Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_14737
- Subject:
- XR_001738776.1
- Aligned Length:
- 3008
- Identities:
- 1231
- Gaps:
- 1777
Alignment
Query 1 -------------------------------------------------------------ATGAGGCTGGCGC 13
|||||||||||||
Sbjct 1 ACTCGGCAGAGGCGCGGGGAAACCTGGCGTACTGGCTGTGGCTTCTCTAGCGGGACTCGGCATGAGGCTGGCGC 74
Query 14 GGCTGCTTCGCGGAGCCGCCTTGGCCGGCCCGGGCCCGGGGCTGCGCGCCGCCGGCTTCAGCCGCAGCTTCAGC 87
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GGCTGCTTCGCGGAGCCGCCTTGGCCGGCCCGGGCCCGGGGCTGCGCGCCGCCGGCTTCAGCCGCAGCTTCAGC 148
Query 88 TCGGACTCGGGCTCCAGCCCGGCGTCCGAGCGCGGCGTTCCGGGCCAGGTGGACTTCTACGCGCGCTTCTCGCC 161
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TCGGACTCGGGCTCCAGCCCGGCGTCCGAGCGCGGCGTTCCGGGCCAGGTGGACTTCTACGCGCGCTTCTCGCC 222
Query 162 GTCCCCGCTCTCCATGAAGCAGTTCCTGGACTTCGGATCAGTGAATGCTTGTGAAAAGACCTCATTTATGTTTC 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GTCCCCGCTCTCCATGAAGCAGTTCCTGGACTTCGGATCAGTGAATGCTTGTGAAAAGACCTCATTTATGTTTC 296
Query 236 TGCGGCAAGAGTTGCCTGTCAGACTGGCAAATATAATGAAAGAAATAAGTCTCCTTCCAGATAATCTTCTCAGG 309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TGCGGCAAGAGTTGCCTGTCAGACTGGCAAATATAATGAAAGAAATAAGTCTCCTTCCAGATAATCTTCTCAGG 370
Query 310 ACACCATCCGTTCAATTGGTACAAAGCTGGTATATCCAGAGTCTTCAGGAGCTTCTTGATTTTAAGGACAAAAG 383
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 ACACCATCCGTTCAATTGGTACAAAGCTGGTATATCCAGAGTCTTCAGGAGCTTCTTGATTTTAAGGACAAAAG 444
Query 384 TGCTGAGGATGCTAAAGCTATTTATGA----------------------------------------------- 410
|||||||||||||||||||||||||||
Sbjct 445 TGCTGAGGATGCTAAAGCTATTTATGAAAGGCCTAGAAGAACATGGTTGCAGGTCTCTAGTTTATGCTGTATGG 518
Query 411 -------------CTTTACAGATACTGTGATACGGATCAGAAACCGACACAATGATGTCATTCCCACAATGGCC 471
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CCTGCAAGATGATCTTTACAGATACTGTGATACGGATCAGAAACCGACACAATGATGTCATTCCCACAATGGCC 592
Query 472 CAGGGTGTGATTGAATACAAGGAGAGCTTTGGGGTGGATCCTGTCACCAGCCAGAATGTTCAGTACTTTTTGGA 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CAGGGTGTGATTGAATACAAGGAGAGCTTTGGGGTGGATCCTGTCACCAGCCAGAATGTTCAGTACTTTTTGGA 666
Query 546 TCGATTCTACATGAGTCGCATTTCAATTAGAATGTTACTCAATCAGCACTCTTTATTGTTTGGTGGAAAAGGCA 619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TCGATTCTACATGAGTCGCATTTCAATTAGAATGTTACTCAATCAGCACTCTTTATTGTTTGGTGGAAAAGGCA 740
Query 620 AAGGAAGTCCATCTCATCGAAAACACATTGGAAGCATAAATCCAAACTGCAATGTACTTGAAGTTATTAAAGAT 693
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 AAGGAAGTCCATCTCATCGAAAACACATTGGAAGCATAAATCCAAACTGCAATGTACTTGAAGTTATTAAAGAT 814
Query 694 GGCTATGAAAATGCTAGGCGTCTGTGTGATTTGTATTATATTAACTCTCCCGAACTAGAACTTGAAGAACTAAA 767
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GGCTATGAAAATGCTAGGCGTCTGTGTGATTTGTATTATATTAACTCTCCCGAACTAGAACTTGAAGAACTAAA 888
Query 768 TGCAAAATCACCAGGACAGCCAATACAAGTGGTTTATGTACCATCCCATCTCTATCACATGGTGTTTGAACTTT 841
|
Sbjct 889 T------------------------------------------------------------------------- 889
Query 842 TCAAGAATGCAATGAGAGCCACTATGGAACACCATGCCAACAGAGGTGTTTACCCCCCTATTCAAGTTCATGTC 915
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 890 ----GAATGCAATGAGAGCCACTATGGAACACCATGCCAACAGAGGTGTTTACCCCCCTATTCAAGTTCATGTC 959
Query 916 ACGCTGGGTAATGAGGATTTGACTGTGAAGATGAGTGACCGAGGAGGTGGCGTTCCTTTGAGGAAAATTGACAG 989
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 960 ACGCTGGGTAATGAGGATTTGACTGTGAAGATGAGTGACCGAGGAGGTGGCGTTCCTTTGAGGAAAATTGACAG 1033
Query 990 ACTTTTCAACTACATGTATTCAACTGCACCAAGACCTCGTGTTGAGACCTCCCGCGCAGTGCCTCTGGCTGGTT 1063
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1034 ACTTTTCAACTACATGTATTCAACTGCACCAAGACCTCGTGTTGAGACCTCCCGCGCAGTGCCTCTGGCTGGTT 1107
Query 1064 TTGGTTATGGATTGCCCATATCACGTCTTTACGCACAATACTTCCAAGGAGACCTGAAGCTGTATTCCCTAGAG 1137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1108 TTGGTTATGGATTGCCCATATCACGTCTTTACGCACAATACTTCCAAGGAGACCTGAAGCTGTATTCCCTAGAG 1181
Query 1138 GGTTACGGGACAGATGCAGTTATCTACATTAAGGCTCTGTCAACAGACTCAATAGAAAGACTCCCAGTGTATAA 1211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1182 GGTTACGGGACAGATGCAGTTATCTACATTAAGGCTCTGTCAACAGACTCAATAGAAAGACTCCCAGTGTATAA 1255
Query 1212 CAAAGCTGCCTGGAAGCATTACAACACCAACCACGAGGCTGATGACTGGTGCGTCCCCAGCAGAGAACCCAAAG 1285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1256 CAAAGCTGCCTGGAAGCATTACAACACCAACCACGAGGCTGATGACTGGTGCGTCCCCAGCAGAGAACCCAAAG 1329
Query 1286 ACATGACGACGTTCCGCAGTGCC--------------------------------------------------- 1308
|||||||||||||||||||||||
Sbjct 1330 ACATGACGACGTTCCGCAGTGCCTAGACACACTTGGGACATCGGAAAATCCAAATGTGGCTTTTGTATTAAATT 1403
Query 1309 -------------------------------------------------------------------------- 1308
Sbjct 1404 TGGAAGTGTGGCCCAGAGTTGCTCAGAATTGGAGCAGAGCCTGAGACGTATCTGCAGATCCTGTCATCAGCTGG 1477
Query 1309 -------------------------------------------------------------------------- 1308
Sbjct 1478 CAAGTCCAGGAGACTGTGTCATTTAGAGACTGTGTTGTTAGTTATCCCTCAACATCTTCTAAGGTGGCAGGAAA 1551
Query 1309 -------------------------------------------------------------------------- 1308
Sbjct 1552 TAATATTGGAAATAACATTTTAAAGTAAAAATTTTAAAGTTTAAAGAAGAGTTTTGCCACTTAAACAGGGGAGC 1625
Query 1309 -------------------------------------------------------------------------- 1308
Sbjct 1626 TTTGTCTGGAAAATACACTGAGTTGAAACACTTCATCCTTGGAAGGATTATATAAGATGAACAGTTGTGATAAA 1699
Query 1309 -------------------------------------------------------------------------- 1308
Sbjct 1700 TGTGTAGATTAGAGGGATGTGAATGGGCAGTTAGTCCAGTGCCCTCATTTAAGAGGCCAAGATCCTGATTCAGA 1773
Query 1309 -------------------------------------------------------------------------- 1308
Sbjct 1774 GGAGGCATCCTTTGCCCAGAGCTGCTTAGCTAATCTGACCAAATGTTGGGAAAAATGTCTCACCTAACCCACTA 1847
Query 1309 -------------------------------------------------------------------------- 1308
Sbjct 1848 TTCCTTAATTATGGATTTTGTGAAAAACAATAGAACATGTTAATGAGTAATTTATATTAGTTCGATGTATTACA 1921
Query 1309 -------------------------------------------------------------------------- 1308
Sbjct 1922 ATTTTTTAGCTTTAAATTACAGTTTTCTTATAATGTTGAAATGTTTTAGAATCCTTTGAATCTAAGTATTTGTT 1995
Query 1309 -------------------------------------------------------------------------- 1308
Sbjct 1996 TCCTAAATGAAACATTTGTACAACATTTGATGTTTTTACTTATGAAATATTCTCCTCCCCCAAGAAAATTTAAA 2069
Query 1309 -------------------------------------------------------------------------- 1308
Sbjct 2070 CTTTTTCTCTCTATTTAAAAGCTAAGAAATGTTTTAAAGGAAAAATGAAATTATCTTCCTTTAGCTTATTTTTA 2143
Query 1309 -------------------------------------------------------------------------- 1308
Sbjct 2144 AGGTAAAACAGCTTTTTACTCTGTTATTGTGGTAATGGACAGAATATTACATACAAAAATATTCTGGGAGAGCT 2217
Query 1309 -------------------------------------------------------------------------- 1308
Sbjct 2218 TTTTCCTAGTTGGTTTTAAATCATTGTGCCACCTGAAAGGTTTTTAGATTTTATAGGAGCTAATTTGTCCACCA 2291
Query 1309 -------------------------------------------------------------------------- 1308
Sbjct 2292 GCATTAATGTAACACAGTGTAGTTATGAAAATATATTGAAGGACAGGAAGTGGACACGAAGTGATTTTTGTAAC 2365
Query 1309 -------------------------------------------------------------------------- 1308
Sbjct 2366 CTGAGCAGTTAATGAATGTGCCAACATTTTCTAGGAAGGGACAGCAAGAATATTCTGCTCTGTAGTTAAAATAC 2439
Query 1309 -------------------------------------------------------------------------- 1308
Sbjct 2440 TGGCTGGCTTTTGATGTCTTCATGCTTAATTGTGATCACTTTCTTGCACTGTGATGTTTTTACGTGAATATGTT 2513
Query 1309 -------------------------------------------------------------------------- 1308
Sbjct 2514 GAAGTAGAAGTCTACCATATTATTTTATAAAATGTTTTCTGTATGGCAATAAACTGAAAACATGGATCAACCCT 2587
Query 1309 -------------------------------------------------------------------------- 1308
Sbjct 2588 TCTTTTGAAAATAAACTGAGTCAATTTAGCCTTTTAAAAATATAGTCATCTCTTTTAAATAGAATCCTCTTCCA 2661
Query 1309 -------------------------------------------------------------------------- 1308
Sbjct 2662 CCATCAAGGCTCAACATTTTGTAAGCATCCAAAAAATTGGTAATTAGGGGGCTTGCACTAAATTTCACTATCTT 2735
Query 1309 -------------------------------------------------------------------------- 1308
Sbjct 2736 CAGTAGAGAGGAACTGTTTGGAACTTAGATTTCCAATGTGTATATTCTAATGGAGAAAGCAAGAGGTAGAGTTT 2809
Query 1309 -------------------------------------------------------------------------- 1308
Sbjct 2810 GTATGTTTGACTTACCTTAGATTTTTATTTTCCATACATACTGCAAATGATTGACTTGTTGCATAAATGAAGAT 2883
Query 1309 ------------------------------------------------ 1308
Sbjct 2884 CTTCTGTTGTGTGCTTTTCAAACACTGTAAATAAATTTGAAATTTGAA 2931
