Construct: ORF ccsbBroadEn_14983

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF002955.1_s300c1, BRDN0000396643
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
LILRB5 (10990)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 10990 LILRB5 leukocyte immunoglobulin li... NM_006840.5 99.8% 99.6% 938A>C;1625C>G;1671G>A
2 human 10990 LILRB5 leukocyte immunoglobulin li... NM_001081442.3 99.6% 99.4% (many diffs)
3 human 10990 LILRB5 leukocyte immunoglobulin li... XM_011526360.2 88% 87.8% (many diffs)
4 human 10990 LILRB5 leukocyte immunoglobulin li... XM_011526359.2 87.9% 87.7% (many diffs)
5 human 10990 LILRB5 leukocyte immunoglobulin li... NM_001304457.2 86.5% 86.4% (many diffs)
6 human 10990 LILRB5 leukocyte immunoglobulin li... XM_011526361.2 85.6% 85.5% (many diffs)
7 human 10990 LILRB5 leukocyte immunoglobulin li... NM_001081443.3 82.7% 82.5% (many diffs)
8 human 102725035 LOC102725035 leukocyte immunoglobulin-li... XM_011548575.3 76.5% 66.3% (many diffs)
9 human 102725035 LOC102725035 leukocyte immunoglobulin-li... XM_011548574.3 76.4% 66.2% (many diffs)
10 human 102725035 LOC102725035 leukocyte immunoglobulin-li... XM_006726314.4 74.7% 64.7% (many diffs)
11 human 102725035 LOC102725035 leukocyte immunoglobulin-li... XM_006726313.4 74.6% 64.6% (many diffs)
12 human 107987462 LOC107987462 leukocyte immunoglobulin-li... XM_017030297.1 74.5% 63.8% (many diffs)
13 human 107987462 LOC107987462 leukocyte immunoglobulin-li... XM_017030296.1 74.4% 63.7% (many diffs)
14 human 107987425 LOC107987425 leukocyte immunoglobulin-li... XM_006726280.2 74.3% 64.1% (many diffs)
15 human 11025 LILRB3 leukocyte immunoglobulin li... NM_006864.4 74.2% 63.8% (many diffs)
16 human 107987425 LOC107987425 leukocyte immunoglobulin-li... XM_006726278.2 74.2% 64% (many diffs)
17 human 11025 LILRB3 leukocyte immunoglobulin li... NM_001081450.3 74.1% 63.7% (many diffs)
18 human 10990 LILRB5 leukocyte immunoglobulin li... XM_011526362.2 72.9% 72.8% (many diffs)
19 human 10990 LILRB5 leukocyte immunoglobulin li... XR_935723.1 70.3% (many diffs)
20 human 10990 LILRB5 leukocyte immunoglobulin li... XR_935722.1 70.2% (many diffs)
21 human 11025 LILRB3 leukocyte immunoglobulin li... XM_024451332.1 66.5% 57% (many diffs)
22 human 102725035 LOC102725035 leukocyte immunoglobulin-li... XR_001756785.2 63.8% (many diffs)
23 human 107987425 LOC107987425 leukocyte immunoglobulin-li... XR_952182.3 63.4% (many diffs)
24 human 107987462 LOC107987462 leukocyte immunoglobulin-li... XR_001756804.1 62.8% (many diffs)
25 human 107987441 LOC107987441 leukocyte immunoglobulin-li... XM_017030292.1 26.1% 22.4% (many diffs)
26 human 112268334 LOC112268334 leukocyte immunoglobulin-li... XM_024452538.1 26.1% 22.4% (many diffs)
27 human 112268336 LOC112268336 leukocyte immunoglobulin-li... XM_024452546.1 26.1% 22.4% (many diffs)
28 human 112268337 LOC112268337 leukocyte immunoglobulin-li... XM_024452551.1 26.1% 22.4% (many diffs)
29 human 112268340 LOC112268340 leukocyte immunoglobulin-li... XM_024452562.1 26.1% 22.4% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1836
ORF length:
1770
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGAC CCTCACCCTC TCAGTCCTGA TTTGCCTCGG GCTGAGTGTG GGCCCCAGGA
121CCTGCGTGCA GGCAGGCACC CTCCCCAAAC CCACCCTCTG GGCTGAGCCA GCCTCTGTGA
181TAGCTCGGGG GAAGCCCGTG ACCCTCTGGT GTCAGGGGCC CCTGGAGACT GAGGAGTACC
241GTCTGGATAA GGAGGGACTC CCATGGGCCC GGAAGAGACA GAACCCACTG GAGCCTGGAG
301CCAAGGCCAA GTTCCACATT CCATCCACGG TGTATGACAG TGCAGGGCGA TACCGCTGCT
361ACTATGAGAC CCCTGCAGGC TGGTCAGAGC CCAGTGACCC CCTGGAGCTG GTGGCGACAG
421GATTCTATGC AGAACCCACT CTTTTAGCCC TGCCGAGTCC TGTGGTGGCC TCAGGAGGAA
481ATGTGACCCT CCAGTGTGAT ACACTGGACG GACTTCTCAC GTTTGTTCTT GTTGAGGAAG
541AACAGAAGCT CCCCAGGACC CTGTACTCAC AGAAGCTCCC CAAAGGGCCA TCCCAGGCCC
601TGTTCCCTGT GGGTCCCGTG ACCCCCAGCT GCAGGTGGAG GTTCAGATGC TATTACTATT
661ACAGGAAAAA CCCTCAGGTG TGGTCGAACC CCAGTGACCT CCTGGAGATT CTGGTCCCAG
721GCGTGTCTAG GAAGCCCTCC CTCCTGATCC CGCAGGGCTC TGTCGTGGCC CGCGGAGGCA
781GCCTGACCCT GCAGTGTCGC TCTGATGTCG GCTATGACAT ATTCGTTCTG TACAAGGAGG
841GGGAACATGA CCTCGTCCAG GGCTCTGGCC AGCAGCCCCA GGCTGGGCTC TCCCAGGCCA
901ACTTCACCCT GGGCCCTGTG AGCCGCTCCC ACGGGGGCCA GTACAGATGC TACGGTGCAC
961ACAACCTCTC CCCTAGGTGG TCGGCCCCCA GCGACCCCCT GGCCATCCtg atcgcaggac
1021tgatccctga catacccgcc ctctcggtgc agccgggccc caaggtggcc tcaggagaga
1081acgtgaccct gctgtgtcag tcatggcatc agatagacac tttctttttg accaaggagg
1141gggcagccca tcccccgctg tgtctaaagt caaagtacca gtcttataga caccaggctg
1201aattctccat gagtcctgtg acctcagccc agggtggaac ctaccgatgc tacagcgcaa
1261tcaggtccta cccctacctg ctgtccagcc ctagttaccc ccaggagctc gtggtctcag
1321gaccctctgg ggatcccagc ctctcaccta caggctccac ccccacacct ggccctgagg
1381accagcccct cacccccacg gggttggatc cccagagtgg tctgggaagg cacctggggg
1441ttgtgactgg ggtctcagtg gccttcgtcc tgctgctgtt cctcctcctc ttcctcctcc
1501tccgacatcg gcatcagagc aaacacagga catcggccca tttctaccgt cctgcagggg
1561ctgcggggcc agagcccaag gaccagggcc tgcagaagag ggccagccca gttgctgaca
1621tccaggagga aattctcaat gctgccgtga aggacacaca gcccaaggac ggggtggaga
1681tggatgctcg ggctgctgca tctgaagccc cccaggatgt gacctacgcc cagctacaca
1741gcttgaccct cagacgggag gcaactgagc ctcctccatc ccaggaaagg gaacctccag
1801ctgaacccag catctacgCC CCCCTGGCCA TCCACTACCC AACTTTCTTG TACAAAGTtg
1861gcattataag aaagcattgc ttatcaattt gttgcaacga ac

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