Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_14845
Subject:
NM_009271.3
Aligned Length:
1630
Identities:
1452
Gaps:
29

Alignment

Query    1  ATGGGTAGCAACAAGAGCAAGCCCAAGGATGCCAGCCAGCGGCGCCGCAGCCTGGAGCCCGCCGAGAACGTGCA  74
            |||||.|||||||||||||||||||||||.||||||||||||||||||||||||||||||.|.||.||||||||
Sbjct    1  ATGGGCAGCAACAAGAGCAAGCCCAAGGACGCCAGCCAGCGGCGCCGCAGCCTGGAGCCCTCGGAAAACGTGCA  74

Query   75  CGGCGCTGGC-GGGGGCGCTTTCCCCGCCTCGCAGACCCCCAGCAAGCCAGCCTCGGCCGACGGCCACCGCGGC  147
            |||    ||| ||||||||.|||||.|||||.|||||.||.||||||||.|||||.|||||||||||||||||.
Sbjct   75  CGG----GGCAGGGGGCGCCTTCCCGGCCTCACAGACACCGAGCAAGCCCGCCTCCGCCGACGGCCACCGCGGG  144

Query  148  CCCAGCGCGGCCTTCG---CCCCCGCGGCCGCCGAGCCCAAGCTGTTCGGAGGCTTCAACTCCTCGGACACCGT  218
            ||||||||.|||||||   |.||||||   ||||||||||||||.|||||||||||||||||||||||||||||
Sbjct  145  CCCAGCGCCGCCTTCGTGCCGCCCGCG---GCCGAGCCCAAGCTCTTCGGAGGCTTCAACTCCTCGGACACCGT  215

Query  219  CACCTCCCCGCAGAGGGCGGGCCCGCTGGCCGGTGGAGTGACCACCTTTGTGGCCCTCTATGACTATGAGTCTA  292
            |||||||||||||||||||||.||.|||||.|||||.|||||||||||||||||||||||||||||||||||..
Sbjct  216  CACCTCCCCGCAGAGGGCGGGGCCTCTGGCAGGTGGGGTGACCACCTTTGTGGCCCTCTATGACTATGAGTCAC  289

Query  293  GGACGGAGACAGACCTGTCCTTCAAGAAAGGCGAGCGGCTCCAGATTGTCAACAACAC----------------  350
            ||||.|||||.||||||||||||||||||||.||||||||.|||||||||||.|||||                
Sbjct  290  GGACAGAGACTGACCTGTCCTTCAAGAAAGGGGAGCGGCTGCAGATTGTCAATAACACGAGGAAGGTGGATGTC  363

Query  351  --AGAGGGAGACTGGTGGCTGGCCCACTCGCTCAGCACAGGACAGACAGGCTACATCCCCAGCAACTACGTGGC  422
              |||||||||||||||||||||.||||||||.|||||.||||||||.||.|||||||||||||||||.|||||
Sbjct  364  AGAGAGGGAGACTGGTGGCTGGCACACTCGCTGAGCACGGGACAGACCGGTTACATCCCCAGCAACTATGTGGC  437

Query  423  GCCCTCCGACTCCATCCAGGCTGAGGAGTGGTATTTTGGCAAGATCACCAGACGGGAGTCAGAGCGGTTACTGC  496
            |||||||||||||||||||||||||||||||||.||||||||||||||.||||||||.|||||||||.|.||||
Sbjct  438  GCCCTCCGACTCCATCCAGGCTGAGGAGTGGTACTTTGGCAAGATCACTAGACGGGAATCAGAGCGGCTGCTGC  511

Query  497  TCAATGCAGAGAACCCGAGAGGGACCTTCCTCGTGCGAGAAAGTGAGACCACGAAAGGTGCCTACTGCCTCTCA  570
            ||||.||.|||||||||||||||||||||||||||.|.||.|||||||||||.||||||||||||||||||||.
Sbjct  512  TCAACGCCGAGAACCCGAGAGGGACCTTCCTCGTGAGGGAGAGTGAGACCACAAAAGGTGCCTACTGCCTCTCT  585

Query  571  GTGTCTGACTTCGACAACGCCAAGGGCCTCAACGTGAAGCACTACAAGATCCGCAAGCTGGACAGCGGCGGCTT  644
            ||.||.|||||||||||.|||||||||||.||.|||||.||||||||||||||||||||||||||||||||.||
Sbjct  586  GTATCCGACTTCGACAATGCCAAGGGCCTAAATGTGAAACACTACAAGATCCGCAAGCTGGACAGCGGCGGTTT  659

Query  645  CTACATCACCTCCCGCACCCAGTTCAACAGCCTGCAGCAGCTGGTGGCCTACTACTCCAAACACGCCGATGGCC  718
            ||||||||||||||||||||||||||||||||||||||||||.|||||.||||||||||||||.||.|||||||
Sbjct  660  CTACATCACCTCCCGCACCCAGTTCAACAGCCTGCAGCAGCTCGTGGCTTACTACTCCAAACATGCTGATGGCC  733

Query  719  TGTGCCACCGCCTCACCACCGTGTGCCCCACGTCCAAGCCGCAGACTCAGGGCCTGGCCAAGGATGCCTGGGAG  792
            ||||.|||||||||||.|||||.||.|||||.||||||||.|||||.|||||..|||||||||||||.||||||
Sbjct  734  TGTGTCACCGCCTCACTACCGTATGTCCCACATCCAAGCCTCAGACCCAGGGATTGGCCAAGGATGCGTGGGAG  807

Query  793  ATCCCTCGGGAGTCGCTGCGGCTGGAGGTCAAGCTGGGCCAGGGCTGCTTTGGCGAGGTGTGGATGGGGACCTG  866
            |||||.||||||||.|||||||||||||||||||||||||||||.|||||.||.||||||||||||||||||||
Sbjct  808  ATCCCCCGGGAGTCCCTGCGGCTGGAGGTCAAGCTGGGCCAGGGTTGCTTCGGAGAGGTGTGGATGGGGACCTG  881

Query  867  GAACGGTACCACCAGGGTGGCCATCAAAACCCTGAAGCCTGGCACGATGTCTCCAGAGGCCTTCCTGCAGGAGG  940
            ||||||.|||||.|||||.|||||||||||.||||||||.|||||.|||||.||||||||||||||||||||||
Sbjct  882  GAACGGCACCACGAGGGTTGCCATCAAAACTCTGAAGCCAGGCACCATGTCCCCAGAGGCCTTCCTGCAGGAGG  955

Query  941  CCCAGGTCATGAAGAAGCTGAGGCATGAGAAGCTGGTGCAGTTGTATGCTGTGGTTTCAGAGGAGCCCATTTAC  1014
            ||||.|||||||||||.||||||||.|||||.|||||||||.|||||||||||||.||.||.||.|||||||||
Sbjct  956  CCCAAGTCATGAAGAAACTGAGGCACGAGAAACTGGTGCAGCTGTATGCTGTGGTGTCGGAAGAACCCATTTAC  1029

Query 1015  ATCGTCACGGAGTACATGAGCAAGGGGAGTTTGCTGGACTTTCTCAAGGGGGAGACAGGCAAGTACCTGCGGCT  1088
            ||.||.||.||||||||||.||||||||||.||||||||||||||||||||||.||.|||||.||..|||||||
Sbjct 1030  ATTGTGACAGAGTACATGAACAAGGGGAGTCTGCTGGACTTTCTCAAGGGGGAAACGGGCAAATATTTGCGGCT  1103

Query 1089  GCCTCAGCTGGTGGACATGGCTGCTCAGATCGCCTCAGGCATGGCGTACGTGGAGCGGATGAACTACGTCCACC  1162
            .||.|||||||||||||||.|||||||||||||.|||||||||||.||.|||||||||||||||||.||.||||
Sbjct 1104  ACCCCAGCTGGTGGACATGTCTGCTCAGATCGCTTCAGGCATGGCCTATGTGGAGCGGATGAACTATGTGCACC  1177

Query 1163  GGGACCTTCGTGCAGCCAACATCCTGGTGGGAGAGAACCTGGTGTGCAAAGTGGCCGACTTTGGGCTGGCTCGG  1236
            ||||||||||.||.|||||.|||||.||.||.|||||||||||||||||||||||||||||||||.||||.|||
Sbjct 1178  GGGACCTTCGAGCCGCCAATATCCTAGTAGGGGAGAACCTGGTGTGCAAAGTGGCCGACTTTGGGTTGGCCCGG  1251

Query 1237  CTCATTGAAGACAATGAGTACACGGCGCGGCAAGGTGCCAAATTCCCCATCAAGTGGACGGCTCCAGAAGCTGC  1310
            |||||.||||||||.||.|||||.||.||||||||||||||||||||||||||||||||.||.||.||||||||
Sbjct 1252  CTCATAGAAGACAACGAATACACAGCCCGGCAAGGTGCCAAATTCCCCATCAAGTGGACCGCCCCTGAAGCTGC  1325

Query 1311  CCTCTATGGCCGCTTCACCATCAAGTCGGACGTGTGGTCCTTCGGGATCCTGCTGACTGAGCTCACCACAAAGG  1384
            .||.||.|||.|.|||||||||||||||||.|||||||||||.|||||.||||||||.|||||||||||.||||
Sbjct 1326  TCTGTACGGCAGGTTCACCATCAAGTCGGATGTGTGGTCCTTTGGGATTCTGCTGACCGAGCTCACCACTAAGG  1399

Query 1385  GACGGGTGCCCTACCCTGGGATGGTGAACCGCGAGGTGCTGGACCAGGTGGAGCGGGGCTACCGGATGCCCTGC  1458
            ||.|.||||||||.|||||||||||||||||.|||||.||||||||||||||||||||||||||||||||.||.
Sbjct 1400  GAAGAGTGCCCTATCCTGGGATGGTGAACCGTGAGGTTCTGGACCAGGTGGAGCGGGGCTACCGGATGCCTTGT  1473

Query 1459  CCGCCGGAGTGTCCCGAGTCCCTGCACGACCTCATGTGCCAGTGCTGGCGGAAGGAGCCTGAGGAGCGGCCCAC  1532
            ||.||.|||||.||||||||||||||.|||||.||||||||||||||||||||||||||.||||||||||||||
Sbjct 1474  CCCCCCGAGTGCCCCGAGTCCCTGCATGACCTTATGTGCCAGTGCTGGCGGAAGGAGCCCGAGGAGCGGCCCAC  1547

Query 1533  CTTCGAGTACCTGCAGGCCTTCCTGGAGGACTACTTCACGTCCACCGAGCCCCAGTACCAGCCCGGGGAGAACC  1606
            |||||||||||||||||||||||||||.||||||||.||||||||.|||||.||||||||||||||||||||||
Sbjct 1548  CTTCGAGTACCTGCAGGCCTTCCTGGAAGACTACTTTACGTCCACTGAGCCACAGTACCAGCCCGGGGAGAACC  1621

Query 1607  TC  1608
            |.
Sbjct 1622  TA  1623

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