Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_14833
• Subject: XM_017314791.1
• Aligned Length: 1365
• Identities: 756
• Gaps: 528

Alignment

Query    1  ATGAGGCGACGAAGGAGGCGGGACGGCTTTTACCCAGCCCCGGACTTCCGAGACAGGGAAGCTGAGGACATGGC  74
            ||||||||||||.|||||||||||||||||||||.|||.||.|||||||||.||||||||||||||||||||||
Sbjct    1  ATGAGGCGACGACGGAGGCGGGACGGCTTTTACCTAGCGCCTGACTTCCGACACAGGGAAGCTGAGGACATGGC  74

Query   75  AGGAGTGTTTGACATAGACCTGGACCAGCCAGAGGACGCGGGCTCTGAGGATGAGCTGGAGGAGGGGGGTCAGT  148
            |||||||||||||||||||||||||||||||||.||.||.||||||||||||||||||||||||||||||||||
Sbjct   75  AGGAGTGTTTGACATAGACCTGGACCAGCCAGAAGATGCAGGCTCTGAGGATGAGCTGGAGGAGGGGGGTCAGT  148

Query  149  TAAATGAAAGCATGGACCATGGGGGAGTTGGACCATATGAACTTGGCATGGAACATTGTGAGAAATTTGAAATC  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  TAAATGAAAGCATGGACCATGGGGGAGTTGGACCATATGAACTTGGCATGGAACATTGTGAGAAATTTGAAATC  222

Query  223  TCAGAAACTAGTGTGAACAGAGGGCCAGAAAAAATCAGACCAGAATGTTTTGAGCTACTTCGGGTACTTGGTAA  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  TCAGAAACTAGTGTGAACAGAGGGCCAGAAAAAATCAGACCAGAATGTTTTGAGCTACTTCGGGTACTTGGTAA  296

Query  297  AGGGGGCTATGGAAAGGTTTTTCAAGTACGAAAAGTAACAGGAGCAAATACTGGGAAAATATTTGCCATGAAGG  370
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||
Sbjct  297  AGGGGGCTATGGAAAGGTTTTTCAAGTACGAAAAGTAACAGGAGCAAATACTGGGAAGATATTTGCCATGAAGG  370

Query  371  TGCTTAAAAAGGCAATGATAGTAAGAAATGCTAAAGATACAGCTCATACAAAAGCAGAACGGAATATTCTGGAG  444
            ||||||||||||||||||||||.||.||||||||.||.||.||.||.||.||||||||.|||||.|||||||||
Sbjct  371  TGCTTAAAAAGGCAATGATAGTGAGGAATGCTAAGGACACGGCCCACACGAAAGCAGAGCGGAACATTCTGGAG  444

Query  445  GAAGTAAAGCATCCCTTCATCGTGGATTTAATTTATGCCTTTCAGACTGGTGGAAAACTCTACCTCATCCTTGA  518
            |||||.||.||.||.|||||.|||||..|.|||||||||||||||||.||.|||||.||||||||||||||.||
Sbjct  445  GAAGTGAAACACCCTTTCATTGTGGACCTGATTTATGCCTTTCAGACCGGAGGAAAGCTCTACCTCATCCTCGA  518

Query  519  GTATCTCAGTGGAGGAGAACTATTTATGCAGTTAGAAAGAGAGGGAATATTTATGGAAGACACTGCCTGCTTTT  592
            |||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||.|         
Sbjct  519  GTATCTCAGTGGAGGAGAACTATTTATGCAGTTAGAAAGAGAGGGAATATTCATGGAAGACACAG---------  583

Query  593  ACTTGGCAGAAATCTCCATGGCTTTGGGGCATTTACATCAAAAGGGGATC-ATCTACAGAGACCTGAAGCCGGA  665
                            |.||||.||||                |.|||.| .|||.||           |.|.|
Sbjct  584  ----------------CGTGGCCTTGG----------------GTGGACCGCTCTTCA-----------CTGCA  614

Query  666  GAATATCATGCTTAATCACCAAGGTCATGTGAAACTAACAGACTTTGGACTATGCAAAGAATCTATTCATGATG  739
            ||||.||.|                    ||||           ||||.||.|        ||||         
Sbjct  615  GAATTTCCT--------------------TGAA-----------TTGGCCTTT--------TCTA---------  640

Query  740  GAACAGTCACACACA-----CATTTTGTGGAACAATAGAATACATGGCCCCTGAAATCTTGATGAGAAGTGGCC  808
                    |||||.|     |||||        ||.||           |||    |...|||  ||||||.||
Sbjct  641  --------ACACAGAAGCTGCATTT--------AAGAG-----------CCT----TAGGGAT--GAAGTGCCC  681

Query  809  ACAATCGTGCTGTGGATTGGTGGAG--TTTGGGAGCATTAATGTATGACATGCTGACTGGAGCACCCCCATTCA  880
                     ||.|   ||||.||||  |.|..||||            |.||     |||||           .
Sbjct  682  ---------CTTT---TTGGAGGAGGCTCTCTGAGC------------CCTG-----TGGAG-----------G  715

Query  881  CTGGGGAGAATAGAAAGAAAACAATTGACAAAATCCTCAAATGTAAACTCAATTTGCCTCCCTACCTCACACAA  954
            |||.||                           ||                                       
Sbjct  716  CTGTGG---------------------------TC---------------------------------------  723

Query  955  GAAGCCAGAGATCTGCTTAAAAAGCTGCTGAAAAGAAATGCTGCTTCTCGTCTGGGAGCTGGTCCTGGGGACGC  1028
                        |||||     ||||| |||||       ||||.||             .|||||       |
Sbjct  724  ------------CTGCT-----AGCTG-TGAAA-------CTGCCTC-------------AGTCCT-------C  752

Query 1029  TGGAGAAGTTCAAGCTCATCCATTCTTTAGACACATTAACTGGGAAGAACTTCTGGCTCGAAAGGTGGAGCCCC  1102
            |.|                          ||||||                                   |||.
Sbjct  753  TAG--------------------------GACACA-----------------------------------CCCT  765

Query 1103  CCTTTAAACCTCTGTTGCAATCTGAAGAGGATGTAAGTCAGTTTGATTCCAA----GTTTACACGTCAGACACC  1172
            ||.|      .|||..|.||||||.||                 ||||.|||    | ||||            
Sbjct  766  CCAT------CCTGGAGTAATCTGCAG-----------------GATTGCAACATTG-TTAC------------  803

Query 1173  TGTCGACAGCCCAGATGACTCAACTCTCAGTGAAAGTGCCAATCAGGTCTTTCTGGGTTTTACATATGTGGCTC  1246
                 |||||                 ||||   |.||     |||..||||.||..|||        .|..||
Sbjct  804  -----ACAGC-----------------CAGT---ATTG-----CAGTGCTTTGTGCTTTT--------CGAATC  839

Query 1247  CATCTGTACTTGAAAGTGTGAAAGAAAAGTTTTCCTTTGAACCAAAAATCCGATCACCTCGAAGATTTATTGGC  1320
            ||         ||.||.||                                                       
Sbjct  840  CA---------GACAGGGT-------------------------------------------------------  849

Query 1321  AGCCCACGAACACCTGTCAGTACTGCTATGTGC  1353
                                             
Sbjct  850  ---------------------------------  849