Construct: ORF ccsbBroadEn_14692

Construct Description:

• Construct Type: ORF
• Other Identifiers: ORF015375.2_s300c1, BRDN0000458355
• DNA Barcode: None
• Epitope Tag: None
• Notes: No stop codon in insert

Originally Annotated References:

• Gene: MAK (4117)

Vector Information:

• Vector Backbone: pDONR223
• Pol II Cassette 1: n/a
• Pol II Cassette 2: n/a
• Selection Marker: n/a
• Visible Reporter: n/a
• Epitope Tag: n/a

Current transcripts matched by this ORF:

	Taxon	Gene	Symbol	Description	Transcript	Nuc. Match %	Prot. Match %	Match Diffs
1	human	4117	MAK	male germ cell associated k...	XM_017010866.2	95.9%	96%	1317_1317delGins55
2	human	4117	MAK	male germ cell associated k...	XM_024446444.1	86.6%	83.2%	(many diffs)
3	human	4117	MAK	male germ cell associated k...	NM_001242385.1	77%	75.8%	(many diffs)
4	human	4117	MAK	male germ cell associated k...	XM_011514622.3	77%	75.8%	(many diffs)
5	human	4117	MAK	male germ cell associated k...	XR_926220.3	73.5%		(many diffs)
6	human	4117	MAK	male germ cell associated k...	XR_001743419.2	73.3%		(many diffs)
7	human	4117	MAK	male germ cell associated k...	XM_017010865.1	73.3%	69%	(many diffs)
8	human	4117	MAK	male germ cell associated k...	NM_005906.5	72.1%	71%	(many diffs)
9	human	4117	MAK	male germ cell associated k...	XM_017010864.2	72.1%	71%	(many diffs)
10	human	4117	MAK	male germ cell associated k...	NM_001242957.2	69.3%	68.3%	(many diffs)
11	human	4117	MAK	male germ cell associated k...	XM_011514619.2	69.3%	68.3%	(many diffs)
12	human	4117	MAK	male germ cell associated k...	XM_011514620.2	69.3%	68.3%	(many diffs)
13	human	4117	MAK	male germ cell associated k...	XM_017010863.2	69.3%	68.3%	(many diffs)
14	human	4117	MAK	male germ cell associated k...	XM_011514621.2	66%	62.2%	(many diffs)
15	human	4117	MAK	male germ cell associated k...	XR_002956283.1	62.4%		(many diffs)
16	human	4117	MAK	male germ cell associated k...	XR_926215.3	58.4%		(many diffs)
17	human	4117	MAK	male germ cell associated k...	XM_024446443.1	40.3%	39.2%	(many diffs)
18	human	4117	MAK	male germ cell associated k...	NR_134935.2	34.5%		1_266del;1638_3972del
19	human	4117	MAK	male germ cell associated k...	NR_134936.2	32.1%		(many diffs)
20	human	4117	MAK	male germ cell associated k...	XM_011514624.2	29.3%	28.3%	(many diffs)
21	mouse	17152	Mak	male germ cell-associated k...	XM_006516873.2	63.4%	64.1%	(many diffs)
22	mouse	17152	Mak	male germ cell-associated k...	XM_006516872.2	59.4%	60.1%	(many diffs)
23	mouse	17152	Mak	male germ cell-associated k...	NM_008547.2	59.3%	60%	(many diffs)
24	mouse	17152	Mak	male germ cell-associated k...	XM_006516871.2	59.3%	60%	(many diffs)
25	mouse	17152	Mak	male germ cell-associated k...	XM_006516870.2	57.5%	58.2%	(many diffs)
26	mouse	17152	Mak	male germ cell-associated k...	NM_001145803.1	57.1%	57.8%	(many diffs)
27	mouse	17152	Mak	male germ cell-associated k...	XM_006516868.2	57%	57.7%	(many diffs)
28	mouse	17152	Mak	male germ cell-associated k...	XM_006516869.1	57%	57.7%	(many diffs)

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:

66

ORF end:

1437

ORF length:

1371

Sequence:

1	gttcgttgca acaaattgat gagcaatgct tttttataat gccaactttg tacaaaaaag
61	ttggcatgaa ccgatacaca accatgagac agttggggga cggcacgtat gggagtgtgc
121	ttatgggcaa gagtaatgaa tccggggagc tggtggccat caaaaggatg aagagaaagt
181	tctattcttg ggatgaatgc atgaacttga gagaagttaa gtctctgaag aaacttaatc
241	atgccaatgt tattaaattg aaagaagtta tcagagaaaa tgaccatctt tattttatat
301	ttgaatatat gaaagaaaac ctctatcaat taatgaaaga cagaaacaag ttgttccctg
361	aatcagtcat cagaaatatt atgtatcaaa tattgcaagg gctggctttt atccataaac
421	atggcttttt tcatagggac atgaaaccag aaaacttgct ttgtatgggt ccagagcttg
481	tgaaaattgc tgattttgga cttgcaagag aattaaggtc acagccacca tacactgatt
541	atgtatctac cagatggtat cgtgcccctg aagttttact gagatcttca gtttatagtt
601	ctcccattga tgtgtgggct gttggaagta tcatggctga actctatatg ttaaggccac
661	ttttcccagg gacaagtgag gtcgatgaaa tctttaaaat ttgccaagtt ttagggactc
721	ccaaaaaaag tgactggcca gaaggatacc agctggcatc ctctatgaac ttccgttttc
781	cccagtgtgt tcctataaac ttaaaaactc ttattcccaa tgccagtaat gaagctattc
841	agctcatgac cgaaatgttg aattgggatc caaagaaacg accgacagca agccaggcat
901	tgaaacaccc atattttcaa gttggtcagg tattaggccc ttcgtcaaat catctggaat
961	caaaacagtc tttaaataag cagctgcaac cattagaatc aaagccatct ttagttgagg
1021	tagagcctaa gcctctgccg gatataatcg atcaggttgt tggacaaccc cagccaaaaa
1081	ctagccagca gccactgcag cccattcagc cgccacagaa cctgagcgtc cagcaacctc
1141	caaagcaaca gagtcaggag aaaccgccac aaacgctatt cccgagcatc gtcaaaaaca
1201	tgccaactaa gccaaatggc acactgagtc ataaaagtgg taggaggcgt tggggtcaga
1261	ctatcttcaa gtctggagat agctgggaag agttggagga ctatgatttc ggagcctccc
1321	attccaagaa gccaagcatg ggtgttttta aagaaaaaag gaaaaaagat tctccatttc
1381	gtcaacaggt gaagatggct gttatttccc tctcagcaca ccagtttccc acgttatgcc
1441	caactttctt gtacaaagtt ggcattataa gaaagcattg cttatcaatt tgttgcaacg
1501	aac

Download FASTA