Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_14988
Subject:
XM_006540000.2
Aligned Length:
2503
Identities:
1844
Gaps:
331

Alignment

Query    1  ATGGACGTCGTGGACCCTGACATTTTCAATAGAGACCCCCGGGACCACTATGACCTGCTACAGCGGCTGGGTGG  74
            ||||.|.|.||||||||.||||||||.||||..|||||.||.||.||||||||.||.||.||.||.||||||||
Sbjct    1  ATGGCCCTTGTGGACCCCGACATTTTTAATAAGGACCCTCGAGAACACTATGATCTACTGCAACGACTGGGTGG  74

Query   75  CGGCACGTATGGGGAAGTCTTTAAGGCTCGAGACAAGGTGTCAGGGGACCTGGTGGCACTGAAGATGGTGAAGA  148
            .||.||.|||||.|||||.||.||||||||.|||||||||||...||||||||||||..|||||||||||||||
Sbjct   75  TGGAACTTATGGAGAAGTATTCAAGGCTCGCGACAAGGTGTCTAAGGACCTGGTGGCTTTGAAGATGGTGAAGA  148

Query  149  TGGAGCCTGATGATGATGTCTCCACCCTTCAGAAGGAAATCCTCATATTGAAAACTTGCCGGCACGCCAACATC  222
            ||||||||||||||||.|||.||||||||||||||||.||.|||||..||||||||||||||||||||||||||
Sbjct  149  TGGAGCCTGATGATGACGTCGCCACCCTTCAGAAGGAGATTCTCATGCTGAAAACTTGCCGGCACGCCAACATC  222

Query  223  GTGGCCTACCATGGGAGTTATCTCTGGTTGCAGAAACTCTGGATCTGCATGGAATTCTGTGGGGCTGGTTCTCT  296
            |||||.||||||||.|||||.||||||.|||||||.||.|||||||||||||||||||||||.|||||||||||
Sbjct  223  GTGGCTTACCATGGCAGTTACCTCTGGCTGCAGAAGCTGTGGATCTGCATGGAATTCTGTGGAGCTGGTTCTCT  296

Query  297  CCAGGACATCTACCAAGTGACAGGCTCCCTGTCAGAGCTCCAGATTAGCTATGTCTGCCGGGAAGTGCTCCAGG  370
            |||||||||||||||||||||.|||||.|||||.|||||||||||.||||||||.||||||||||||||.||||
Sbjct  297  CCAGGACATCTACCAAGTGACTGGCTCTCTGTCCGAGCTCCAGATCAGCTATGTGTGCCGGGAAGTGCTTCAGG  370

Query  371  GACTGGCCTATTTGCACTCACAGAAGAAGATACACAGGGACATCAAGGGAGCTAACATCCTCATCAATGA-TGC  443
            ||||||||||..||||.|||.|||||||||||||..|.||||||||||||||.||||||||||||||.|| |||
Sbjct  371  GACTGGCCTACCTGCATTCAGAGAAGAAGATACATCGAGACATCAAGGGAGCCAACATCCTCATCAACGACTGC  444

Query  444  TGGGGAGGTCAGATTGGCTGACTTTGGCATCTCGGCCCAGATTGGGGCTACACTGGCCAGACGCCTCTCTTTCA  517
             ||||||||.|...|||||||||||||.|||||.||||||||||||||.|||||||||.|.|||||.|||||||
Sbjct  445  -GGGGAGGTTAAGCTGGCTGACTTTGGGATCTCAGCCCAGATTGGGGCGACACTGGCCCGGCGCCTTTCTTTCA  517

Query  518  TTGGGACACCCTACTGGATGGCTCCGGAAGTGGCAGCTGTGGCCCTGAAGGGAGGATACAATGAGCTGTGTGAC  591
            ||||||||||.||||||||||||||.||.||||||||.||||||||||||||.|||||||||||||||||.|||
Sbjct  518  TTGGGACACCGTACTGGATGGCTCCAGAGGTGGCAGCGGTGGCCCTGAAGGGTGGATACAATGAGCTGTGCGAC  591

Query  592  ATCTGGTCCCTGGGCATCACGGCCATCGAACTGGCCGAGCTACAGCCACCGCTCTTTGATGTGCACCCTCTCAG  665
            ||||||||.||.||||||||.||||||||.|||||.|||||.|||||.||.|||||||||||||||||||||||
Sbjct  592  ATCTGGTCTCTTGGCATCACAGCCATCGAGCTGGCTGAGCTTCAGCCCCCTCTCTTTGATGTGCACCCTCTCAG  665

Query  666  AGTTCTCTTCCTCATGACCAAGAGTGGCTACCAGCCTCCCCGACTGAAGGAAAAAGGCAAATGGTCGGCTGCCT  739
            .|||||||||||||||||||||||.||.|||||||||||.||.|||||||||||..|||.||||||..||.|||
Sbjct  666  GGTTCTCTTCCTCATGACCAAGAGCGGGTACCAGCCTCCTCGGCTGAAGGAAAAGAGCAGATGGTCATCTTCCT  739

Query  740  TCCACAACTTCATCAAAGTCACTTCTGACTAAGAGTCCCAAGAAACGACCCAGCGCCACCAAGATGCTCAGTCA  813
            ||||||||||..|||||||||| .||.|||||||...||||||||||.|||||.||||||||||||||||||||
Sbjct  740  TCCACAACTTTGTCAAAGTCAC-CCTCACTAAGAACTCCAAGAAACGCCCCAGTGCCACCAAGATGCTCAGTCA  812

Query  814  TCAACTGGTATCCCAGCCTGGGCTGAATCGAGGCCTGATCCTGGATCTTCTTGACAAACTGAAGAATCCCGGGA  887
            |||.|||||.||||||||.||||||||..|||||||||||.|||||||||||||||||.||||||||||.||||
Sbjct  813  TCAGCTGGTGTCCCAGCCAGGGCTGAACAGAGGCCTGATCTTGGATCTTCTTGACAAAATGAAGAATCCTGGGA  886

Query  888  AAGGAC--CCTCCATTGGGGACATTGAGGATGAGGAGCCCGAGCTACCCCCTGCTATCCCTCGGCGGATCAGAT  959
            |.||.|  ||     ||..||.|||||.|||||||||||.||||.|||||||||.|||||||||||||||||||
Sbjct  887  AGGGGCTGCC-----TGTTGATATTGAAGATGAGGAGCCTGAGCCACCCCCTGCCATCCCTCGGCGGATCAGAT  955

Query  960  CCACCCACCGCTCCAGCTCTCTGGGGATCCCAGATGCAGACTGCTGTCGGCGGCACATGGAGTTCAGGAAGCTC  1033
            |.|||.||||..|||||||.||.|||||||||||||||||||||||.|||.||||.|||||||||..||.||.|
Sbjct  956  CTACCTACCGGGCCAGCTCACTAGGGATCCCAGATGCAGACTGCTGCCGGAGGCAAATGGAGTTCCAGAGGCCC  1029

Query 1034  CGAGGAATGGAGACCAGACCCCCAGCCAACACCGCTCGCCTACAGCCTCCTCGAGACCTCAGGAGCAGCAGCCC  1107
            .||.|..||||...||||||.|..||..|.||.|.||||.||.|.||.|||..|.||.||.||||||.|||.||
Sbjct 1030  AGATGCGTGGACTGCAGACCTCAGGCTGAAACTGTTCGCTTATATCCCCCTGCACACTTCGGGAGCACCAGTCC  1103

Query 1108  CAGGAAGCAACTGTCAGAGTCGTCTGACGATGACTATGACGACGTGGACATCCCCACCCCTGCAGAGGACACAC  1181
            |||||..||.||||||||   .|||||.||.||||||||.||.|||||||||||..|||||.|||||.|||.||
Sbjct 1104  CAGGAGTCAGCTGTCAGA---TTCTGATGACGACTATGATGATGTGGACATCCCTGCCCCTTCAGAGAACATAC  1174

Query 1182  CTCCTCCACTTCCCCCCAAGCCCAAGTTCCGTTCTCCATCAGACGAGGGTCCTGGGAGCATGGGGGATGATGGG  1255
            ||||||||||.|||||||||||||||||.||.|||||||||||.||.|||.||||..|.||..||||.||||||
Sbjct 1175  CTCCTCCACTGCCCCCCAAGCCCAAGTTTCGGTCTCCATCAGATGATGGTTCTGGAGGAATTAGGGACGATGGG  1248

Query 1256  CAGCTGAGCCCGGGGGTGCTGGTCCGGTGTGCCAGTGGGCCCCCACCAAACAGCCCCCGTCCTGGGCCTCCCCC  1329
            ||..|||||||.|||||.|||||.||.|||||.|||||||||||.|||...|..|||||.|||||.||||||||
Sbjct 1249  CAATTGAGCCCAGGGGTTCTGGTTCGATGTGCAAGTGGGCCCCCTCCACGTACTCCCCGACCTGGACCTCCCCC  1322

Query 1330  ATCCACCAGCAGCCCCCACCTCACCGCCCATTCAGAACCCTCACTCTGGAACCCACC--CTCCCGGGAGCTTGA  1401
            |.|.|||.|||||||.||||||||.||.|..|||||.||||||.|.|||||||||.|  ||||  |||||..|.
Sbjct 1323  AGCGACCTGCAGCCCTCACCTCACAGCTCGCTCAGATCCCTCATTGTGGAACCCAGCTGCTCC--GGAGCCAGG  1394

Query 1402  CAAGCCCCCACTTCTGCCCCCCAAGAAGGAAAAGATGAAGAGAAAG--GG----------------------AT  1451
            |.||||||||||..|.|||||.|.||||||||||||||.|.|||||  ||                      ||
Sbjct 1395  CCAGCCCCCACTCGTACCCCCAAGGAAGGAAAAGATGAGGGGAAAGATGGAGAACGAGAAGCGCAGAGAGAAAT  1468

Query 1452  GTGCCCTTCTCGTAAAGTTGTTCAATGGCTGCCCCCTCCGGATCCACAGCACGGCCGCCTGGACACATCCCTCC  1525
            .|.|||||||.||.||.||.|||||||||||.|||||.|.||||||||||||.||.|||||||||||||||||.
Sbjct 1469  ATCCCCTTCTTGTGAAATTATTCAATGGCTGTCCCCTTCAGATCCACAGCACAGCTGCCTGGACACATCCCTCT  1542

Query 1526  ACCAAGGACCAGCACCTGCTCCTGGGGGCAGAGGAAGGCATCTTCATCCTGAACCGGAATGACCAGGAGGCCAC  1599
            ||.||.||.|||.||||||||||||||||||||||||||||.|||||.||||||||||||||.|||||||||||
Sbjct 1543  ACAAAAGATCAGAACCTGCTCCTGGGGGCAGAGGAAGGCATTTTCATACTGAACCGGAATGATCAGGAGGCCAC  1616

Query 1600  GCTGGAAATGCTCTTTCCTAGCCGGACTACGTGGGTGTACTCCATCAACAACGTTCTCATGTCTCTCTCAGGAA  1673
            ||||||||||.||||.|||.||||.||.||.|||.|.||.|.||||||||||.|.|||||||||||||||||.|
Sbjct 1617  GCTGGAAATGATCTTCCCTGGCCGCACAACCTGGCTCTATTGCATCAACAACCTCCTCATGTCTCTCTCAGGGA  1690

Query 1674  AGACCCCCCCCTTTTATTCTCATAGCATCCCTTGCCCTGCTGGAACGGGAAAGAGACCAGAAGCAGGAAACCCC  1747
            ||||.|||..|.|.|||||||||||||| |||.|.||||||.||| .|||||||...|||||  .||.||.|||
Sbjct 1691  AGACACCCTACCTGTATTCTCATAGCAT-CCTGGGCCTGCTTGAA-AGGAAAGACGGCAGAA--CGGGAAGCCC  1760

Query 1748  CATCGGTTCACATTAGCCCCCCACCGCCTACTGCNAANGGAGA-AACATGGTTTCCACCAANGATCCAGGACAC  1820
            ||| .|.||||||||| |||.|||||..|||||..||  ||.| ||||||||.||||..|| ||||||||||||
Sbjct 1761  CAT-TGCTCACATTAG-CCCTCACCGGTTACTGGCAA--GAAAGAACATGGTCTCCAGTAA-GATCCAGGACAC  1829

Query 1821  CAAAGGGCTGCCGGGCGTGCTGTGTGGCGGAGGGTGCGAGCTCTGGGGGCCCGTTCCTGTGCGGTGCATTGGAG  1894
            |||| |||||||||||.|||||||||||.|||.||||.||||||||||||||.|||.|.||.||.|||||||||
Sbjct 1830  CAAA-GGCTGCCGGGCTTGCTGTGTGGCTGAGAGTGCTAGCTCTGGGGGCCCATTCTTATGTGGGGCATTGGAG  1902

Query 1895  ACGTCCGTTGTCCTGCTTCAGTGGTACCAGCCCATGAACAAATTCCTGCTTGTCCGGCAGGTGCTGTTCCCACT  1968
            |||||.||.||..||||.|||||||||||.||.||||||||||||.|||||||||||||||||||||||||.||
Sbjct 1903  ACGTCTGTGGTTTTGCTCCAGTGGTACCAACCAATGAACAAATTCTTGCTTGTCCGGCAGGTGCTGTTCCCGCT  1976

Query 1969  GCCGACGCCTCTGTCCGTGTTCGCGCTGCTGACCGGGCCAGGCTCTGAGCTGCCCGCTGTGTGCATCGGCGTGA  2042
            |||.|||||.|||.|.||||||.||||||||||...|||.|||||.||||||||.|||||||||||||||||||
Sbjct 1977  GCCCACGCCGCTGCCGGTGTTCACGCTGCTGACAACGCCGGGCTCCGAGCTGCCAGCTGTGTGCATCGGCGTGA  2050

Query 2043  GCCCCGGGCGGCCGGGGAAGTCGGTGCTCTTCCACACGGTGCGCTTTGGCGCGCTCTCTTGCTGGCTGGGCGAG  2116
            ||||.||||.|.|||..||||||||||||||||||||.||||||||.||.|||||.||.||||||||||.|||.
Sbjct 2051  GCCCGGGGCAGGCGGCAAAGTCGGTGCTCTTCCACACCGTGCGCTTCGGTGCGCTGTCCTGCTGGCTGGACGAC  2124

Query 2117  ATGAGCACCGAGCACAGGGGACCCGTGCAGGTGACCCAGGTAGAGGAAGATATGGTGATGGTGTTGATGGATGG  2190
            ...|||||.|||||||.||||||.||||||||||.|||.|||.|||||||.|||||||||||||||||||||||
Sbjct 2125  TCCAGCACGGAGCACAAGGGACCAGTGCAGGTGATCCAAGTAAAGGAAGACATGGTGATGGTGTTGATGGATGG  2198

Query 2191  CTCTGTGAAGCTGGTGACCCCGGAGGGGTCCCCAGTCCGGGGACTTCGCACACCTGAGATCCCCATGACCGAAG  2264
            | |.|                                                                     
Sbjct 2199  C-CGG---------------------------------------------------------------------  2202

Query 2265  CGGTGGAGGCCGTGGCTATGGTTGGAGGTCAGCTTCAGGCCTTCTGGAAGCATGGAGTGCAGGTGTGGGCTCTA  2338
                                                                                      
Sbjct 2203  --------------------------------------------------------------------------  2202

Query 2339  GGCTCGGATCAGCTGCTACAGGAGCTGAGAGACCCTACCCTCACTTTCCGTCTGCTTGGCTCCCCCAGGCCTGT  2412
                                                                                      
Sbjct 2203  --------------------------------------------------------------------------  2202

Query 2413  AGTGGTGGAGACACGCCCAGTGGATGATCCTACTGCTCCCAGCAACCTCTACATCCAGGAA  2473
                                                                         
Sbjct 2203  -------------------------------------------------------------  2202

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