Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15007
- Subject:
- XM_006502839.1
- Aligned Length:
- 4515
- Identities:
- 953
- Gaps:
- 3427
Alignment
Query 1 ATGCGGCCTCGCTCCCGGAGCCTCAGTCCCGGACGATCCCCAGTATCCTTTGACAGTGAAATAATAATGATGAA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 TCATGTTTACAAAGAAAGATTCCCAAAGGCCACCGCACAAATGGAAGAGCGACTAGCAGAGTTTATTTCCTCCA 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 ACACTCCAGACAGCGTGCTGCCCTTGGCAGATGGAGCCCTGAGCTTTATTCATCATCAGGTGATTGAGATGGCC 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 CGAGACTGCCTGGATAAATCTCGGAGTGGCCTCATTACATCACAATACTTCTACGAACTTCAAGATAATTTGGA 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 GAAACTTTTACAAGATGCTCATGAGCGCTCAGAGAGCTCAGAAGTGGCTTTTGTGATGCAGCTGGTGAAAAAGC 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 TGATGATTATCATTGCCCGCCCAGCACGTCTCCTGGAATGCCTGGAGTTTGACCCTGAAGAGTTCTACCACCTT 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 TTAGAAGCAGCTGAGGGCCACGCCAAAGAGGGACAAGGGATTAAATGTGACATTCCCCGCTACATCGTTAGCCA 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 GCTGGGCCTCACCCGGGATCCCCTAGAAGAAATGGCCCAGTTGAGCAGCTGTGACAGTCCTGACACTCCAGAGA 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 CAGATGATTCTATTGAGGGCCATGGGGCATCTCTGCCATCTAAAAAGACACCCTCTGAAGAGGACTTCGAGACC 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 ATTAAGCTCATCAGCAATGGCGCTATGGGGCTGTATTTCTGGTGCGGCACAAGTCCACCCGGCAGCGCTTGCCA 740
Sbjct 1 -------------------------------------------------------------------------- 0
Query 741 TGAGAGATCACAAGCAGACTTGATCTACGGACAGATCAGCAGGCTTTCGTGAGCGTGACATACTGACTTCGCTG 814
Sbjct 1 -------------------------------------------------------------------------- 0
Query 815 AGAACCCCTTGGTGGTCAGCATGTTCTGCTCCTTTGATACCAAGCGCCACTTGTGCATGGTGATGGAGTACGTT 888
Sbjct 1 -------------------------------------------------------------------------- 0
Query 889 GAAGGGGGAGACTGTGCCACTCTGCTGAAGAATATTGGGGCCCTGCCTGTGGACATGGTGCGTCTATACTTTGC 962
Sbjct 1 -------------------------------------------------------------------------- 0
Query 963 GGAAACTGTGCTGGCCCTGGAGTACTTACACAACTATGGCATCGTGCACCGTGACCTCAAGCCTGACAACCTCC 1036
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1037 TAATTACATCCATGGGGCACATCAAGCTCACGGACTTTGGACTGTCCAAAATGGGCCTCATGAGTCTGACAACG 1110
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1111 AACTTGTATGAGGGTCATATTGAAAAGGATGCCCGGGAATTCCTGGACAAGCAGGTATGCGGGACCCCAGAATA 1184
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1185 CATTGCGCCTGAGGTGATCCTGCGCCAGGGCTATGGGAAGCCAGTGGACTGGTGGGCCATGGGCATTATCCTGT 1258
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1259 ATGAGTTCCTGGTGGGCTGCGTCCCTTTTTTTGGAGATACTCCGGAGGAGCTCTTTGGGCAGGTGATCAGTGAT 1332
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1333 GAGATTGTGTGGCCTGAGGGTGATGAGGCACTGCCCCCAGACGCCCAGGACCTCACCTCCAAACTGCTCCACCA 1406
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1407 GAACCCTCTGGAGAGACTTGGCACAGGCAGTGCCTATGAGGTGAAGCAGCACCCATTCTTTACTGGTCTGGACT 1480
|..||||||||||
Sbjct 1 -------------------------------------------------------------ATGGGTCTGGACT 13
Query 1481 GGACAGGACTTCTCCGCCAGAAGGCTGAATTTATTCCTCAGTTGGAGTCAGAGGATGATACTAGCTATTTTGAC 1554
|||||||||||||.||.|||||||||||||||||.||||||.||||||||||||||||.||.|||||.|||||.
Sbjct 14 GGACAGGACTTCTACGGCAGAAGGCTGAATTTATACCTCAGCTGGAGTCAGAGGATGACACCAGCTACTTTGAT 87
Query 1555 ACCCGCTCAGAGCGATACCACCACATGGACTCGGAGGATGAGGAAGAAGTGAGTGAGGATGGCTGCCTTGAGAT 1628
|||||.|||||.|||||||||||..|||||||.|||||||||||.|||||||||||||||||||||||||||||
Sbjct 88 ACCCGTTCAGAACGATACCACCATGTGGACTCTGAGGATGAGGAGGAAGTGAGTGAGGATGGCTGCCTTGAGAT 161
Query 1629 CCGCCAGTTCTCTTCCTGCTCTCCAAGGTTCAACAAGGTGTACAGCAGCATGGAGCGGCTCTCACTGCTCGAGG 1702
.||||||||.||||||||||||||||||||||.||||||.|||||.||||||||.|||||.||.|||||.||||
Sbjct 162 TCGCCAGTTTTCTTCCTGCTCTCCAAGGTTCAGCAAGGTTTACAGTAGCATGGAACGGCTTTCCCTGCTTGAGG 235
Query 1703 AGCGCCGGACACCACCCCCGACCAAGCGCAGCCTGAGTGAGGAGAAGGAGGACCATTCGGATGGCCTGGCAGGG 1776
|.||||||||||||||.||.||||||||||||||.||||||||.|||||.||.||.||.||.|||.|||||||.
Sbjct 236 AACGCCGGACACCACCTCCAACCAAGCGCAGCCTCAGTGAGGAAAAGGAAGATCACTCAGACGGCTTGGCAGGA 309
Query 1777 CTCAAAGGCCGAGA-CGGAGGCTGGGTGATTGGCTCCCCTGAGATTATTACGGAAGCGGCTGTCGGTGTCTGAG 1849
||.||.|||||||| ||.| |||||||||||||.|||||||||| ||||||||||||||.|.||.|||||.|||
Sbjct 310 CTGAAGGGCCGAGATCGCA-GCTGGGTGATTGGGTCCCCTGAGA-TATTACGGAAGCGGTTATCTGTGTCCGAG 381
Query 1850 TCGTCCCANCACAGAGAGTGACTCAAGCCCTCCAATGAACA-TGCGACGCCGCTGCTCAGGCTTCCTGGATGCG 1922
||.||||| ||||||||||||.||.||.||||||||| ||| ||||||..||.||.||||||.|||..||||.|
Sbjct 382 TCATCCCA-CACAGAGAGTGATTCGAGTCCTCCAATG-ACAGTGCGACATCGGTGTTCAGGCCTCCCAGATGGG 453
Query 1923 CCTCGGTTCCCGGAGGGCCNTGAGGAGCCCAGCAGCACCCNTCAGGAGGCAACCACAGGAGGGTATATGGGTCC 1996
|||| |..|||.|||||||.|.||.|||||||.|| |||.|||||.||||||.|||||||||||||
Sbjct 454 CCTC---------ATTGCCCTGAGGAGACTAGTAGCACCCCTC-GGAAGCAACAACAGGAAGGTATATGGGTCC 517
Query 1997 TGACA-CCCCCCATTCT-GAGAGGGGGTATCTGGGCCTGTCACTGAAC-ACTCNAGGGGA-GCAGCGGCCAAAG 2066
| || .|||||| ||| ||||||||..||||.|||||||..|||||| ||....||.|| |||.|.| |||
Sbjct 518 T--CATTCCCCCA-TCTGGAGAGGGGTCATCTAGGCCTGTTCCTGAACGACCGTTGGAGAGGCAACTG---AAG 585
Query 2067 CTGGATGAGGAAGCTGTTGGCCGGAGCAGT-GGTTCCAGT---CCAGCTATGGAGACCCGAGGCCGTGGGACCT 2136
|||||||||||..||..|||||..|||||| ||| || |||||..|||||||.|||||||||||||||.
Sbjct 586 CTGGATGAGGAGCCTCCTGGCCAAAGCAGTCGGT----GTTGCCCAGCCCTGGAGACACGAGGCCGTGGGACCC 655
Query 2137 CACAGCTGGCTGAGGGAGCCACAGCCAAGGCCATCAGTGACCTGGCTGTGCGTAGGGCCCGCCACCGGCTGCTC 2210
|.|||||.|||||||.|||.||||||||.||||||||.|||||.|||||||||||||||||.||||||||||||
Sbjct 656 CTCAGCTAGCTGAGGAAGCTACAGCCAAAGCCATCAGCGACCTAGCTGTGCGTAGGGCCCGTCACCGGCTGCTC 729
Query 2211 TCTGGGGACTCAACAGAGAAGCGCACTGCTCGCCCTGTCAACAAAGTGATCAAGTCCGCCTCAGCCACAGCCCT 2284
|||||||||||.|.||||||||||||..|||||||||||||||||||.||||||||.||||||||.||.|||||
Sbjct 730 TCTGGGGACTCTATAGAGAAGCGCACCACTCGCCCTGTCAACAAAGTAATCAAGTCAGCCTCAGCTACGGCCCT 803
Query 2285 CTCACTCCTCATTCCTTCGGAACACCACACCTGCTCCCCGTTGGCCAGCCCCATGTCCCCACATTCTCAGTCGT 2358
.||.||||||||||||||.||||||||..|||||||.||.|||||||||||.||||||||||||||.|||||.|
Sbjct 804 TTCCCTCCTCATTCCTTCAGAACACCATGCCTGCTCACCATTGGCCAGCCCTATGTCCCCACATTCCCAGTCAT 877
Query 2359 CCAACCCATCATCCCGGGACTCTTCTC----------------------------------------------- 2385
||||.|||||||||.||||||||||||
Sbjct 878 CCAATCCATCATCCAGGGACTCTTCTCCAAGCAGGGACTTCTTGCCAGCCCTTGGCAGCTTGAGGCCTCCCATC 951
Query 2386 -----------------CAAGAAGTATGGCTTCACCCTGCGGGCCATTCGCGTCTACATGGGTGACTCCGATGT 2442
|||||||||||||||||||||||||||||||||.|||||||||||||||.|.|||||
Sbjct 952 ATCATCCACCGAGCTGGCAAGAAGTATGGCTTCACCCTGCGGGCCATTCGAGTCTACATGGGTGACACTGATGT 1025
Query 2443 CTACACCGTGCACCATATGGTGTGGCACGTGGAGGATGGAGGTCCGGCCAGTGAGGCAGGGCTTCGTCAAGGTG 2516
|||||||||.|||||.|||||||||||.|||||||||||.|||||.||||||||.||||||||||||||.||||
Sbjct 1026 CTACACCGTACACCACATGGTGTGGCATGTGGAGGATGGTGGTCCAGCCAGTGAAGCAGGGCTTCGTCAGGGTG 1099
Query 2517 ACCTCATCACCCATGTCAATGGGGAACCTGTGCATGGCCTGGTGCACACGGAGGTGGTGGAGC----------- 2579
||||||||||||||||||||||.||.|||||||||||.||.||.|||||.||.||||||||||
Sbjct 1100 ACCTCATCACCCATGTCAATGGTGAGCCTGTGCATGGGCTAGTCCACACAGAAGTGGTGGAGCTGGTTCTGAAG 1173
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 1174 AGTGGAAACAAGGTATCAATTTCAACAACTCCCTTGGAGAACACGTCAATCAAAGTGGGGCCAGCTAGGAAAGG 1247
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 1248 CAGCTATAAAGCCAAGATGGCCCGAAGGAGCAAACGGAGCAAAGGCAAGGATGGGCAAGAAAGCCGAAAAAGAA 1321
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 1322 GCTCCCTATTCCGGAAAATCACAAAGCAGGCCTCCTTGCTCCACACCAGCCGCAGCCTTTCTTCCCTTAACCGC 1395
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 1396 TCCTTGTCATCAGGGGAGAGTGGTCCAGGCTCTCCCACACACAGCCACAGCCTCTCTCCCAGATCTCCTCCTCA 1469
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 1470 GGGATACCGGGTAGCCCCAGATGCTGTGCACTCAGTAGGAGGGAATTCCTCGCAGAGCAGCTCTCCCAGCTCCA 1543
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 1544 GTGTGCCCAGTTCTCCTGCTGGCTCTGGACATACACGGCCCAGCTCTCTTCACGGTCTGGCACCCAAGCTCCAA 1617
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 1618 CGCCAATACCGCTCACCACGGCGCAAGTCAGCAGGCAGCATCCCACTGTCACCGTTGGCCCACACCCCTTCCCC 1691
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 1692 ACCAGCAACGGCAGCTTCACCTCAGCGTTCCCCATCACCCTTGTCTGGCCATGGGTCTCAGTCCTTTCCTACCA 1765
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 1766 AACTTCACTTGTCTCCTCCGCTAGGTAGGCAGCTCTCACGGCCCAAGAGTGCAGAGCCACCCCGCTCTCCCCTA 1839
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 1840 CTTAAGAGGGTGCAGTCTGCTGAGAAGCTGGCGGCTGCACTGGCAGCTGCTGAGAAGAAGTTAGCACCTTCCCG 1913
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 1914 CAAACATAGTCTTGACCTGCCCCATGGTGAACTAAAGAAGGAACTGACACCCAGGGAAGCCAGCCCTCTGGAGG 1987
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 1988 TAGTTGGAACCAGAAGTGTGCTATCCGGGAAAGGGCCACTTCCAGGAAAGGGGGTACTGCAGCCTGCTCCTTCA 2061
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 2062 CGGGCCCTTGGGACCCTACGGCAGGATCGAGCTGAACGCCGTGAGTCACTGCAAAAACAAGAAGCAATCCGGGA 2135
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 2136 AGTAGACTCCTCAGAAGATGACACTGATGAGGAGCCTGAGAACAGCCAGGCCACACAGGAGCCAAGATTGTCCC 2209
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 2210 CCCACCCAGAAGCAAGCCACAATCTACTCCCTAAAGGTTCAGGAGAGGGTACAGAAGAGGACACTTTCTTGCAC 2283
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 2284 AGGGATCTAAAGAAGCAGGGCCCTGTACTCTCAGGTCTAGTGACAGGGGCCACACTAGGCTCCCCCCGAGTAGA 2357
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 2358 CGTTCCTGGGCTCTCCCCAAGGAAGCTCAGCAGGCCACAAGCCTTTGAGGAAGCTACCAACCCCTTACAAGTCC 2431
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 2432 CTAGCCTGAGCAGGTCTGGACCCACAAGCCCCACCCCCTCTGAAGGCTGCTGGAAGGCCCAGCACCTCCACACA 2505
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 2506 CAGGCACTAACTGCACTTTGTCCCAGCTTTTCAGAACTTACCCCTACCGGTTGTTCTGCTGCCACCTCCACCTC 2579
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 2580 TGGAAAGCCAGGGACATGGTCCTGGAAATTCCTTATTGAGGGTCCAGACAGAGCATCCACGAACAAGACCATAA 2653
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 2654 CAAGGAAAGGTGAACCAGCTAACTCCCAAGATACGAATACCACGGTCCCAAATCTTCTGAAGAACCTGTCTCCT 2727
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 2728 GAGGAGGAGAAGCCACAGCCACCAAGTGTGCCTGGGCTGACCCATCCGCTTCTTGAGGTCCCCAGCCAGAACTG 2801
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 2802 GCCATGGGAGTCTGAATGTGAACAAATGGAGAAAGAAGAACCATCCCTGAGCATCACCGAAGTGCCTGATTCCT 2875
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 2876 CAGGCGACAGGAGGCAGGACATTCCATGCAGAGCCCACCCCCTGAGCCCAGAAACCCGGCCCAGCCTGCTCTGG 2949
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 2950 AAAAGCCAAGAACTTGGGGGCCAGCAAGATCATCAGGACTTAGCACTGACATCAGATGAGCTCTTAAAGCAAAC 3023
Query 2580 - 2579
Sbjct 3024 C 3024
