGCTCCCCTGAGAAAACTTTCTGTTGA  269
                     |||||||||||||||||||||||||||||.||||||||||||||.|||||||||||.|||||.||
Sbjct  223  GTCATGTTACAGAGGCGGATGCCCCAAACCTTCCGTGATCCAGCAACTGCTCCTCTGAGAAAACTCTCTGTGGA  296

Query  270  CTTGATCAAAACATACAAGCATATTAATGAGGTTTACTATGCAAAAAAGAAGCGAAGACACCAACAGGGCCAGG  343
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  CTTGATCAAAACATACAAGCATATTAATGAGGTTTACTATGCAAAAAAGAAGCGAAGACACCAACAGGGCCAGG  370

Query  344  GAGACGATTCTAGTCATAAGAAGGAACGGAAGGTTTACAATGATGGTTATGATGATGATAACTATGATTATATT  417
            |.||||||||.||||||||||||||.|||||||||||||||||||||||.||||||||||||||||||||||||
Sbjct  371  GGGACGATTCCAGTCATAAGAAGGAGCGGAAGGTTTACAATGATGGTTACGATGATGATAACTATGATTATATT  444

Query  418  GTAAAAAACGGAGAAAAGTGGATGGATCGTTACGAAATTGACTCCTTGATAGGCAAAGGTTCCTTTGGACAGGT  491
            |||||||||||.|||||||||||||||||.||.|||||.||||||||.||||||||||||||.|||||||||||
Sbjct  445  GTAAAAAACGGGGAAAAGTGGATGGATCGGTATGAAATCGACTCCTTAATAGGCAAAGGTTCATTTGGACAGGT  518

Query  492  TGTAAAGGCATATGATCGTGTGGAGCAAGAATGGGTTGCCATTAAAATAATAAAGAACAAGAAAGCTTTTCTGA  565
            |||.||.||.|||||..|.|||||||||||||||||.|||||||||||.||.||||||||||||||.|||||||
Sbjct  519  TGTGAAAGCTTATGACAGAGTGGAGCAAGAATGGGTCGCCATTAAAATCATCAAGAACAAGAAAGCGTTTCTGA  592

Query  566  ATCAAGCACAGATAGAAGTGCGACTTCTTGAGCTCATGAACAAACATGACACTGAAATGAAATACTACATAGTG  639
            |||||||.||||||||||||||.||.||||||||||||||||||||.||||||||||||||.||||||||||||
Sbjct  593  ATCAAGCCCAGATAGAAGTGCGGCTGCTTGAGCTCATGAACAAACACGACACTGAAATGAAGTACTACATAGTG  666

Query  640  CATTTGAAACGCCACTTTATGTTTCGAAACCATCTCTGTTTAGTTTTTGAAATGCTGTCCTACAACCTCTATGA  713
            ||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||.||.||||||||
Sbjct  667  CATTTGAAACGCCACTTTATGTTTCGAAACCATCTCTGTTTAGTGTTTGAAATGCTGTCCTATAATCTCTATGA  740

Query  714  CTTGCTGAGAAAACACCAATTTCCGAGGGGTCTCTTTGAACCTAACACGAAAGTTTGCGCAACAGATGTGCACT  787
            .|||.|||| |||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||.
Sbjct  741  TTTGTTGAG-AAACACCAACTTCCGAGGGGTCTCTTTGAACCTAACACGAAAGTTTGCGCAACAGATGTGCACA  813

Query  788  GCACTGCTTTTCCTTGCGACTCCAGAACTTAGTATCATTCACTGTGATCTAAAACCTGAAAATATCCTTCTTTG  861
            |||.|||||||.|||||||||||||||||||||||||||||||||||..||||.|||||.||.||||||||.||
Sbjct  814  GCATTGCTTTTTCTTGCGACTCCAGAACTTAGTATCATTCACTGTGACTTAAAGCCTGAGAACATCCTTCTGTG  887

Query  862  TAACCCCAAACGCAGTGCAATCAAGATAGTTGACTTTGGCAGTTCTTGTCAGTTGGGGCAGAGGATATACCAGT  935
            ||||||||||||.||||||||||||||.|||||.||||||||.|||||||||||||||||||||||||||||||
Sbjct  888  TAACCCCAAACGGAGTGCAATCAAGATTGTTGATTTTGGCAGCTCTTGTCAGTTGGGGCAGAGGATATACCAGT  961

Query  936  ATATTCAGAGTCGCTTTTATCGGTCTCCAGAGGTGCTACTGGGAATGCCTTATGACCTTGCCATTGATATGTGG  1009
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||.||.||||||
Sbjct  962  ATATTCAGAGTCGCTTTTATCGGTCTCCAGAGGTGCTACTGGGAATGCCTTATGACCTTGCTATCGACATGTGG  1035

Query 1010  TCCCTCGGGTGTATTTTGGTTGAAATGCACACTGGAGAACCTCTGTTCAGTGGTGCCAATGAGGTAGATCAGAT  1083
            |||||.||.|||||.|||||||||||||||||||||||.||||||||||||||||||||||||||.||||||||
Sbjct 1036  TCCCTTGGATGTATCTTGGTTGAAATGCACACTGGAGAGCCTCTGTTCAGTGGTGCCAATGAGGTCGATCAGAT  1109

Query 1084  GAATAAAATAGTGGAAGTTCTGGGTATTCCACCTGCTCATATTCTTGACCAAGCACCAAAAGCAAGAAAGTTCT  1157
            ||||||||||||||||||..||||.||.|||||||||||||||||||||||||||||.||||||||||||||||
Sbjct 1110  GAATAAAATAGTGGAAGTCTTGGGCATCCCACCTGCTCATATTCTTGACCAAGCACCGAAAGCAAGAAAGTTCT  1183

Query 1158  TTGAGAAGTTGCCAGATGGCACTTGGAACTTAAAGAAGACCAAAGATGGAAAACGGGAGTACAAACCACCAGGA  1231
            |||||||||||||.|||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1184  TTGAGAAGTTGCCCGATGGCACTTGGAGCTTAAAGAAGACCAAAGATGGAAAACGGGAGTACAAACCACCAGGA  1257

Query 1232  ACCCGTAAACTTCATAACATTCTTGGAGTGGAAACAGGAGGACCTGGTGGGCGACGTGCTGGGGAGTCAGGTCA  1305
            |||||||||||||||||.|||||||||||.|||||||||||||||||.|||||.|||||||||||.||.|||||
Sbjct 1258  ACCCGTAAACTTCATAATATTCTTGGAGTAGAAACAGGAGGACCTGGCGGGCGGCGTGCTGGGGAATCGGGTCA  1331

Query 1306  TACGGTCGCTGACTACTTGAAGTTCAAAGACCTCATTTTAAGGATGCTTGATTATGACCCCAAAACTCGAATTC  1379
            |||.||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||
Sbjct 1332  TACTGTAGCTGACTACTTGAAGTTCAAAGACCTCATTTTAAGGATGCTTGATTATGACCCCAAAACTCGGATTC  1405

Query 1380  AACCTTATTATGCTCTGCAGCACAGTTTCTTCAAGAAAACAGCTGATGAAGGTACAAATACAAGTAATAGTGTA  1453
            |||||||||||||.||||||||||||||.||||||||||||||||||||||||||.||.||||||||.|||||.
Sbjct 1406  AACCTTATTATGCCCTGCAGCACAGTTTTTTCAAGAAAACAGCTGATGAAGGTACCAACACAAGTAACAGTGTG  1479

Query 1454  TCTACAAGCCCCGCCATGGAGCAGTCTCAGTCTTCGGGCACCACCTCCAGTACATCGTCAAGCTTCATGATCAC  1527
            |||||.|||||.||.||||||||||||||||||||.||||||||||||||.||.||.||.|||           
Sbjct 1480  TCTACCAGCCCTGCGATGGAGCAGTCTCAGTCTTCAGGCACCACCTCCAGCACCTCCTCCAGC-----------  1542

Query 1528  TCATCAGGTG-----TCAAGA-----CATCAGTTGGAGGAGCACGGTCGGATCAGGACGCACCAGCATCGGCAC  1591
               |||||||     ||..||     .|.||||.||| ||||..||||||||| .|||||||||||||||.|||
Sbjct 1543  ---TCAGGTGGATCCTCGGGAACGAGTAACAGTGGGA-GAGCCAGGTCGGATC-CGACGCACCAGCATCGACAC  1611

Query 1592  ATTGGCGGGCATTATCTTCAACTGCTG-TGT-CATGTCATGGACTGCGAGACACACAGTCCGGCAGGTGCGTCA  1663
            |..||.||.||    |||| .|||||| ||| ||.|.|||||||||.|||||||||||||| .||||||||.||
Sbjct 1612  AGCGGTGGACA----CTTC-GCTGCTGCTGTCCAGGCCATGGACTGTGAGACACACAGTCC-CCAGGTGCGCCA  1679

Query 1664  GCAATTTCCTGCTCGTCTTGG-TGGATCAGGCACTGAAGCTCCTACACAGGTCAGTGATGAAACTCATCCT-CT  1735
            |||.|||||.||||.|||.|| ||| |||||||||||||||||||||||.||||.||.||||||||||||| .|
Sbjct 1680  GCAGTTTCCGGCTCCTCTGGGATGG-TCAGGCACTGAAGCTCCTACACAAGTCACTGTTGAAACTCATCCTGTT  1752

Query 1736  CAAGAAACAACCATTCATGTAGCCCCTCAACAGAATGCATCAAATCATCACCATGGTAACAGTTCCCATCACCA  1809
            |||||.||||||.|||||||||||||.||.|||||.||||...|||||||||||||.|||||||||||||||||
Sbjct 1753  CAAGAGACAACCTTTCATGTAGCCCCCCAGCAGAACGCATTGCATCATCACCATGGAAACAGTTCCCATCACCA  1826

Query 1810  TCACCACCACCACCACCATCACCACCACCATGGACAACAAGCCTTGGGTAACCGGACCAGGCCAAGGGTCTACA  1883
            .|||||||||||.|||||.|||||||||||||||||.|||||||||||||||||||||||||||||||||||||
Sbjct 1827  CCACCACCACCATCACCACCACCACCACCATGGACAGCAAGCCTTGGGTAACCGGACCAGGCCAAGGGTCTACA  1900

Query 1884  ATTCTCCAACGAATAGCTCCTCTACCCAAGATTCTATGGAGGTTGGCCACAGTCACCACTCCATGACATCCCTG  1957
            ||||||||||.|||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1901  ATTCTCCAACAAATAGCTCCTCTACCCAGGATTCTATGGAGGTTGGCCACAGTCACCACTCCATGACATCCCTG  1974

Query 1958  TCTTCCTCAACGACTTCTTCCTCGACATCTTCCTCCTCTACTGGTAACCAAGGCAATCAGGCCTACCAGAATCG  2031
            |||||||||||.|||||||||||||||||||||||||||||||||||.|||||||||||||||||.|||||.||
Sbjct 1975  TCTTCCTCAACAACTTCTTCCTCGACATCTTCCTCCTCTACTGGTAATCAAGGCAATCAGGCCTATCAGAACCG  2048

Query 2032  CCCAGTGGCTGCTAATACCTTGGACTTTGGACAGAATGGAGCTATGGACGTTAATTTGACCGTCTACTCCAATC  2105
            |||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2049  CCCAGTGGCTGCTAACACCTTGGACTTTGGACAGAATGGAGCTATGGACGTTAATTTGACCGTCTACTCCAATC  2122

Query 2106  CCCGCCAAGAGACTGGCATAGCTGGACATCCAACATACCAATTTTCTGCTAATACAGGTCCTGCACATTACATG  2179
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2123  CCCGCCAAGAGACTGGCATAGCTGGACATCCAACATACCAATTTTCTGCTAATACAGGTCCTGCACATTACATG  2196

Query 2180  ACTGAAGGACATCTGACAATGAGGCAAGGGGCTGATAGAGAAGAGTCCCCCATGACAGGAGTTTGTGTGCAACA  2253
            |||||||||||||||.|.|||||.|||||||||||||||||||||||.||||||||||||||||||||||||||
Sbjct 2197  ACTGAAGGACATCTGGCGATGAGACAAGGGGCTGATAGAGAAGAGTCTCCCATGACAGGAGTTTGTGTGCAACA  2270

Query 2254  GAGTCCTGTAGCTAGCTCG  2272
            |||||||||||||||||||
Sbjct 2271  GAGTCCTGTAGCTAGCTCG  2289

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