Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_14689
- Subject:
- XM_006504396.3
- Aligned Length:
- 1961
- Identities:
- 1419
- Gaps:
- 358
Alignment
Query 1 ATGAGGTTGACGCTACTTTGTTGCACCTGGAGGGAAGAACGTATGGGAGAGGAAGGAAGCGAGTTGCCCGTGTG 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||
Sbjct 1 ATGAGGTTGACGCTACTTTGTTGCACCTGGAGGGAAGAACGTATGGGAGAGGAAGGAAGCGAGTTGCCTGTGTG 74
Query 75 TGCAAGCTGCGGCCAGAGGATCTATGATGGCCAGTACCTCCAGGCCCTGAACGCGGACTGGCACGCAGACTGCT 148
|||.|||||.|||||||||||||||||.|||||||||||||||||||||||.||.||||||||.||||||||||
Sbjct 75 TGCGAGCTGTGGCCAGAGGATCTATGACGGCCAGTACCTCCAGGCCCTGAATGCTGACTGGCATGCAGACTGCT 148
Query 149 TCAGGTGTTGTGACTGCAGTGCCTCCCTGTCGCACCAGTACTATGAGAAGGATGGGCAGCTCTTCTGCAAGAAG 222
|||||||.||.||.||.||.|.||||||.||.|||||||||||.|||||||||||.||||||||||||||||||
Sbjct 149 TCAGGTGCTGCGAGTGTAGCGTCTCCCTTTCACACCAGTACTACGAGAAGGATGGACAGCTCTTCTGCAAGAAG 222
Query 223 GACTACTGGGCCCGCTATGGCGAGTCCTGCCATGGGTGCTCTGAGCAAATCACCAAGGGACTGGTTATGGTGGC 296
||||||||||||||||||||||||||.|||||.||||||||.|||||.||||||||.||.|||||.||||||||
Sbjct 223 GACTACTGGGCCCGCTATGGCGAGTCTTGCCACGGGTGCTCCGAGCACATCACCAAAGGGCTGGTCATGGTGGC 296
Query 297 TGGGGAGCTGAAGTACCACCCCGAGTGTTTCATCTGCCTCACGTGTGGGACCTTTATCGGTGACGGGGACACCT 370
|||||||||||||||||||||.||||||||||||||||||.|.|||||.|.|||.||.||.||.||||||||||
Sbjct 297 TGGGGAGCTGAAGTACCACCCTGAGTGTTTCATCTGCCTCGCCTGTGGAAACTTCATTGGCGATGGGGACACCT 370
Query 371 ACACGCTGGTGGAGCACTCCAAGCTGTACTGCGGGCACTGCTACTACCAGACTGTGGTGACCCCCGTCATCGAG 444
||||.||||||||||||||||||||||||||.||.||.||||||||||||||.|||||.||.||.||||||||.
Sbjct 371 ACACACTGGTGGAGCACTCCAAGCTGTACTGTGGCCAGTGCTACTACCAGACCGTGGTAACTCCAGTCATCGAA 444
Query 445 CAGATCCTGCCTGACTCCCCTGGCTCCCACCTGCCCCACACCGTCACCCTGGTGTCCATCCCAGCCTCATCTCA 518
||||||||.||||||||.||.||||||||||||||||||||.||||||||.|||||.|||||||||||..|.||
Sbjct 445 CAGATCCTACCTGACTCACCCGGCTCCCACCTGCCCCACACAGTCACCCTCGTGTCTATCCCAGCCTCTGCCCA 518
Query 519 TGGCAAGCGTGGACTTTCAGTCTCCATTGACCCCCCGCACGGCCCACCGGGCTGTGGCACCGAGCACTCACACA 592
||||||.||.||.||.||.||||||||.||||||||.|||||||||||.||.||||||||.|||||.||.||||
Sbjct 519 TGGCAAACGAGGCCTGTCTGTCTCCATCGACCCCCCTCACGGCCCACCAGGATGTGGCACGGAGCATTCGCACA 592
Query 593 CCGTCCGCGTCCAGGGAGTGGATCCCGGGCTGCATGAGCCCAGATGTGAAGAATTCCATCCACGTCGGAGACCG 666
|.|||||.|||||.|||||||| |||.||||||||||||||||||||||||||||||||||||||.||||||||
Sbjct 593 CTGTCCGAGTCCAAGGAGTGGA-CCCAGGCTGCATGAGCCCAGATGTGAAGAATTCCATCCACGTTGGAGACCG 665
Query 667 GATCTTGGAAATCAATGGCACGCCCATCCGAAATGTGCCCCTGGACGAGATTGACCTGCTGATTCAGGAAACCA 740
||||||||||||||||||||||||||||||.||||||||.|||||||||||.|||.|||||||.|||||.||||
Sbjct 666 GATCTTGGAAATCAATGGCACGCCCATCCGGAATGTGCCGCTGGACGAGATCGACTTGCTGATCCAGGAGACCA 739
Query 741 GCCGCCTGCTCCAGCTGACCCTCGAGCATGACCCTCACGATACACTGGGCCACGGGCTGGGGCCTGAGACCAGC 814
||||||||||||||||||||||||||||.|||||.||.||..||||||||||.||||..|.|.|.||..|||||
Sbjct 740 GCCGCCTGCTCCAGCTGACCCTCGAGCACGACCCCCATGACTCACTGGGCCATGGGCCCGTGTCGGATCCCAGC 813
Query 815 CCCCTGAGCTCTCCGGCTTATACTCCCAGCGGGGAGGCGGGCAGCTCTGCCCGGCAGAAACCTGTCTTGAGGAG 888
|||||||||||.||||...|.|||||||||||..||||.|.|||||||||||||||||||||||||||||||||
Sbjct 814 CCCCTGAGCTCCCCGGTGCACACTCCCAGCGGACAGGCAGCCAGCTCTGCCCGGCAGAAACCTGTCTTGAGGAG 887
Query 889 CTGCAGCATCGACAGGTCTCCGGGCGCTGGCTCACTGGGCTCCCCGGCCTCCCAGCGCAAGGACCTGGGTCGCT 962
||||||.||.||||.|||.|||||..|..|||||||.|.|||.||.||||||||||||||||||||||||||||
Sbjct 888 CTGCAGTATTGACACGTCCCCGGGTACCAGCTCACTAGCCTCTCCAGCCTCCCAGCGCAAGGACCTGGGTCGCT 961
Query 963 CTGAGTCCCTCCGCGTAGTCTGCCGGCCACACCGCATCTTCCGGCCGTCGGACCTCATCCACGGGGAGGTGCTG 1036
|.||.||||||||.||.||||||||.||||||||.|||||||||||.||.||.||||||||.|||||.||||||
Sbjct 962 CCGAATCCCTCCGAGTGGTCTGCCGACCACACCGAATCTTCCGGCCATCTGATCTCATCCATGGGGAAGTGCTG 1035
Query 1037 GGCAAGGGCTGCTTCGGCCAGGCTATCAAGGTGACACACCGTGAGACAGGTGAGGTGATGGTGATGAAGGAGCT 1110
|||||||||||.||.||||||||.|||||||||||||||||.||.|||||.||||||||||||||||||||.||
Sbjct 1036 GGCAAGGGCTGTTTTGGCCAGGCCATCAAGGTGACACACCGAGAAACAGGCGAGGTGATGGTGATGAAGGAACT 1109
Query 1111 GATCCGGTTCGACGAGGAGACCCAGAGGACGTTCCTCAAGGAGGTGAAGGTCATGCGATGCCTGGAACACCCCA 1184
.||||||||.||.|||||||||||||||||.||||||||||||||.|||||||||||.||||||||.|||||.|
Sbjct 1110 TATCCGGTTTGATGAGGAGACCCAGAGGACATTCCTCAAGGAGGTAAAGGTCATGCGCTGCCTGGAGCACCCTA 1183
Query 1185 ACGTGCTCAAGTTCATCGGGGTGCTCTAC-AGGACAGA---GCTCA--CTCATCACTGAGTACATCAAAGGGCG 1252
|||||||||||||||||||.||||||||| |||||| | |||.| .|||||||.||||||||| |||||||
Sbjct 1184 ACGTGCTCAAGTTCATCGGAGTGCTCTACAAGGACA-AGCGGCTAAACTTCATCACAGAGTACATC-AAGGGCG 1255
Query 1253 GCACGCTCCGGGGCATCATCAAGAGCATGGACAGCCAGTACCCATGGAGCCAGAGAGTGAGCTTTGCCAAGGAC 1326
||||.||.||||||||||||||||.||||||||||||||||||.|||||.|||||.||.|||||||||||||||
Sbjct 1256 GCACCCTGCGGGGCATCATCAAGAACATGGACAGCCAGTACCCGTGGAGTCAGAGGGTCAGCTTTGCCAAGGAC 1329
Query 1327 ATCGCATCAGGGATGGCCTACCTCCACTCCATGAACATCATCCACCGAGACCTCAACTCCCACAACTGCCTGGT 1400
||.|||||||||||||||||||||||.||.||||||||||||||||||||||||||||||||||||||.|||||
Sbjct 1330 ATTGCATCAGGGATGGCCTACCTCCATTCGATGAACATCATCCACCGAGACCTCAACTCCCACAACTGTCTGGT 1403
Query 1401 CCGCGAGAACAAGAATGTGGTGGTGGCTGACTTCGGGCTGGCGCGTCTCATGGTGGACGAGAAGACTCAGCCTG 1474
|||.|| |.|||| || ||||.|..||||
Sbjct 1404 CCGTGA----------------------GCCTTC----------------------AC----AGACACCACCTG 1429
Query 1475 AGG--GCCTGCGGAGCCTCAAGAAGCCAG---ACCGCAAGAAGCGCTACACCGTG-GTGGGCAACCCCTACTGG 1542
||| ||| .||.|| |.|||| .|.||||.||..||.||| ||| ||||||| ||
Sbjct 1430 AGGTAGCC----CAGGCT-----ACCCAGGCAGCAGCAACAACTGCAACA--GTGTGTGGGCA---------GG 1483
Query 1543 ATGGCACCTGAGATGATCAACGGCCGCAGCTATGATGAGAAGGTGGATGTGTTCTCCTTTGGGATCGTCCTGTG 1616
||||.||| ||| ||| ||.||| |.||.|
Sbjct 1484 --GGCATCTG-----------GGC-------------AGA-------------CTTCTT--GAATTG------- 1509
Query 1617 CGAGA-TCATCGGGCGGGTGAACGCAGACCCTGACTACCTGCCCCGCA---CCATGGACTTTGGCCTCAACGTG 1686
|||| | || ||||| .||| ||.|||| ||| |||
Sbjct 1510 -GAGACT-----------TG---GCAGA----------------GGCATGTCCGTGGA----GGC--CAA---- 1542
Query 1687 CGAGGATTCCTGGACCGCTACTGCCCCCCAAACTGCCCCCCGAGCTTCTTCCCCATCACCGTGCGCTGTT-GCG 1759
||||||....|| |||.|.| ||||.||.|| ||.| ||| |.|
Sbjct 1543 -GAGGATAAGAGG---------------CAATCAG--CCCCAAGTTT----------ACAG------GTTGGTG 1582
Query 1760 ATCTGGACCCCGAGAAGAGGCCATCCTTTGTGAAGCTGGAACACTGG------CTGGAGACCCTCCGCATGCAC 1827
.||| || ||| |||..||| ||||| ||||.|| |||.|
Sbjct 1583 TTCT--AC----AGA-----------------AAGTAGGA--ACTGGCCCAAACTGGGGA------GCAAG--- 1622
Query 1828 CTGGCCGGCCACCTGCCACTGGGCCCACAGCTGGAGCAGCTGGACAGAGGTTTCTGGGAGACCTACCGGCGCGG 1901
||||
Sbjct 1623 -------------TGCC--------------------------------------------------------- 1626
Query 1902 CGAGAGCGGACTGCCTGCCCACCCTGAGGTCCCCGAC 1938
Sbjct 1627 ------------------------------------- 1626