Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_14692
- Subject:
- NR_134935.2
- Aligned Length:
- 3972
- Identities:
- 1371
- Gaps:
- 2601
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACACAAGACGCCGGAGCTTCACAAGGGAGCGAACGAGGGTGTTTATAAGAATGGAAGTGTTGTTTCCTTGCCCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ATTCCTTCATGCTATATCTCATGAACCTCTGTAATCTTGGGGGAGAGACTATATTTAATGATGACAAACCTGTC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ACCAGTGTAGCAACAACAGTGTGAGGACAAAAGCAAATAAAAATTAAGAAGCGTTCAAATTTATATTCAACAAG 222
Query 1 --------------------------------------------ATGAACCGATACACAACCATGAGACAGTTG 30
||||||||||||||||||||||||||||||
Sbjct 223 GAAGTCATTTCAATCAACAACTTCTGCTGCATTATTTTTCCAAGATGAACCGATACACAACCATGAGACAGTTG 296
Query 31 GGGGACGGCACGTATGGGAGTGTGCTTATGGGCAAGAGTAATGAATCCGGGGAGCTGGTGGCCATCAAAAGGAT 104
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GGGGACGGCACGTATGGGAGTGTGCTTATGGGCAAGAGTAATGAATCCGGGGAGCTGGTGGCCATCAAAAGGAT 370
Query 105 GAAGAGAAAGTTCTATTCTTGGGATGAATGCATGAACTTGAGAGAAGTTAAGTCTCTGAAGAAACTTAATCATG 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GAAGAGAAAGTTCTATTCTTGGGATGAATGCATGAACTTGAGAGAAGTTAAGTCTCTGAAGAAACTTAATCATG 444
Query 179 CCAATGTTATTAAATTGAAAGAAGTTATCAGAGAAAATGACCATCTTTATTTTATATTTGAATATATGAAAGAA 252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CCAATGTTATTAAATTGAAAGAAGTTATCAGAGAAAATGACCATCTTTATTTTATATTTGAATATATGAAAGAA 518
Query 253 AACCTCTATCAATTAATGAAAGACAGAAACAAGTTGTTCCCTGAATCAGTCATCAGAAATATTATGTATCAAAT 326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 AACCTCTATCAATTAATGAAAGACAGAAACAAGTTGTTCCCTGAATCAGTCATCAGAAATATTATGTATCAAAT 592
Query 327 ATTGCAAGGGCTGGCTTTTATCCATAAACATGGCTTTTTTCATAGGGACATGAAACCAGAAAACTTGCTTTGTA 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 ATTGCAAGGGCTGGCTTTTATCCATAAACATGGCTTTTTTCATAGGGACATGAAACCAGAAAACTTGCTTTGTA 666
Query 401 TGGGTCCAGAGCTTGTGAAAATTGCTGATTTTGGACTTGCAAGAGAATTAAGGTCACAGCCACCATACACTGAT 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TGGGTCCAGAGCTTGTGAAAATTGCTGATTTTGGACTTGCAAGAGAATTAAGGTCACAGCCACCATACACTGAT 740
Query 475 TATGTATCTACCAGATGGTATCGTGCCCCTGAAGTTTTACTGAGATCTTCAGTTTATAGTTCTCCCATTGATGT 548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TATGTATCTACCAGATGGTATCGTGCCCCTGAAGTTTTACTGAGATCTTCAGTTTATAGTTCTCCCATTGATGT 814
Query 549 GTGGGCTGTTGGAAGTATCATGGCTGAACTCTATATGTTAAGGCCACTTTTCCCAGGGACAAGTGAGGTCGATG 622
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GTGGGCTGTTGGAAGTATCATGGCTGAACTCTATATGTTAAGGCCACTTTTCCCAGGGACAAGTGAGGTCGATG 888
Query 623 AAATCTTTAAAATTTGCCAAGTTTTAGGGACTCCCAAAAAAAGTGACTGGCCAGAAGGATACCAGCTGGCATCC 696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 AAATCTTTAAAATTTGCCAAGTTTTAGGGACTCCCAAAAAAAGTGACTGGCCAGAAGGATACCAGCTGGCATCC 962
Query 697 TCTATGAACTTCCGTTTTCCCCAGTGTGTTCCTATAAACTTAAAAACTCTTATTCCCAATGCCAGTAATGAAGC 770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 TCTATGAACTTCCGTTTTCCCCAGTGTGTTCCTATAAACTTAAAAACTCTTATTCCCAATGCCAGTAATGAAGC 1036
Query 771 TATTCAGCTCATGACCGAAATGTTGAATTGGGATCCAAAGAAACGACCGACAGCAAGCCAGGCATTGAAACACC 844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 TATTCAGCTCATGACCGAAATGTTGAATTGGGATCCAAAGAAACGACCGACAGCAAGCCAGGCATTGAAACACC 1110
Query 845 CATATTTTCAAGTTGGTCAGGTATTAGGCCCTTCGTCAAATCATCTGGAATCAAAACAGTCTTTAAATAAGCAG 918
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CATATTTTCAAGTTGGTCAGGTATTAGGCCCTTCGTCAAATCATCTGGAATCAAAACAGTCTTTAAATAAGCAG 1184
Query 919 CTGCAACCATTAGAATCAAAGCCATCTTTAGTTGAGGTAGAGCCTAAGCCTCTGCCGGATATAATCGATCAGGT 992
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 CTGCAACCATTAGAATCAAAGCCATCTTTAGTTGAGGTAGAGCCTAAGCCTCTGCCGGATATAATCGATCAGGT 1258
Query 993 TGTTGGACAACCCCAGCCAAAAACTAGCCAGCAGCCACTGCAGCCCATTCAGCCGCCACAGAACCTGAGCGTCC 1066
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 TGTTGGACAACCCCAGCCAAAAACTAGCCAGCAGCCACTGCAGCCCATTCAGCCGCCACAGAACCTGAGCGTCC 1332
Query 1067 AGCAACCTCCAAAGCAACAGAGTCAGGAGAAACCGCCACAAACGCTATTCCCGAGCATCGTCAAAAACATGCCA 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 AGCAACCTCCAAAGCAACAGAGTCAGGAGAAACCGCCACAAACGCTATTCCCGAGCATCGTCAAAAACATGCCA 1406
Query 1141 ACTAAGCCAAATGGCACACTGAGTCATAAAAGTGGTAGGAGGCGTTGGGGTCAGACTATCTTCAAGTCTGGAGA 1214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 ACTAAGCCAAATGGCACACTGAGTCATAAAAGTGGTAGGAGGCGTTGGGGTCAGACTATCTTCAAGTCTGGAGA 1480
Query 1215 TAGCTGGGAAGAGTTGGAGGACTATGATTTCGGAGCCTCCCATTCCAAGAAGCCAAGCATGGGTGTTTTTAAAG 1288
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 TAGCTGGGAAGAGTTGGAGGACTATGATTTCGGAGCCTCCCATTCCAAGAAGCCAAGCATGGGTGTTTTTAAAG 1554
Query 1289 AAAAAAGGAAAAAAGATTCTCCATTTCGTCAACAGGTGAAGATGGCTGTTATTTCCCTCTCAGCACACCAGTTT 1362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 AAAAAAGGAAAAAAGATTCTCCATTTCGTCAACAGGTGAAGATGGCTGTTATTTCCCTCTCAGCACACCAGTTT 1628
Query 1363 CCCACGTTA----------------------------------------------------------------- 1371
|||||||||
Sbjct 1629 CCCACGTTATGAATCCAACTGCAGCCGTTGCAGGACAGATAGAAACATGTTACACACAAGCTTCCAGAGCCAGT 1702
Query 1372 -------------------------------------------------------------------------- 1371
Sbjct 1703 ACCCTCAGGCTCCAACCACTCGACAGGGGAAAACAAGAGCTTACCTGCTGTTACTTCCCTAAAATCTGATTCCG 1776
Query 1372 -------------------------------------------------------------------------- 1371
Sbjct 1777 AATTGTCAACTGCTCCAACCTCTAAACAGTACTACTTGAAACAATCAAGATATCTTCCAGGTGTGAATCCCAAG 1850
Query 1372 -------------------------------------------------------------------------- 1371
Sbjct 1851 AAGGTGTCCTTGATAGCCAGTGGAAAGGAAATAAACCCCCACACTTGGAGCAACCAGTTATTCCCCAAGTCACT 1924
Query 1372 -------------------------------------------------------------------------- 1371
Sbjct 1925 GGGACCCGTTGGGGCAGAACTTGCTTTCAAAAGGAGCAATGCAGGAAATCTTGGAAGTTATGCTACTTACAATC 1998
Query 1372 -------------------------------------------------------------------------- 1371
Sbjct 1999 AGTCAGGATATATTCCTTCCTTTCTCAAAAAAGAAGTGCAGTCAGCTGGCCAGAGGATCCACTTAGCACCTCTC 2072
Query 1372 -------------------------------------------------------------------------- 1371
Sbjct 2073 AATGCAACGGCTTCAGAATATACCTGGAACACAAAAACTGGTCGGGGGCAGTTTTCAGGACGTACTTATAATCC 2146
Query 1372 -------------------------------------------------------------------------- 1371
Sbjct 2147 TACAGCAAAAAACCTAAATATTGTGAACCGTGCACAGCCCATTCCCTCAGTGCATGGGAGGACAGACTGGGTGG 2220
Query 1372 -------------------------------------------------------------------------- 1371
Sbjct 2221 CCAAGTATGGAGGCCACCGGTAGGAGTCTATGGTGTGAAACCCTACAGCATTGCTCCGTAGAGTACGTGCAAGT 2294
Query 1372 -------------------------------------------------------------------------- 1371
Sbjct 2295 TCCTTGACCCTGGGAAATGTCTACAAATGTCTATTTCTACTGAGTTCTGGAAGAAATATGCAAAAGTGGGTACT 2368
Query 1372 -------------------------------------------------------------------------- 1371
Sbjct 2369 TGGAAGGGCAAAAATCATCCCCTATTTTACTTATTTCCAAGAAATGCATTTTCTTAGCATCATTGCCCACAGTG 2442
Query 1372 -------------------------------------------------------------------------- 1371
Sbjct 2443 TTGATATATGGGTAGGATGTTACAAAGTATTGAATAAACTATTTGCCAAAGTATGAAGTATTTGATCTACAATT 2516
Query 1372 -------------------------------------------------------------------------- 1371
Sbjct 2517 TAATAAATAGTAAATCCAATAAGAACCCTTAAAAAAAAACAACTTCCAGAAAATGTTTAGAGTGTTTTAGTTTT 2590
Query 1372 -------------------------------------------------------------------------- 1371
Sbjct 2591 CATTTGTTGTATGTGCCCAAATGGTTTAGTAGTTCTTCACTTTGCTGTGGTTGGCTTAAGAGGTTTGTCTTTTG 2664
Query 1372 -------------------------------------------------------------------------- 1371
Sbjct 2665 TTTTTGTACAGCAGTTGGGCCAACCTTTGCTGGCTGTCAGCTGTGGTTCTTATTTGACTAAGGCTCTGCGCTGC 2738
Query 1372 -------------------------------------------------------------------------- 1371
Sbjct 2739 CATTTTGTCAATGACAGAAAGATTGCAATTATTTGTTTTTCTACTTTGAAGCTATGGGAGCGATGGTAATTTCA 2812
Query 1372 -------------------------------------------------------------------------- 1371
Sbjct 2813 ATCTTGAGCAGGATATCTTTTTTTTTTTTTTTGAGGCGATGTTTCACTCTTGTGTCCAGGCTGGAGTGCAGTGG 2886
Query 1372 -------------------------------------------------------------------------- 1371
Sbjct 2887 CACTATCTTGGCTTACTGCAACCTCCACCTCCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCGAGTAGCTG 2960
Query 1372 -------------------------------------------------------------------------- 1371
Sbjct 2961 GGATTAGAGGCGTGTGCCACCATGCCTGGCTAATTTTTGTAGTATTAGTAGAGACAGGGTTTCACCATGTTGGT 3034
Query 1372 -------------------------------------------------------------------------- 1371
Sbjct 3035 CAGGCTCAGGCTGGTCTCAAACTCCTGACCTCAGGTGATCCACCTGCCTCGGCCTCCCAAAGTGCAGGGCTTAC 3108
Query 1372 -------------------------------------------------------------------------- 1371
Sbjct 3109 AGGTGTGAGCCACAGTGCCCAGCTTTTTTTTTTTTTTTTTAGAAATAAATTTATCTTTAACATAGAGAATATCA 3182
Query 1372 -------------------------------------------------------------------------- 1371
Sbjct 3183 AAGTTATGCCACTTGATTTTAGTGGACGGCTTGTGTTTTGATCTTGACCAGTACAGTTCCCATGAATTCAAGGT 3256
Query 1372 -------------------------------------------------------------------------- 1371
Sbjct 3257 GACAATCAAGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGGACATCATTAAGA 3330
Query 1372 -------------------------------------------------------------------------- 1371
Sbjct 3331 AAGTTCTGGAAACTGTGTTTGTTTGATGCTGGTTCATTGGACTTTTCAAATTGTTTTGTTTCTGTGTCCCTACC 3404
Query 1372 -------------------------------------------------------------------------- 1371
Sbjct 3405 AGACACAAAGATGAAGTGTGCCAGCTGGTTCCCCCAAGCCAGCTCATGCTGCTGACCACTGACTCAGCTCTGAC 3478
Query 1372 -------------------------------------------------------------------------- 1371
Sbjct 3479 CTTCACATTTGCTCTGAAGCAAGTGCGTTCAGCTGCTGGGGCAGTGATATCACATAGTACATATATTATTTCCT 3552
Query 1372 -------------------------------------------------------------------------- 1371
Sbjct 3553 TAGTTTATTTCCAAACTGGTATTTTAAATAGACACTTCGAACTTTGGGCTACTCTGTTTAAATCTGCCACTTTC 3626
Query 1372 -------------------------------------------------------------------------- 1371
Sbjct 3627 TGGACTGGACCTTAGTACTGTAAATTCTTTTTAAAGAATAATAATGTTACCAACTGCTGAGATTTTTATGTATT 3700
Query 1372 -------------------------------------------------------------------------- 1371
Sbjct 3701 TTGTGACTTTGTAACAACTGCTATTGTAATAAGTGTCATCTTGTGGGCATTATACAAAGGCATATTATAAAATA 3774
Query 1372 -------------------------------------------------------------------------- 1371
Sbjct 3775 ATAATGATATTTTTGTATAGAAGAGTCAACTGTTCAGATGTAAGATGTTGAAAAATGTTAAAATCTAAAGAGTA 3848
Query 1372 -------------------------------------------------------------------------- 1371
Sbjct 3849 ATTTATCCTAGTGGTAATGGTTATATGTATTTGTACAGTTTAAATTAATGTCTCAAAGCTGTGCAGTCTTTTGT 3922
Query 1372 -------------------------------------------------- 1371
Sbjct 3923 TACTGGGACACTTTTAAACTCTGAATAGGCATTAAAAAAAATATGGCTAA 3972
