Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_14737
- Subject:
- NR_103729.2
- Aligned Length:
- 2952
- Identities:
- 1308
- Gaps:
- 1644
Alignment
Query 1 -------------------------------------------------------------ATGAGGCTGGCGC 13
|||||||||||||
Sbjct 1 ACTCGGCAGAGGCGCGGGGAAACCTGGCGTACTGGCTGTGGCTTCTCTAGCGGGACTCGGCATGAGGCTGGCGC 74
Query 14 GGCTGCTTCGCGGAGCCGCCTTGGCCGGCCCGGGCCCGGGGCTGCGCGCCGCCGGCTTCAGCCGCAGCTTCAGC 87
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GGCTGCTTCGCGGAGCCGCCTTGGCCGGCCCGGGCCCGGGGCTGCGCGCCGCCGGCTTCAGCCGCAGCTTCAGC 148
Query 88 TCGGACTCGGGCTCCAGCCCGGCGTCCGAGCGCGGCGTTCCGGGCCAGGTGGACTTCTACGCGCGCTTCTCGCC 161
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TCGGACTCGGGCTCCAGCCCGGCGTCCGAGCGCGGCGTTCCGGGCCAGGTGGACTTCTACGCGCGCTTCTCGCC 222
Query 162 GTCCCCGCTCTCCATGAAGCAGTTCCTGGACTTCGGATCAGTGAATGCTTGTGAAAAGACCTCATTTATGTTTC 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GTCCCCGCTCTCCATGAAGCAGTTCCTGGACTTCGGATCAGTGAATGCTTGTGAAAAGACCTCATTTATGTTTC 296
Query 236 TGCGGCAAGAGTTGCCTGTCAGACTGGCAAATATAATGAAAGAAATAAGTCTCCTTCCAGATAATCTTCTCAGG 309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TGCGGCAAGAGTTGCCTGTCAGACTGGCAAATATAATGAAAGAAATAAGTCTCCTTCCAGATAATCTTCTCAGG 370
Query 310 ACACCATCCGTTCAATTGGTACAAAGCTGGTATATCCAGAGTCTTCAGGAGCTTCTTGATTTTAAGGACAAAAG 383
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 ACACCATCCGTTCAATTGGTACAAAGCTGGTATATCCAGAGTCTTCAGGAGCTTCTTGATTTTAAGGACAAAAG 444
Query 384 TGCTGAGGATGCTAAAGCTATTTATGACTTTACAGATACTGTGATACGGATCAGAAACCGACACAATGATGTCA 457
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TGCTGAGGATGCTAAAGCTATTTATGACTTTACAGATACTGTGATACGGATCAGAAACCGACACAATGATGTCA 518
Query 458 TTCCCACAATGGCCCAGGGTGTGATTGAATACAAGGAGAGCTTTGGGGTGGATCCTGTCACCAGCCAGAATGTT 531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TTCCCACAATGGCCCAGGGTGTGATTGAATACAAGGAGAGCTTTGGGGTGGATCCTGTCACCAGCCAGAATGTT 592
Query 532 CAGTACTTTTTGGATCGATTCTACATGAGTCGCATTTCAATTAGAATGTTACTCAATCAGCACTCTTTATTGTT 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CAGTACTTTTTGGATCGATTCTACATGAGTCGCATTTCAATTAGAATGTTACTCAATCAGCACTCTTTATTGTT 666
Query 606 TGGTGGAAAAGGCAAAGGAAGTCCATCTCATCGAAAACACATTGGAAGCATAAATCCAAACTGCAATGTACTTG 679
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TGGTGGAAAAGGCAAAGGAAGTCCATCTCATCGAAAACACATTGGAAGCATAAATCCAAACTGCAATGTACTTG 740
Query 680 AAGTTATTAAAGATGGCTATGAAAATGCTAGGCGTCTGTGTGATTTGTATTATATTAACTCTCCCGAACTAGAA 753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 AAGTTATTAAAGATGGCTATGAAAATGCTAGGCGTCTGTGTGATTTGTATTATATTAACTCTCCCGAACTAGAA 814
Query 754 CTTGAAGAACTAAATGCAAAATCACCAGGACAGCCAATACAAGTGGTTTATGTACCATCCCATCTCTATCACAT 827
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CTTGAAGAACTAAATGCAAAATCACCAGGACAGCCAATACAAGTGGTTTATGTACCATCCCATCTCTATCACAT 888
Query 828 GGTGTTTGAACTTTTCAAGAATGCAATGAGAGCCACTATGGAACACCATGCCAACAGAGGTGTTTACCCCCCTA 901
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GGTGTTTGAACTTTTCAAGAATGCAATGAGAGCCACTATGGAACACCATGCCAACAGAGGTGTTTACCCCCCTA 962
Query 902 TTCAAGTTCATGTCACGCTGGGTAATGAGGATTTGACTGTGAAGATGAGTGACCGAGGAGGTGGCGTTCCTTTG 975
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 TTCAAGTTCATGTCACGCTGGGTAATGAGGATTTGACTGTGAAGATGAGTGACCGAGGAGGTGGCGTTCCTTTG 1036
Query 976 AGGAAAATTGACAGACTTTTCAACTACATGTATTCAACTGCACCAAGACCTCGTGTTGAGACCTCCCGCGCAGT 1049
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 AGGAAAATTGACAGACTTTTCAACTACATGTATTCAACTGCACCAAGACCTCGTGTTGAGACCTCCCGCGCAGT 1110
Query 1050 GCCTCTGGCTGGTTTTGGTTATGGATTGCCCATATCACGTCTTTACGCACAATACTTCCAAGGAGACCTGAAGC 1123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GCCTCTGGCTGGTTTTGGTTATGGATTGCCCATATCACGTCTTTACGCACAATACTTCCAAGGAGACCTGAAGC 1184
Query 1124 TGTATTCCCTAGAGGGTTACGGGACAGATGCAGTTATCTACATTAAGGCTCTGTCAACAGACTCAATAGAAAGA 1197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 TGTATTCCCTAGAGGGTTACGGGACAGATGCAGTTATCTACATTAAGGCTCTGTCAACAGACTCAATAGAAAGA 1258
Query 1198 CTCCCAGTGTATAACAAAGCTGCCTGGAAGCATTACAACACCAACCACGAGGCTGATGACTGGTGCGTCCCCAG 1271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 CTCCCAGTGTATAACAAAGCTGCCTGGAAGCATTACAACACCAACCACGAGGCTGATGACTGGTGCGTCCCCAG 1332
Query 1272 CAGAGAACCCAAAGACATGACGACGTTCCGCAGTGCC------------------------------------- 1308
|||||||||||||||||||||||||||||||||||||
Sbjct 1333 CAGAGAACCCAAAGACATGACGACGTTCCGCAGTGCCTAGACACACTTGGGACATCGGAAAATCCAAATGTGGC 1406
Query 1309 -------------------------------------------------------------------------- 1308
Sbjct 1407 TTTTGTATTAAATTTGGAAGTGTGGCCCAGAGTTGCTCAGAATTGGAGCAGAGCCTGAGACGTATCTGCAGATC 1480
Query 1309 -------------------------------------------------------------------------- 1308
Sbjct 1481 CTGTCATCAGCTGGCAAGTCCAGGAGACTGTGTCATTTAGAGACTGTGTTGTTAGTTATCCCTCAACATCTTCT 1554
Query 1309 -------------------------------------------------------------------------- 1308
Sbjct 1555 AAGGTGGCAGGAAATAATATTGGAAATAACATTTTAAAGTAAAAATTTTAAAGTTTAAAGAAGAGTTTTGCCAC 1628
Query 1309 -------------------------------------------------------------------------- 1308
Sbjct 1629 TTAAACAGGGGAGCTTTGTCTGGAAAATACACTGAGTTGAAACACTTCATCCTTGGAAGGATTATATAAGATGA 1702
Query 1309 -------------------------------------------------------------------------- 1308
Sbjct 1703 ACAGTTGTGATAAATGTGTAGATTAGAGGGATGTGAATGGGCAGTTAGTCCAGTGCCCTCATTTAAGAGGCCAA 1776
Query 1309 -------------------------------------------------------------------------- 1308
Sbjct 1777 GATCCTGATTCAGAGGAGGCATCCTTTGCCCAGAGCTGCTTAGCTAATCTGACCAAATGTTGGGAAAAATGTCT 1850
Query 1309 -------------------------------------------------------------------------- 1308
Sbjct 1851 CACCTAACCCACTATTCCTTAATTATGGATTTTGTGAAAAACAATAGAACATGTTAATGAGTAATTTATATTAG 1924
Query 1309 -------------------------------------------------------------------------- 1308
Sbjct 1925 TTCGATGTATTACAATTTTTTAGCTTTAAATTACAGTTTTCTTATAATGTTGAAATGTTTTAGAATCCTTTGAA 1998
Query 1309 -------------------------------------------------------------------------- 1308
Sbjct 1999 TCTAAGTATTTGTTTCCTAAATGAAACATTTGTACAACATTTGATGTTTTTACTTATGAAATATTCTCCTCCCC 2072
Query 1309 -------------------------------------------------------------------------- 1308
Sbjct 2073 CAAGAAAATTTAAACTTTTTCTCTCTATTTAAAAGCTAAGAAATGTTTTAAAGGAAAAATGAAATTATCTTCCT 2146
Query 1309 -------------------------------------------------------------------------- 1308
Sbjct 2147 TTAGCTTATTTTTAAGGTAAAACAGCTTTTTACTCTGTTATTGTGGTAATGGACAGAATATTACATACAAAAAT 2220
Query 1309 -------------------------------------------------------------------------- 1308
Sbjct 2221 ATTCTGGGAGAGCTTTTTCCTAGTTGGTTTTAAATCATTGTGCCACCTGAAAGGTTTTTAGATTTTATAGGAGC 2294
Query 1309 -------------------------------------------------------------------------- 1308
Sbjct 2295 TAATTTGTCCACCAGCATTAATGTAACACAGTGTAGTTATGAAAATATATTGAAGGACAGGAAGTGGACACGAA 2368
Query 1309 -------------------------------------------------------------------------- 1308
Sbjct 2369 GTGATTTTTGTAACCTGAGCAGTTAATGAATGTGCCAACATTTTCTAGGAAGGGACAGCAAGAATATTCTGCTC 2442
Query 1309 -------------------------------------------------------------------------- 1308
Sbjct 2443 TGTAGTTAAAATACTGGCTGGCTTTTGATGTCTTCATGCTTAATTGTGATCACTTTCTTGCACTGTGATGTTTT 2516
Query 1309 -------------------------------------------------------------------------- 1308
Sbjct 2517 TACGTGAATATGTTGAAGTAGAAGTCTACCATATTATTTTATAAAATGTTTTCTGTATGGCAATAAACTGAAAA 2590
Query 1309 -------------------------------------------------------------------------- 1308
Sbjct 2591 CATGGATCAACCCTTCTTTTGAAAATAAACTGAGTCAATTTAGCCTTTTAAAAATATAGTCATCTCTTTTAAAT 2664
Query 1309 -------------------------------------------------------------------------- 1308
Sbjct 2665 AGAATCCTCTTCCACCATCAAGGCTCAACATTTTGTAAGCATCCAAAAAATTGGTAATTAGGGGGCTTGCACTA 2738
Query 1309 -------------------------------------------------------------------------- 1308
Sbjct 2739 AATTTCACTATCTTCAGTAGAGAGGAACTGTTTGGAACTTAGATTTCCAATGTGTATATTCTAATGGAGAAAGC 2812
Query 1309 -------------------------------------------------------------------------- 1308
Sbjct 2813 AAGAGGTAGAGTTTGTATGTTTGACTTACCTTAGATTTTTATTTTCCATACATACTGCAAATGATTGACTTGTT 2886
Query 1309 ------------------------------------------------------------------ 1308
Sbjct 2887 GCATAAATGAAGATCTTCTGTTGTGTGCTTTTCAAACACTGTAAATAAATTTGAAATTTGAATAAC 2952
