Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_14692
Subject:
XM_006516873.2
Aligned Length:
1785
Identities:
1132
Gaps:
456

Alignment

Query    1  ATGAACCGATACACAACCATGAGACAGTTGGGGGACGGCACGTATGGGAGTGTGCTTATGGGCAAGAGTAATGA  74
            ||||||||||||||||||||||..|||.||||.||||||||||||||||||||.||.|||||||||||.|||||
Sbjct    1  ATGAACCGATACACAACCATGAAGCAGCTGGGAGACGGCACGTATGGGAGTGTACTGATGGGCAAGAGCAATGA  74

Query   75  ATCCGGGGAGCTGGTGGCCATCAAAAGGATGAAGAGAAAGTTCTATTCTTGGGATGAATGCATGAACTTGAGAG  148
            .||.||||||||||||||.|||||.||||||||||||||||||||||||||||||||.||.|||||||||.|||
Sbjct   75  GTCTGGGGAGCTGGTGGCAATCAAGAGGATGAAGAGAAAGTTCTATTCTTGGGATGAGTGTATGAACTTGCGAG  148

Query  149  AAGTTAAGTCTCTGAAGAAACTTAATCATGCCAATGTTATTAAATTGAAAGAAGTTATCAGAGAAAATGACCAT  222
            ||||||||||.|||||.|||||.|||||.||||||||.||||||.|.|||||||||||||||||.|||||||||
Sbjct  149  AAGTTAAGTCCCTGAAAAAACTCAATCACGCCAATGTGATTAAACTAAAAGAAGTTATCAGAGAGAATGACCAT  222

Query  223  CTTTATTTTATATTTGAATATATGAAAGAAAACCTCTATCAATTAATGAAAGACAGAAACAAGTTGTTCCCTGA  296
            |||||||||.|||||||||||||||||||||||||||||||..|||||||||||||||||||..||||||||||
Sbjct  223  CTTTATTTTGTATTTGAATATATGAAAGAAAACCTCTATCAGCTAATGAAAGACAGAAACAAACTGTTCCCTGA  296

Query  297  ATCAGTCATCAGAAATATTATGTATCAAATATTGCAAGGGCTGGCTTTTATCCATAAACATGGCTTTTTTCATA  370
            .||||||||||||||||||||||||||.|||.|.||.||||||||.||||||||||||||.|||||||||||.|
Sbjct  297  GTCAGTCATCAGAAATATTATGTATCAGATACTACAGGGGCTGGCATTTATCCATAAACACGGCTTTTTTCACA  370

Query  371  GGGACATGAAACCAGAAAACTTGCTTTGTATGGGTCCAGAGCTTGTGAAAATTGCTGATTTTGGACTTGCAAGA  444
            |||||||||||||.||.||||||||.||.|||||.||||||||.|||||.||||||||||||||||||||||||
Sbjct  371  GGGACATGAAACCTGAGAACTTGCTCTGCATGGGCCCAGAGCTGGTGAAGATTGCTGATTTTGGACTTGCAAGA  444

Query  445  GAATTAAGGTCACAGCCACCATACACTGATTATGTATCTACCAGATGGTATCGTGCCCCTGAAGTTTTACTGAG  518
            ||||||||.||||||||||||||.|||||.|||||.||||||||||||||.||.||.||||||||.|||||.||
Sbjct  445  GAATTAAGATCACAGCCACCATATACTGACTATGTGTCTACCAGATGGTACCGGGCTCCTGAAGTCTTACTAAG  518

Query  519  ATCTTCAGTTTATAGTTCTCCCATTGATGTGTGGGCTGTTGGAAGTATCATGGCTGAACTCTATATGTTAAGGC  592
            .|||||.||.||.||.|||||||||||.||||||||.||.||||||||.|||||.||..|.||||..||.||||
Sbjct  519  GTCTTCGGTGTACAGCTCTCCCATTGACGTGTGGGCCGTGGGAAGTATAATGGCCGAGTTATATACATTTAGGC  592

Query  593  CACTTTTCCCAGGGACAAGTGAGGTCGATGAAATCTTTAAAATTTGCCAAGTTTTAGGGACTCCCAAAAAAAGT  666
            |.||||||||||||||||||||.||.|||||.|||||||||||.||||||||.||||||||||||||.||.|||
Sbjct  593  CGCTTTTCCCAGGGACAAGTGAAGTTGATGAGATCTTTAAAATCTGCCAAGTGTTAGGGACTCCCAAGAAGAGT  666

Query  667  GACTGGCCAGAAGGATACCAGCTGGCATCCTCTATGAACTTCCGTTTTCCCCAGTGTGTTCCTATAAACTTAAA  740
            ||||||||.||||||||||||||.||||||||.|||||||||||.|||||||||||..||||.||.|||.||||
Sbjct  667  GACTGGCCGGAAGGATACCAGCTTGCATCCTCCATGAACTTCCGCTTTCCCCAGTGCATTCCCATCAACCTAAA  740

Query  741  AACTCTTATTCCCAATGCCAGTAATGAAGCTATTCAGCTCATGACCGAAATGTTGAATTGGGATCCAAAGAAAC  814
            ||||||.||||||||||||||||..||.||.||.|||||||||||.||.|||.||||.||||||||||||||.|
Sbjct  741  AACTCTCATTCCCAATGCCAGTAGCGAGGCCATCCAGCTCATGACAGAGATGCTGAACTGGGATCCAAAGAAGC  814

Query  815  GACCGACAGCAAGCCAGGCATTGAAACACCCATATTTTCAAGTTGGTCAGGTATTAGGCCCTTCGTCAAATCAT  888
            ||||.|||||||||||||||.||||||||||||||||.|||||.|||||||||.|.|||.||||..||.|.|||
Sbjct  815  GACCAACAGCAAGCCAGGCACTGAAACACCCATATTTCCAAGTCGGTCAGGTACTGGGCTCTTCTGCACACCAT  888

Query  889  CTGGAATCAAAACAGTCTTTAAATAAGCAGCTGCAACCATTAGAATCAAAGCCATCTTTAGTTGA--GGTAGAG  960
            |||||..||||||||.|||||.|.|||||||||||.||..|.||..||||||||||||....|||  ||  ||.
Sbjct  889  CTGGATACAAAACAGACTTTACACAAGCAGCTGCAGCCTCTGGAGCCAAAGCCATCTTCCTCTGAACGG--GAT  960

Query  961  CCTAAGCCTCTGCCGGATATAATCGATCAGGTTGTTGGACAACCCCAGCCAAAAACTAGCCAGCAGCCACTGCA  1034
            |||||||||.||||..|.|||.|.||||||..||..||.||.||||||||||||....||||.||.||||||||
Sbjct  961  CCTAAGCCTTTGCCAAACATACTTGATCAGCCTGCCGGGCAGCCCCAGCCAAAACAGGGCCACCAACCACTGCA  1034

Query 1035  GCCCATTCAGCCGCCACAGAAC-CTGAGCGTC-CAGCAACCTCCAAAGCAACAGAGTCAGGAGAAACCGCCACA  1106
            |.||||||||||.||||||||| |  ||.|.| ||.|.|||.||||||||.|||.||||..|||||||.|||||
Sbjct 1035  GACCATTCAGCCACCACAGAACAC--AGTGACTCACCCACCCCCAAAGCAGCAGGGTCACCAGAAACCACCACA  1106

Query 1107  AACGCTATTCCCGAGCATCGTCAAAAACATGCC----AACTAAGCCAAATGGCACACTGAGTCATAAAAGTGGT  1176
            |||..|.||.||.||.|||.||||||.|||.||    ||.|.||.||    ||||.|||.|.|||||    ||.
Sbjct 1107  AACCATGTTTCCAAGTATCATCAAAACCATCCCAGTGAATTCAGTCA----GCACCCTGGGCCATAA----GGG  1172

Query 1177  A----GGAGGCGTTGGGGTCAGACTATCTTCAAGTCTGGAGATAGCTGGGAAGAGTTGGAGGACTATGATTTCG  1246
            |    ||||.||.|||||||||||..||||||||||||||||.|||||.||.||..|.||||||   ||.||.|
Sbjct 1173  AGCCCGGAGACGGTGGGGTCAGACAGTCTTCAAGTCTGGAGACAGCTGTGACGACATTGAGGAC---GACTTAG  1243

Query 1247  GAGCCTCCCATTCCAAGAAGCCAAGCATGGGTGTTTTTAAAGAAAAAAGGAAAAAAGATTCTCCATTTCG---T  1317
            ||||||||||.|||||||||||||||||||..|..|..||.||.||   |||.||.||.|||||||||||   |
Sbjct 1244  GAGCCTCCCACTCCAAGAAGCCAAGCATGGAAGCCTGCAAGGAGAA---GAAGAAGGAGTCTCCATTTCGGTTT  1314

Query 1318  CAACAGGTGAAGATGGCTGTTATTTCCCTCTCAGCAC-ACCAGTTTCC---CACGTTA----------------  1371
            |  |||.|                      ||||.|| .|||||.|||   |||.|||                
Sbjct 1315  C--CAGAT----------------------TCAGGACTCCCAGTCTCCAATCACTTTAAGGGGGAAAATAGGAA  1364

Query 1372  --------------------------------------------------------------------------  1371
                                                                                      
Sbjct 1365  TTTACATGCATCTGTTTCCTTAAAATCTGATCCAAACTTGTCAACTGCTTCAACGGCTAAGCAGTACTATTTGA  1438

Query 1372  --------------------------------------------------------------------------  1371
                                                                                      
Sbjct 1439  AACAATCAAGATACCTTCCAGGTGTGAACCCCAAGAATGTGTCTTTGGTAGCTGGAGGCAAGGATATAAATTCA  1512

Query 1372  --------------------------------------------------------------------------  1371
                                                                                      
Sbjct 1513  CACTCTTGGAATAATCAGCTATTTCCTAAGTCGCTGGGATCCATGGGGGCGGACCTTTCCTTCAAGAGGAGTAA  1586

Query 1372  --------------------------------------------------------------------------  1371
                                                                                      
Sbjct 1587  CGCAGACTATACCTGGAGCACAAAAACTGGACGAGGCCAGTTTTCGGGACGAACTTACAACCCCACAGCCAAAA  1660

Query 1372  --------------------------------------------------------------------------  1371
                                                                                      
Sbjct 1661  ATCTCAATATTGTGAACCGCACACAGCCAGTCCCCTCGGTACACGGGAGGACAGACTGGGTGGCTAAGTATGGA  1734

Query 1372  ---------  1371
                     
Sbjct 1735  GGCCACCGG  1743

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