Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_14689
- Subject:
- NR_131247.1
- Aligned Length:
- 3739
- Identities:
- 1632
- Gaps:
- 1865
Alignment
Query 1 ATGAGGTTGACGCTACTTTGTTGCACCTGGAGGGAAGAACGTATGGGAGAGGAAG--GAAGCGAGTTG---CCC 69
||.| |.|||| ||||| .|.||.|| | |||
Sbjct 1 -----------------------------------AGTA-GGATGG----GGAAGCTTAGGCCAG--GCCACCC 32
Query 70 GTGTG----TGCA-------AG---CTGCGGCCAGAGGATCT----ATGATG--GCCAGTACCTCCAGGCCCTG 123
.||.| |.|| || ||.|||.||||| || |.|||| ||||| ||| .|||||||
Sbjct 33 ATGGGCTCCTCCAGACCTCCAGAGTCTCCGGACAGAG---CTGCAGAGGATGCAGCCAG--CCT--TGGCCCTG 99
Query 124 AACGCGGACTGGCACGCAGACT-------------GCTTCAGGTGTTGTGACTGCAGTGCCTCCCTGTCGCACC 184
| ||..|.|.|||.|.|| ||| |.|||.||.||.||.||.|.||||||.||.||||
Sbjct 100 A-----GAAGGACCCGCTGCCTCCACCTCCGTGGGGCT--AAGTGCTGCGAGTGTAGCGTCTCCCTTTCACACC 166
Query 185 AGTACTATGAGAAGGATGGGCAGCTCTTCTGCAAGAAGGACTACTGGGCCCGCTATGGCGAGTCCTGCCATGGG 258
|||||||.|||||||||||.||||||||||||||||||||||||||||||||||||||||||||.|||||.|||
Sbjct 167 AGTACTACGAGAAGGATGGACAGCTCTTCTGCAAGAAGGACTACTGGGCCCGCTATGGCGAGTCTTGCCACGGG 240
Query 259 TGCTCTGAGCAAATCACCAAGGGACTGGTTATGGTGGCTGGGGAGCTGAAGTACCACCCCGAGTGTTTCATCTG 332
|||||.|||||.||||||||.||.|||||.|||||||||||||||||||||||||||||.||||||||||||||
Sbjct 241 TGCTCCGAGCACATCACCAAAGGGCTGGTCATGGTGGCTGGGGAGCTGAAGTACCACCCTGAGTGTTTCATCTG 314
Query 333 CCTCACGTGTGGGACCTTTATCGGTGACGGGGACACCTACACGCTGGTGGAGCACTCCAAGCTGTACTGCGGGC 406
||||.|.|||||.|.|||.||.||.||.||||||||||||||.||||||||||||||||||||||||||.||.|
Sbjct 315 CCTCGCCTGTGGAAACTTCATTGGCGATGGGGACACCTACACACTGGTGGAGCACTCCAAGCTGTACTGTGGCC 388
Query 407 ACTGCTACTACCAGACTGTGGTGACCCCCGTCATCGAGCAGATCCTGCCTGACTCCCCTGGCTCCCACCTGCCC 480
|.||||||||||||||.|||||.||.||.||||||||.||||||||.||||||||.||.|||||||||||||||
Sbjct 389 AGTGCTACTACCAGACCGTGGTAACTCCAGTCATCGAACAGATCCTACCTGACTCACCCGGCTCCCACCTGCCC 462
Query 481 CACACCGTCACCCTGGTGTCCATCCCAGCCTCATCTCATGGCAAGCGTGGACTTTCAGTCTCCATTGACCCCCC 554
|||||.||||||||.|||||.|||||||||||..|.||||||||.||.||.||.||.||||||||.||||||||
Sbjct 463 CACACAGTCACCCTCGTGTCTATCCCAGCCTCTGCCCATGGCAAACGAGGCCTGTCTGTCTCCATCGACCCCCC 536
Query 555 GCACGGCCCACCGGGCTGTGGCACCGAGCACTCACACACCGTCCGCGTCCAGGGAGTGGATCCCGGGCTGCATG 628
.|||||||||||.||.||||||||.|||||.||.|||||.|||||.|||||.|||||||| |||.|||||||||
Sbjct 537 TCACGGCCCACCAGGATGTGGCACGGAGCATTCGCACACTGTCCGAGTCCAAGGAGTGGA-CCCAGGCTGCATG 609
Query 629 AGCCCAGATGTGAAGAATTCCATCCACGTCGGAGACCGGATCTTGGAAATCAATGGCACGCCCATCCGAAATGT 702
|||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||.|||||
Sbjct 610 AGCCCAGATGTGAAGAATTCCATCCACGTTGGAGACCGGATCTTGGAAATCAATGGCACGCCCATCCGGAATGT 683
Query 703 GCCCCTGGACGAGATTGACCTGCTGATTCAGGAAACCAGCCGCCTGCTCCAGCTGACCCTCGAGCATGACCCTC 776
|||.|||||||||||.|||.|||||||.|||||.||||||||||||||||||||||||||||||||.|||||.|
Sbjct 684 GCCGCTGGACGAGATCGACTTGCTGATCCAGGAGACCAGCCGCCTGCTCCAGCTGACCCTCGAGCACGACCCCC 757
Query 777 ACGATACACTGGGCCACGGGCTGGGGCCTGAGACCAGCCCCCTGAGCTCTCCGGCTTATACTCCCAGCGGGGAG 850
|.||..||||||||||.||||..|.|.|.||..||||||||||||||||.||||...|.|||||||||||..||
Sbjct 758 ATGACTCACTGGGCCATGGGCCCGTGTCGGATCCCAGCCCCCTGAGCTCCCCGGTGCACACTCCCAGCGGACAG 831
Query 851 GCGGGCAGCTCTGCCCGGCAGAAACCTGTCTTGAGGAGCTGCAGCATCGACAGGTCTCCGGGCGCTGGCTCACT 924
||.|.|||||||||||||||||||||||||||||||||||||||.||.||||.|||.|||||..|..|||||||
Sbjct 832 GCAGCCAGCTCTGCCCGGCAGAAACCTGTCTTGAGGAGCTGCAGTATTGACACGTCCCCGGGTACCAGCTCACT 905
Query 925 GGGCTCCCCGGCCTCCCAGCGCAAGGACCTGGGTCGCTCTGAGTCCCTCCGCGTAGTCTGCCGGCCACACCGCA 998
.|.|||.||.|||||||||||||||||||||||||||||.||.||||||||.||.||||||||.||||||||.|
Sbjct 906 AGCCTCTCCAGCCTCCCAGCGCAAGGACCTGGGTCGCTCCGAATCCCTCCGAGTGGTCTGCCGACCACACCGAA 979
Query 999 TCTTCCGGCCGTCGGACCTCATCCACGGGGAGGTGCTGGGCAAGGGCTGCTTCGGCCAGGCTATCAAGGTGACA 1072
||||||||||.||.||.||||||||.|||||.|||||||||||||||||.||.||||||||.||||||||||||
Sbjct 980 TCTTCCGGCCATCTGATCTCATCCATGGGGAAGTGCTGGGCAAGGGCTGTTTTGGCCAGGCCATCAAGGTGACA 1053
Query 1073 CACCGTGAGACAGGTGAGGTGATGGTGATGAAGGAGCTGATCCGGTTCGACGAGGAGACCCAGAGGACGTTCCT 1146
|||||.||.|||||.||||||||||||||||||||.||.||||||||.||.|||||||||||||||||.|||||
Sbjct 1054 CACCGAGAAACAGGCGAGGTGATGGTGATGAAGGAACTTATCCGGTTTGATGAGGAGACCCAGAGGACATTCCT 1127
Query 1147 CAAGGAGGTGAAGGTCATGCGATGCCTGGAACACCCCAACGTGCTCAAGTTCATCGGGGTGCTCTAC-AGGACA 1219
|||||||||.|||||||||||.||||||||.|||||.||||||||||||||||||||.||||||||| ||||||
Sbjct 1128 CAAGGAGGTAAAGGTCATGCGCTGCCTGGAGCACCCTAACGTGCTCAAGTTCATCGGAGTGCTCTACAAGGACA 1201
Query 1220 GA---GCTCA--CTCATCACTGAGTACATCAAAGGGCGGCACGCTCCGGGGCATCATCAAGAGCATGGACAGCC 1288
| |||.| .|||||||.||||||||| |||||||||||.||.||||||||||||||||.||| |||
Sbjct 1202 -AGCGGCTAAACTTCATCACAGAGTACATC-AAGGGCGGCACCCTGCGGGGCATCATCAAGAACAT-----GCC 1268
Query 1289 AGTACCCATGGAGCCAGAGAGTGAGCTTTGCCAAGGACATCGCATCAGGGATGGCCTACCTCCACTCCATGAAC 1362
|||||||.|||||.|||||.||.|||||||||||||||||.|||||||||||||||||||||||.||.||||||
Sbjct 1269 AGTACCCGTGGAGTCAGAGGGTCAGCTTTGCCAAGGACATTGCATCAGGGATGGCCTACCTCCATTCGATGAAC 1342
Query 1363 ATCATCCACCGAGACCTCAACTCCCACAACTGCCTGGTCCGCGAG----------------------------- 1407
||||||||||||||||||||||||||||||||.||||||||.|||
Sbjct 1343 ATCATCCACCGAGACCTCAACTCCCACAACTGTCTGGTCCGTGAGGTGAGCAGTGGGGCCCAGCAGCACTGGGC 1416
Query 1408 -------------------------------------------------------------------------- 1407
Sbjct 1417 AGCCAGCTGTGCTGAAGGAAGAAGGGACCTAGGAGCTGCTCCTTTCAGGGCTTCCACTAGAGGTCAGGTGAAAA 1490
Query 1408 -------------------------------------------------------------------------- 1407
Sbjct 1491 GTACCAAGGCAGACCAGGTTAGCCCTGGCTCTGCCGTTTATACCATGGCAGCAATCCTCAGACCAGCAGTGCAA 1564
Query 1408 -------------------------------------------------------------------------- 1407
Sbjct 1565 GGGTTTAACAGGTCAGAGAAGAGAAGACTGATTCAAAATGAAAAGCCCCACCTTTACTGCAGCCTTCACAGACA 1638
Query 1408 -----------------------------------AACAA---------------------------------- 1412
|||||
Sbjct 1639 CCACCTGAGGTAGCCCAGGCTACCCAGGCAGCAGCAACAACTGCAACAGTGTGTGGGCAGGGGCATCTGGGCAG 1712
Query 1413 -------------------------------------------------------------------------- 1412
Sbjct 1713 ACTTCTTGAATTGGAGACTTGGCAGAGGCATGTCCGTGGAGGCCAAGAGGATAAGAGGCAATCAGCCCCAAGTT 1786
Query 1413 -------------------------------------------------------------------------- 1412
Sbjct 1787 TACAGGTCCCTAGTGTCCTCTAAGCCCTATCAGTCTGCCGAGGACACTGCACAGAAGATGGTACTATCTGCTGG 1860
Query 1413 -------------------------------------------------------------------------- 1412
Sbjct 1861 GGCTGCCCAGCAAGATAGAGAAACCAGGCTGTGGAACATCCTGAGGGTGACCCACAAAACTCGGAGCATTTGGT 1934
Query 1413 --------------GAATGTGGTGGTGGCTGACTTCGGGCTGGCGCGTCTCATGGTGGACGAGAAGACTCAGCC 1472
|||.|||||||||||.|||||.||||||||.||.||||||.|.||.||.||||.||||.|
Sbjct 1935 GGCATGAAAAATAGGAACGTGGTGGTGGCCGACTTTGGGCTGGCTCGACTCATGATCGATGAAAAGAATCAGTC 2008
Query 1473 TGAGGGCCTGCGGAGCCTCAAGAAGCCAGACCGCAAGAAGCGCTACACCGTGGTGGGCAACCCCTACTGGATGG 1546
|||.|.|.|.||.|||||.||||||||.||||||||||||||.|||||.|||||||||||||||||||||||||
Sbjct 2009 TGAAGACTTACGCAGCCTTAAGAAGCCGGACCGCAAGAAGCGGTACACAGTGGTGGGCAACCCCTACTGGATGG 2082
Query 1547 CACCTGAGATGATCAACGGCCGCAGCTATGATGAGAAGGTGGATGTGTTCTCCTTTGGGATCGTCCTGTGCGAG 1620
|.||.|||||||||||.||.||.||.||||||||.||||||||.|||||.||||||||.||.|||||.||.|||
Sbjct 2083 CGCCAGAGATGATCAATGGTCGTAGTTATGATGAAAAGGTGGACGTGTTTTCCTTTGGAATTGTCCTCTGTGAG 2156
Query 1621 ATCATCGGGCGGGTGAACGCAGACCCTGACTACCTGCCCCGCACCATGGACTTTGGCCTCAACGTGCGAGGATT 1694
||.||||||||.|||||.||||||||||||||.|||||||||||.|||||||||||||||||.||..|.||.||
Sbjct 2157 ATTATCGGGCGTGTGAATGCAGACCCTGACTATCTGCCCCGCACTATGGACTTTGGCCTCAATGTAAGGGGTTT 2230
Query 1695 CCTGGACCGCTACTGCCCCCCAAACTGCCCCCCGAGCTTCTTCCCCATCACCGTGCGCTGTTGCGATCTGGACC 1768
|||||||||||||||.||.||||||||.|||||.||.||||||||||||||.||||||||.||.||.|||||.|
Sbjct 2231 CCTGGACCGCTACTGTCCACCAAACTGTCCCCCAAGTTTCTTCCCCATCACTGTGCGCTGCTGTGACCTGGATC 2304
Query 1769 CCGAGAAGAGGCCATCCTTTGTGAAGCTGGAACACTGGCTGGAGACCCTCCGCATGCACCTGGCCGGCCACCTG 1842
|.||.|||||.||.||.|||||.|||||||||||.|||||.||.||.||.|||||||||.||.|.||.||||||
Sbjct 2305 CTGAAAAGAGACCCTCTTTTGTAAAGCTGGAACAATGGCTAGAAACACTTCGCATGCACTTGTCTGGTCACCTG 2378
Query 1843 CCACTGGGCCCACAGCTGGAGCAGCTGGACAGAGGTTTCTGGGAGACCTACCGGCGCGGCGAGAGCGGACTGCC 1916
||||||||||||||.|||||.||.|||||..|.||.||||||||||||||||||||.|||||||||..||||||
Sbjct 2379 CCACTGGGCCCACAACTGGAACAACTGGAGCGGGGCTTCTGGGAGACCTACCGGCGGGGCGAGAGCTCACTGCC 2452
Query 1917 TGCCCACCCTGAGGTCCCCGAC---------------------------------------------------- 1938
|||||||||.||||||||.|||
Sbjct 2453 TGCCCACCCCGAGGTCCCTGACTGAGCTCAGCGGGCCCCACCATCTGCATCCCTACCTTTGGAGACGATACCCT 2526
Query 1939 -------------------------------------------------------------------------- 1938
Sbjct 2527 CACCAGATTTCTCAGCAGGGGTGGCCTAGGCCTGGAGCCCTCAGCCAGGGCCGTGGTGCCCACACCCATCCCCC 2600
Query 1939 -------------------------------------------------------------------------- 1938
Sbjct 2601 AGACCCAGGCCCTGACCTGCCTTTTCCCCTCATGCAGGGTGCCCCCCAGCCTCTCTCTGCCTCTGGCCCCCAAG 2674
Query 1939 -------------------------------------------------------------------------- 1938
Sbjct 2675 TCACCAGGCTGCACACACACGTGGTCGGTCACATTGCCCTGCCTTACCTCCCAGGGGCCAACCCCTCACTGGTC 2748
Query 1939 -------------------------------------------------------------------------- 1938
Sbjct 2749 TTGCATGAGCTAGAGGGTTGGGAAGCTGGGCTCATTCCACGCATTGCCTGCAGCCATCTGCACACTGCACCTGC 2822
Query 1939 -------------------------------------------------------------------------- 1938
Sbjct 2823 TGGCAGCTCCTCCCCAGCAAGGCTGGGCTAGAAGGCAGCTTTAGAAGTGAGCCCCTCTAATGCCAAGGGAGCGG 2896
Query 1939 -------------------------------------------------------------------------- 1938
Sbjct 2897 CTCTGTGCCCAGGAACCCAAGGGGAGGCTAGGATCCCCTTGGGGAAATCCAGGTAGCATCAGGTATTGACAGGG 2970
Query 1939 -------------------------------------------------------------------------- 1938
Sbjct 2971 ATCTGAATCCCAAAGCAGAGAGAGAGGTCCAACCCCGTGTGGCCAGGCAGTGGCCCCTCACTCTTGCTTAGTGT 3044
Query 1939 -------------------------------------------------------------------------- 1938
Sbjct 3045 CCATCTCATTTCTTGATCAAAGCCACTTTAGTGAGAAATAGGTACCAGTCCTCAGGACGAGCCAGGATCCCTCA 3118
Query 1939 -------------------------------------------------------------------------- 1938
Sbjct 3119 GGGGAGAGGGCAGACGATGCCTGGGATCCAGCTGACAGGAGGGTCCAGCCCGCACTACAGAGGCTGGGCAGAGG 3192
Query 1939 -------------------------------------------------------------------------- 1938
Sbjct 3193 GAAGGAGGCAGCCACCCACCAGCACCCCAGCCCTCCAGGGTCATCTCAGCACCCAGGCCTCTCCCCATGGCTGG 3266
Query 1939 -------------------------------------------------------------------------- 1938
Sbjct 3267 GGCAGCCCCGCCCCCTCCCTGGGTGCATCTGCCCTCTGAGTTCTTTCTGTGTGATCTATTTTTTAAGAAGAGTT 3340
Query 1939 -------------------------------------------------------------------------- 1938
Sbjct 3341 TGTATTATTTTTTCATAACGGCTGCAGCAGCAGCTGCTGGGGGTTTAGGGGGATGGTTTTGTTTTGTTGTTTTG 3414
Query 1939 -------------------------------------------------------------------------- 1938
Sbjct 3415 TTTTGGTTTAGGTGGGTGGGGGTGGGAGGGCCATGTCTTCACTCCGCTTCAGTTGACCATCTAGGGCATATTAA 3488
Query 1939 -------------------------------------------------------------------------- 1938
Sbjct 3489 ACTGTGAAGCTTTCCCAGTGCACTTTGAATATGGAAGAGAATTTGAGCAGACCCCCGCGGGACCAAGACTGAAA 3562
Query 1939 -------------------------------------------------------------------------- 1938
Sbjct 3563 GAGGCAAGGTCTCCTTGCCTCGGCCCAGTGATCATGACAGGAATGAACCCAAACTCAGAACAATAAAATCAATT 3636
Query 1939 --------------------------------------- 1938
Sbjct 3637 CTGTGCTCCCCACGCGGGGCTTGCAAAAAAAAAAAAAAA 3675
