Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_14737
- Subject:
- NR_103731.1
- Aligned Length:
- 2290
- Identities:
- 1249
- Gaps:
- 996
Alignment
Query 1 -----------------------------ATGAGGCT-GGCGCGG-----CTGCT---------TCGCGGAGCC 30
..|||||| .|.|.|| |.||| .|.|.|||||
Sbjct 1 ATAATATGCTCCTTTTTCAGGTAAAGAGACGGAGGCTCAGAGAGGTTAAACAGCTCACTCAAAGGCACAGAGCC 74
Query 31 --GCCTTGGCCGGCC-------CGGGCCCGGGGCTGCGCGCCGC--------------CGGCTTCA-GCCGCAG 80
..|.||||.|..| | .||||||||.|| ||.||| .|||..|| |.|.|||
Sbjct 75 AGTACATGGCAGTACATCTCTTC--TCCCGGGGCCGC-CGTCGCGGTGATACTATTTAGGGCCACACGTCCCAG 145
Query 81 -CTTCAGCT----------CGGACT-------------CGGG--CTCC---AGCCCGGCGTCCGA--------- 116
.||||||| ||.||| |||| |||| |||.| ||.||
Sbjct 146 TGTTCAGCTTTCGTATTTACGTACTACTGTTTGGCAAGCGGGGACTCCTGAAGCTC----TCTGACCCTGGAAA 215
Query 117 --GCGCGGCGTTCCGGGCCAGGTGGA---CTTCT---ACGCGCGCTTCTCGC----CGTCCCCGCTCTCCATG- 177
|||.||| ||.||...|| |.||| .|||| ||||| ||||| ||.|.||||..|...||
Sbjct 216 ATGCGTGGC-TTGCGTCACA-GAGGAGCGTTTCTGGAACGCG-----CTCGCAGCACGACACCGCGGTGTGTGC 282
Query 178 AAGCAG-----------TTCCTGGA--CTT---------------------------------CGGATCAGTGA 205
||||.| .||||.|| ||| .||||||||||
Sbjct 283 AAGCGGAACGCCGCCCTGTCCTTGAGCCTTTTGGCTGAGATTGGGAGGGCAGAGGAAGCAGGAAGGATCAGTGA 356
Query 206 ATGCTTGTGAAAAGACCTCATTTATGTTTCTGCGGCAAGAGTTGCCTGTCAGACTGGCAAATATAATGAAAGAA 279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 357 ATGCTTGTGAAAAGACCTCATTTATGTTTCTGCGGCAAGAGTTGCCTGTCAGACTGGCAAATATAATGAAAGAA 430
Query 280 ATAAGTCTCCTTCCAGATAATCTTCTCAGGACACCATCCGTTCAATTGGTACAAAGCTGGTATATCCAGAGTCT 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 431 ATAAGTCTCCTTCCAGATAATCTTCTCAGGACACCATCCGTTCAATTGGTACAAAGCTGGTATATCCAGAGTCT 504
Query 354 TCAGGAGCTTCTTGATTTTAAGGACAAAAGTGCTGAGGATGCTAAAGCTATTTATGACTTTACAGATACTGTGA 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 505 TCAGGAGCTTCTTGATTTTAAGGACAAAAGTGCTGAGGATGCTAAAGCTATTTATGACTTTACAGATACTGTGA 578
Query 428 TACGGATCAGAAACCGACACAATGATGTCATTCCCACAATGGCCCAGGGTGTGATTGAATACAAGGAGAGCTTT 501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 579 TACGGATCAGAAACCGACACAATGATGTCATTCCCACAATGGCCCAGGGTGTGATTGAATACAAGGAGAGCTTT 652
Query 502 GGGGTGGATCCTGTCACCAGCCAGAATGTTCAGTACTTTTTGGATCGATTCTACATGAGTCGCATTTCAATTAG 575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 653 GGGGTGGATCCTGTCACCAGCCAGAATGTTCAGTACTTTTTGGATCGATTCTACATGAGTCGCATTTCAATTAG 726
Query 576 AATGTTACTCAATCAGCACTCTTTATTGTTTGGTGGAAAAGGCAAAGGAAGTCCATCTCATCGAAAACACATTG 649
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 727 AATGTTACTCAATCAGCACTCTTTATTGTTTGGTGGAAAAGGCAAAGGAAGTCCATCTCATCGAAAACACATTG 800
Query 650 GAAGCATAAATCCAAACTGCAATGTACTTGAAGTTATTAAAGATGGCTATGAAAATGCTAGGCGTCTGTGTGAT 723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 801 GAAGCATAAATCCAAACTGCAATGTACTTGAAGTTATTAAAGATGGCTATGAAAATGCTAGGCGTCTGTGTGAT 874
Query 724 TTGTATTATATTAACTCTCCCGAACTAGAACTTGAAGAACTAAATGCAAAATCACCAGGACAGCCAATACAAGT 797
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 875 TTGTATTATATTAACTCTCCCGAACTAGAACTTGAAGAACTAAATGCAAAATCACCAGGACAGCCAATACAAGT 948
Query 798 GGTTTATGTACCATCCCATCTCTATCACATGGTGTTTGAACTTTTCAAGAATGCAATGAGAGCCACTATGGAAC 871
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 949 GGTTTATGTACCATCCCATCTCTATCACATGGTGTTTGAACTTTTCAAGAATGCAATGAGAGCCACTATGGAAC 1022
Query 872 ACCATGCCAACAGAGGTGTTTACCCCCCTATTCAAGTTCATGTCACGCTGGGTAATGAGGATTTGACTGTGAAG 945
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1023 ACCATGCCAACAGAGGTGTTTACCCCCCTATTCAAGTTCATGTCACGCTGGGTAATGAGGATTTGACTGTGAAG 1096
Query 946 ATGAGTGACCGAGGAGGTGGCGTTCCTTTGAGGAAAATTGACAGACTTTTCAACTACATGTATTCAACTGCACC 1019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1097 ATGAGTGACCGAGGAGGTGGCGTTCCTTTGAGGAAAATTGACAGACTTTTCAACTACATGTATTCAACTGCACC 1170
Query 1020 AAGACCTCGTGTTGAGACCTCCCGCGCAGTGCCTCTGGCTGGTTTTGGTTATGGATTGCCCATATCACGTCTTT 1093
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1171 AAGACCTCGTGTTGAGACCTCCCGCGCAGTGCCTCTGGCTGGTTTTGGTTATGGATTGCCCATATCACGTCTTT 1244
Query 1094 ACGCACAATACTTCCAAGGAGACCTGAAGCTGTATTCCCTAGAGGGTTACGGGACAGATGCAGTTATCTACATT 1167
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1245 ACGCACAATACTTCCAAGGAGACCTGAAGCTGTATTCCCTAGAGGGTTACGGGACAGATGCAGTTATCTACATT 1318
Query 1168 AAGGCTCTGTCAACAGACTCAATAGAAAGACTCCCAGTGTATAACAAAGCTGCCTGGAAGCATTACAACACCAA 1241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1319 AAGGCTCTGTCAACAGACTCAATAGAAAGACTCCCAGTGTATAACAAAGCTGCCTGGAAGCATTACAACACCAA 1392
Query 1242 CCACGAGGCTGATGACTGGTGCGTCCCCAGCAGAGAACCCAAAGACATGACGACGTTCCGCAGTGCC------- 1308
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1393 CCACGAGGCTGATGACTGGTGCGTCCCCAGCAGAGAACCCAAAGACATGACGACGTTCCGCAGTGCCTAGACAC 1466
Query 1309 -------------------------------------------------------------------------- 1308
Sbjct 1467 ACTTGGGACATCGGAAAATCCAAATGTGGCTTTTGTATTAAATTTGGAAGATTCTTCAGTTTTGGGACTTGGAC 1540
Query 1309 -------------------------------------------------------------------------- 1308
Sbjct 1541 TGGCTTTCCTTGCCCCTCAGCTTGCAGATGGCCTGTTGTGGGACCTTGTGATCATGAACTCCTCCTCCCACATC 1614
Query 1309 -------------------------------------------------------------------------- 1308
Sbjct 1615 TGATGGAGCTACCAATCATCAGATCTCCTCTGCCTCTGGGGTGCGTCTCAGGCTGGCCAATCACGTTCTTCATC 1688
Query 1309 -------------------------------------------------------------------------- 1308
Sbjct 1689 CACGTGGACTATGACTGGCCCTAGGGAGAAAACATGGAGATATGAATGACTGTGTGGAGCAGAACCCACCTTCT 1762
Query 1309 -------------------------------------------------------------------------- 1308
Sbjct 1763 CCCAGCTCAGCTTTGGACTGTGAGGTGACAGAAATAAACATTTGTTGTGCTAAGCCACTGAGATTTTGAGTCAT 1836
Query 1309 -------------------------------------------------------------------------- 1308
Sbjct 1837 AACAGCTGTTAGCATCAATGATTCTGACTAATACAGTAGCCCACCATATGATTGTTCACTAGTATGTCTAAAAT 1910
Query 1309 -------------------------------------------------------------------------- 1308
Sbjct 1911 TCCAGGGCTGTGATCAACCACTCTCCCCGTCCCCACTCTGACAGTTAATTGACCTGTGAATTTGCCTTTTATGT 1984
Query 1309 -------------------------------------------------------------------------- 1308
Sbjct 1985 AAATTCTCTTTCTATCCTTACTGCATTATTGTATTTCAGCCTTTGGTTTCCTGACAGATGTAATTGTCCTGTGT 2058
Query 1309 -------------------------------------------------------------------------- 1308
Sbjct 2059 GTCCTTTCTCCAGGCAGAGTGATGTTCCTGGAATGTTCATCTAATCATATCATGCATCTGTTTGTAACTTTCTT 2132
Query 1309 -------------------------------------------------------------------------- 1308
Sbjct 2133 TCTTCAACCTTATCTCCTGCTAGTCCCTGCTATACCTCTCTATGCTTGGAACATATTTTTCTTTAGCCCTTGTT 2206
Query 1309 ---------------------------------------------------------------------- 1308
Sbjct 2207 TTCCAAGGACTGAATCTGTCTCATCTTTTGGGGGCTCTGTGTAAATATTCCTTTATCCAGTAAGCCTGCC 2276
