Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_14737
- Subject:
- XR_427093.3
- Aligned Length:
- 3008
- Identities:
- 1308
- Gaps:
- 1700
Alignment
Query 1 -------------------------------------------------------------ATGAGGCTGGCGC 13
|||||||||||||
Sbjct 1 ACTCGGCAGAGGCGCGGGGAAACCTGGCGTACTGGCTGTGGCTTCTCTAGCGGGACTCGGCATGAGGCTGGCGC 74
Query 14 GGCTGCTTCGCGGAGCCGCCTTGGCCGGCCCGGGCCCGGGGCTGCGCGCCGCCGGCTTCAGCCGCAGCTTCAGC 87
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GGCTGCTTCGCGGAGCCGCCTTGGCCGGCCCGGGCCCGGGGCTGCGCGCCGCCGGCTTCAGCCGCAGCTTCAGC 148
Query 88 TCGGACTCGGGCTCCAGCCCGGCGTCCGAGCGCGGCGTTCCGGGCCAGGTGGACTTCTACGCGCGCTTCTCGCC 161
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TCGGACTCGGGCTCCAGCCCGGCGTCCGAGCGCGGCGTTCCGGGCCAGGTGGACTTCTACGCGCGCTTCTCGCC 222
Query 162 GTCCCCGCTCTCCATGAAGCAGTTCCTGGACTTCGGATCAGTGAATGCTTGTGAAAAGACCTCATTTATGTTTC 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GTCCCCGCTCTCCATGAAGCAGTTCCTGGACTTCGGATCAGTGAATGCTTGTGAAAAGACCTCATTTATGTTTC 296
Query 236 TGCGGCAAGAGTTGCCTGTCAGACTGGCAAATATAATGAAAGAAATAAGTCTCCTTCCAGATAATCTTCTCAGG 309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TGCGGCAAGAGTTGCCTGTCAGACTGGCAAATATAATGAAAGAAATAAGTCTCCTTCCAGATAATCTTCTCAGG 370
Query 310 ACACCATCCGTTCAATTGGTACAAAGCTGGTATATCCAGAGTCTTCAGGAGCTTCTTGATTTTAAGGACAAAAG 383
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 ACACCATCCGTTCAATTGGTACAAAGCTGGTATATCCAGAGTCTTCAGGAGCTTCTTGATTTTAAGGACAAAAG 444
Query 384 TGCTGAGGATGCTAAAGCTATTTATGA----------------------------------------------- 410
|||||||||||||||||||||||||||
Sbjct 445 TGCTGAGGATGCTAAAGCTATTTATGAAAGGCCTAGAAGAACATGGTTGCAGGTCTCTAGTTTATGCTGTATGG 518
Query 411 -------------CTTTACAGATACTGTGATACGGATCAGAAACCGACACAATGATGTCATTCCCACAATGGCC 471
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CCTGCAAGATGATCTTTACAGATACTGTGATACGGATCAGAAACCGACACAATGATGTCATTCCCACAATGGCC 592
Query 472 CAGGGTGTGATTGAATACAAGGAGAGCTTTGGGGTGGATCCTGTCACCAGCCAGAATGTTCAGTACTTTTTGGA 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CAGGGTGTGATTGAATACAAGGAGAGCTTTGGGGTGGATCCTGTCACCAGCCAGAATGTTCAGTACTTTTTGGA 666
Query 546 TCGATTCTACATGAGTCGCATTTCAATTAGAATGTTACTCAATCAGCACTCTTTATTGTTTGGTGGAAAAGGCA 619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TCGATTCTACATGAGTCGCATTTCAATTAGAATGTTACTCAATCAGCACTCTTTATTGTTTGGTGGAAAAGGCA 740
Query 620 AAGGAAGTCCATCTCATCGAAAACACATTGGAAGCATAAATCCAAACTGCAATGTACTTGAAGTTATTAAAGAT 693
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 AAGGAAGTCCATCTCATCGAAAACACATTGGAAGCATAAATCCAAACTGCAATGTACTTGAAGTTATTAAAGAT 814
Query 694 GGCTATGAAAATGCTAGGCGTCTGTGTGATTTGTATTATATTAACTCTCCCGAACTAGAACTTGAAGAACTAAA 767
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GGCTATGAAAATGCTAGGCGTCTGTGTGATTTGTATTATATTAACTCTCCCGAACTAGAACTTGAAGAACTAAA 888
Query 768 TGCAAAATCACCAGGACAGCCAATACAAGTGGTTTATGTACCATCCCATCTCTATCACATGGTGTTTGAACTTT 841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TGCAAAATCACCAGGACAGCCAATACAAGTGGTTTATGTACCATCCCATCTCTATCACATGGTGTTTGAACTTT 962
Query 842 TCAAGAATGCAATGAGAGCCACTATGGAACACCATGCCAACAGAGGTGTTTACCCCCCTATTCAAGTTCATGTC 915
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 TCAAGAATGCAATGAGAGCCACTATGGAACACCATGCCAACAGAGGTGTTTACCCCCCTATTCAAGTTCATGTC 1036
Query 916 ACGCTGGGTAATGAGGATTTGACTGTGAAGATGAGTGACCGAGGAGGTGGCGTTCCTTTGAGGAAAATTGACAG 989
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 ACGCTGGGTAATGAGGATTTGACTGTGAAGATGAGTGACCGAGGAGGTGGCGTTCCTTTGAGGAAAATTGACAG 1110
Query 990 ACTTTTCAACTACATGTATTCAACTGCACCAAGACCTCGTGTTGAGACCTCCCGCGCAGTGCCTCTGGCTGGTT 1063
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 ACTTTTCAACTACATGTATTCAACTGCACCAAGACCTCGTGTTGAGACCTCCCGCGCAGTGCCTCTGGCTGGTT 1184
Query 1064 TTGGTTATGGATTGCCCATATCACGTCTTTACGCACAATACTTCCAAGGAGACCTGAAGCTGTATTCCCTAGAG 1137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 TTGGTTATGGATTGCCCATATCACGTCTTTACGCACAATACTTCCAAGGAGACCTGAAGCTGTATTCCCTAGAG 1258
Query 1138 GGTTACGGGACAGATGCAGTTATCTACATTAAGGCTCTGTCAACAGACTCAATAGAAAGACTCCCAGTGTATAA 1211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 GGTTACGGGACAGATGCAGTTATCTACATTAAGGCTCTGTCAACAGACTCAATAGAAAGACTCCCAGTGTATAA 1332
Query 1212 CAAAGCTGCCTGGAAGCATTACAACACCAACCACGAGGCTGATGACTGGTGCGTCCCCAGCAGAGAACCCAAAG 1285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 CAAAGCTGCCTGGAAGCATTACAACACCAACCACGAGGCTGATGACTGGTGCGTCCCCAGCAGAGAACCCAAAG 1406
Query 1286 ACATGACGACGTTCCGCAGTGCC--------------------------------------------------- 1308
|||||||||||||||||||||||
Sbjct 1407 ACATGACGACGTTCCGCAGTGCCTAGACACACTTGGGACATCGGAAAATCCAAATGTGGCTTTTGTATTAAATT 1480
Query 1309 -------------------------------------------------------------------------- 1308
Sbjct 1481 TGGAAGTGTGGCCCAGAGTTGCTCAGAATTGGAGCAGAGCCTGAGACGTATCTGCAGATCCTGTCATCAGCTGG 1554
Query 1309 -------------------------------------------------------------------------- 1308
Sbjct 1555 CAAGTCCAGGAGACTGTGTCATTTAGAGACTGTGTTGTTAGTTATCCCTCAACATCTTCTAAGGTGGCAGGAAA 1628
Query 1309 -------------------------------------------------------------------------- 1308
Sbjct 1629 TAATATTGGAAATAACATTTTAAAGTAAAAATTTTAAAGTTTAAAGAAGAGTTTTGCCACTTAAACAGGGGAGC 1702
Query 1309 -------------------------------------------------------------------------- 1308
Sbjct 1703 TTTGTCTGGAAAATACACTGAGTTGAAACACTTCATCCTTGGAAGGATTATATAAGATGAACAGTTGTGATAAA 1776
Query 1309 -------------------------------------------------------------------------- 1308
Sbjct 1777 TGTGTAGATTAGAGGGATGTGAATGGGCAGTTAGTCCAGTGCCCTCATTTAAGAGGCCAAGATCCTGATTCAGA 1850
Query 1309 -------------------------------------------------------------------------- 1308
Sbjct 1851 GGAGGCATCCTTTGCCCAGAGCTGCTTAGCTAATCTGACCAAATGTTGGGAAAAATGTCTCACCTAACCCACTA 1924
Query 1309 -------------------------------------------------------------------------- 1308
Sbjct 1925 TTCCTTAATTATGGATTTTGTGAAAAACAATAGAACATGTTAATGAGTAATTTATATTAGTTCGATGTATTACA 1998
Query 1309 -------------------------------------------------------------------------- 1308
Sbjct 1999 ATTTTTTAGCTTTAAATTACAGTTTTCTTATAATGTTGAAATGTTTTAGAATCCTTTGAATCTAAGTATTTGTT 2072
Query 1309 -------------------------------------------------------------------------- 1308
Sbjct 2073 TCCTAAATGAAACATTTGTACAACATTTGATGTTTTTACTTATGAAATATTCTCCTCCCCCAAGAAAATTTAAA 2146
Query 1309 -------------------------------------------------------------------------- 1308
Sbjct 2147 CTTTTTCTCTCTATTTAAAAGCTAAGAAATGTTTTAAAGGAAAAATGAAATTATCTTCCTTTAGCTTATTTTTA 2220
Query 1309 -------------------------------------------------------------------------- 1308
Sbjct 2221 AGGTAAAACAGCTTTTTACTCTGTTATTGTGGTAATGGACAGAATATTACATACAAAAATATTCTGGGAGAGCT 2294
Query 1309 -------------------------------------------------------------------------- 1308
Sbjct 2295 TTTTCCTAGTTGGTTTTAAATCATTGTGCCACCTGAAAGGTTTTTAGATTTTATAGGAGCTAATTTGTCCACCA 2368
Query 1309 -------------------------------------------------------------------------- 1308
Sbjct 2369 GCATTAATGTAACACAGTGTAGTTATGAAAATATATTGAAGGACAGGAAGTGGACACGAAGTGATTTTTGTAAC 2442
Query 1309 -------------------------------------------------------------------------- 1308
Sbjct 2443 CTGAGCAGTTAATGAATGTGCCAACATTTTCTAGGAAGGGACAGCAAGAATATTCTGCTCTGTAGTTAAAATAC 2516
Query 1309 -------------------------------------------------------------------------- 1308
Sbjct 2517 TGGCTGGCTTTTGATGTCTTCATGCTTAATTGTGATCACTTTCTTGCACTGTGATGTTTTTACGTGAATATGTT 2590
Query 1309 -------------------------------------------------------------------------- 1308
Sbjct 2591 GAAGTAGAAGTCTACCATATTATTTTATAAAATGTTTTCTGTATGGCAATAAACTGAAAACATGGATCAACCCT 2664
Query 1309 -------------------------------------------------------------------------- 1308
Sbjct 2665 TCTTTTGAAAATAAACTGAGTCAATTTAGCCTTTTAAAAATATAGTCATCTCTTTTAAATAGAATCCTCTTCCA 2738
Query 1309 -------------------------------------------------------------------------- 1308
Sbjct 2739 CCATCAAGGCTCAACATTTTGTAAGCATCCAAAAAATTGGTAATTAGGGGGCTTGCACTAAATTTCACTATCTT 2812
Query 1309 -------------------------------------------------------------------------- 1308
Sbjct 2813 CAGTAGAGAGGAACTGTTTGGAACTTAGATTTCCAATGTGTATATTCTAATGGAGAAAGCAAGAGGTAGAGTTT 2886
Query 1309 -------------------------------------------------------------------------- 1308
Sbjct 2887 GTATGTTTGACTTACCTTAGATTTTTATTTTCCATACATACTGCAAATGATTGACTTGTTGCATAAATGAAGAT 2960
Query 1309 ------------------------------------------------ 1308
Sbjct 2961 CTTCTGTTGTGTGCTTTTCAAACACTGTAAATAAATTTGAAATTTGAA 3008
