Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_14983
- Subject:
- NM_024318.4
- Aligned Length:
- 1820
- Identities:
- 1196
- Gaps:
- 427
Alignment
Query 1 ATGACCCTCACCCTCTCAGTCCTGATTTGCCTCGGGCTGAGTGTGGGCCCCAGGACCTGCGTGCAGGCAGGCAC 74
|||||||.|||||||.|||.||||.|.|||||.|||||||||.||||||||||||||..||||||||||||..|
Sbjct 1 ATGACCCCCACCCTCGCAGCCCTGCTCTGCCTAGGGCTGAGTCTGGGCCCCAGGACCCACGTGCAGGCAGGGCC 74
Query 75 CCTCCCCAAACCCACCCTCTGGGCTGAGCCAGCCTCTGTGAT-AGCTCGGGGGAAGCCCGTGACCCTCTGGTGT 147
|.||||||||||||||||||||||||||||||.||||||||| |||| ||||||..|||||||||.||||||||
Sbjct 75 CTTCCCCAAACCCACCCTCTGGGCTGAGCCAGGCTCTGTGATCAGCT-GGGGGAGCCCCGTGACCATCTGGTGT 147
Query 148 CAGGGGCCCCTGGAGACTGAGGAGTACCGTCTGGATAAGGAGGGACTCCCATGGGCCC-GGAAGAGACAGAACC 220
||||||..|||||||.|..||||||||||.||||||||.||||||..|||| |.|||| ||.|.|||.|.||||
Sbjct 148 CAGGGGAGCCTGGAGGCCCAGGAGTACCGACTGGATAAAGAGGGAAGCCCA-GAGCCCTGGGACAGAAATAACC 220
Query 221 CACTGGAGCCTGGAGC-----CAAGGCCAAGTTCCACATTCCATCCACGGTGTATGACAG-------TGCAGGG 282
|||||||.|| | ||||||||..|||..|||.|||||| ||.|||| |||.|||
Sbjct 221 CACTGGAACC-----CAAGAACAAGGCCAGATTCTCCATCCCATCC-------ATAACAGAGCACCATGCGGGG 282
Query 283 CGATACCGCTGCTACTATGAGACCCCTGCAGGCTGGTCAGAGCCCAGTGACCCCCTGGAGCTGGTGGCGACAGG 356
.|||||||||||.|||||.|.|.|.||||||||||||||||||||||.||||||||||||||||||..||||||
Sbjct 283 AGATACCGCTGCCACTATTACAGCTCTGCAGGCTGGTCAGAGCCCAGCGACCCCCTGGAGCTGGTGATGACAGG 356
Query 357 ATTCTAT-GCAGAACCCACTCTTTTAGCCCTGCCGAGTCCTGTGGTGGCCTCAGGAGGAAATGTGACCCTCCAG 429
|..|||| ||| |||||||.||.|.|||||||||.||.|||||||||||||||||.||.|||.||||||||||.
Sbjct 357 AGCCTATAGCA-AACCCACCCTCTCAGCCCTGCCCAGCCCTGTGGTGGCCTCAGGGGGGAATATGACCCTCCAA 429
Query 430 TGTGATACACTGGACGGACTTCTCAC--GTTTGTTCTTGTTG-AGGA---AGAACAGAAGCTCCCCAGGACCCT 497
||||...|||.|.|.||| |.|||| .||||||| ||.|| |||| ||||||..||||||||.|||||||
Sbjct 430 TGTGGCTCACAGAAGGGA--TATCACCATTTTGTTC-TGATGAAGGAAGGAGAACACCAGCTCCCCCGGACCCT 500
Query 498 GTACTCACAGAAGCTCCCCAAAGGGCCATCCCAGGCCCTGTTCCCTGTGGGTCCCGTGACCCCCAGCTGCAGGT 571
|.||||||||.||||||.||..|||...|.|||||||||||||||||||||.|||||||.|||||||..|||||
Sbjct 501 GGACTCACAGCAGCTCCACAGTGGGGGGTTCCAGGCCCTGTTCCCTGTGGGCCCCGTGAACCCCAGCCACAGGT 574
Query 572 GGAGGTTCAGATGCTATTACTATTACAGGAAAAACCCTCAGGTGTGGTCGAACCCCAGTGACCTCCTGGAGATT 645
|||||||||.|||||||||||||||.|.|||.|.|||.|.|||||||||..||||||||||||.||||||||||
Sbjct 575 GGAGGTTCACATGCTATTACTATTATATGAACACCCCCCGGGTGTGGTCCCACCCCAGTGACCCCCTGGAGATT 648
Query 646 CTGGTCCCAGGCGTGTCTAGGAAGCCCTCCCTCCTGATCCCGCAGGGCTCTGTCGTGGCCCGCGGAGGC--AGC 717
|||..|.||||||||||||||||||||||||||||||.||.|||||||.|||||.||||||..| ||| |||
Sbjct 649 CTGCCCTCAGGCGTGTCTAGGAAGCCCTCCCTCCTGACCCTGCAGGGCCCTGTCCTGGCCCCTG--GGCAGAGC 720
Query 718 CTGACCCTGCAGTGTCGCTCTGATGTCGGCTATGACATATTCGTTCTGTACAAGGAGGGGGAACATGACCTCGT 791
||||||||.||||||.||||||||||||||||.||||.|||.||||||||.|||||||||||||.||||.||.|
Sbjct 721 CTGACCCTCCAGTGTGGCTCTGATGTCGGCTACGACAGATTTGTTCTGTATAAGGAGGGGGAACGTGACTTCCT 794
Query 792 CCAGGGCTCTGGCCAGCAGCCCCAGGCTGGGCTCTCCCAGGCCAACTTCACCCTGGGCCCTGTGAGCCGCTCCC 865
||||.||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||
Sbjct 795 CCAGCGCCCTGGCCAGCAGCCCCAGGCTGGGCTCTCCCAGGCCAACTTCACCCTGGGCCCTGTGAGCCCCTCCC 868
Query 866 ACGGGGGCCAGTACAGATGCTACGGTGCACACAACCTCTCC-CCTAGGTGGTCGGCCCCCAGCGACCCCCTGGC 938
||||||||||||||||.|||||.|||||||||||||||||| ||.| |||||||||||||||||||||||||..
Sbjct 869 ACGGGGGCCAGTACAGGTGCTATGGTGCACACAACCTCTCCTCCGA-GTGGTCGGCCCCCAGCGACCCCCTGAA 941
Query 939 CATCCTGATCGCAGGACTGATCCCTGACATACCCG---CCCTCTCGGTGCAGCCGGGCCCCAAGGTGGCCTCAG 1009
|||||||||.|||||||.||||..||||| ||| ||||.||.|..|||||||||||||..||||||||||
Sbjct 942 CATCCTGATGGCAGGACAGATCTATGACA---CCGTCTCCCTGTCAGCACAGCCGGGCCCCACAGTGGCCTCAG 1012
Query 1010 GAGAGAACGTGACCCTGCTGTGTCAGTCATGGCATCAGATAGACACTTTCTTTTTGACCAAGGAGGGGGCAGCC 1083
||||||||||||||||||||||||||||||||...|||.|.|||||||||.||.|||||||.||.|||||||||
Sbjct 1013 GAGAGAACGTGACCCTGCTGTGTCAGTCATGGTGGCAGTTTGACACTTTCCTTCTGACCAAAGAAGGGGCAGCC 1086
Query 1084 CATCCCCCGCTGTGTCTAAAGTCAAAGTAC-CAGTCTTATAGACACCAGGCTGAATTCTCCATGAGTCCTGTGA 1156
||||||||.|||.||||.|..||||.|||| .|| ||.|||...||||||||||||||.|||||||||||||||
Sbjct 1087 CATCCCCCACTGCGTCTGAGATCAATGTACGGAG-CTCATAAGTACCAGGCTGAATTCCCCATGAGTCCTGTGA 1159
Query 1157 CCTCAGCCCAGGGTGGAACCTACCGATGCTACAGCGCAATCAGGTCCTACCCCTACCTGCTGTCCAGCCCTAGT 1230
||||||||||.|..||.||||||.|.||||||.||.||..|||.|||.|||||.||||||||||...|||.|||
Sbjct 1160 CCTCAGCCCACGCGGGGACCTACAGGTGCTACGGCTCATACAGCTCCAACCCCCACCTGCTGTCTTTCCCCAGT 1233
Query 1231 TACCCCCAGGAGCTCGTGGTCTCAGGACCCTCTGG-GGATCCCAGCCTCTCACCTACAGGCTCCACCC-CCACA 1302
.|.||||.|||.|||.||||||||||||.|||||| ||.| ||||||||.||||.||||| .||.||| |||||
Sbjct 1234 GAGCCCCTGGAACTCATGGTCTCAGGACACTCTGGAGGCT-CCAGCCTCCCACCCACAGG-GCCGCCCTCCACA 1305
Query 1303 CCTGGCCCTGAGGACCAGCCCCTCAC-CCCCACGGGGTTGGATCCCCAGAGTGG----TCTGGGAAGGCA---- 1367
|||| |||||| |.|||.||..| .||.||||| ||| ||
Sbjct 1306 CCTG----------------CCTCACACGCCAAGGATT-------ACACAGTGGAGAATCT-------CATCCG 1349
Query 1368 CCTGGGGGTTGTGACTGGGGTCTCAGTGGC---CTTCGTCCTGCTGCTGTTCCTC---CTCCTCTTCCTCCTCC 1435
|.|||| || |||| |||.||| |||.|||||||| .|.||.||
Sbjct 1350 CATGGG-----------------CA-TGGCAGGCTTGGTC---CTGGTGTTCCTCGGGATTCTGTT-------- 1394
Query 1436 TCCGACATCGGCATCAGAGCAAACACAGGACATCGGCCCATTTCTACCGTCCTGCAGGGGCTGCGGGGCCAGAG 1509
||..||| .|.|||.||| |||||||
Sbjct 1395 ------------ATTTGAG---GCTCAGCACA-----------------------------------GCCAGAG 1418
Query 1510 -----CCCAAGGACCAGGGCCTGCAGAAGAGGGCCAGCCCAGTTGCTGACATCCAGGAGGAAATTCTCAATGCT 1578
|||||| .||||| ||.|||||
Sbjct 1419 AAACCCCCAAG---------ATGCAG--------------------------CCGGGAGG-------------- 1443
Query 1579 GCCGTGAAGGACACACAGCCCAAGGACGGGGTGGAGATGGATGCTCGGGCTGCTGCATCTGAAGCCCCCCAGGA 1652
Sbjct 1444 -------------------------------------------------------------------------- 1443
Query 1653 TGTGACCTACGCCCAGCTACACAGCTTGACCCTCAGACGGGAGGCAACTGAGCCTCCTCCATCCCAGGAAAGGG 1726
Sbjct 1444 -------------------------------------------------------------------------- 1443
Query 1727 AACCTCCAGCTGAACCCAGCATCTACGCCCCCCTGGCCATCCAC 1770
Sbjct 1444 -------------------------------------------- 1443
