Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15013
- Subject:
- XM_006524688.1
- Aligned Length:
- 4207
- Identities:
- 1943
- Gaps:
- 2045
Alignment
Query 1 ATGTCTGCGGAGAGCGGCCCTGGGACGAGATTGAGAAATCTGCCAGTAATGGGGGATGGACTAGAAACTTCCCA 74
||||||.|||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||.|||||
Sbjct 1 ATGTCTACGGAGAGCGGCCCTGGGACAAGATTGAGAAATCTGCCAGTAATGGGGGATGGACTAGAAACCTCCCA 74
Query 75 AATGTCTACAACACAGGCCCAGGCCCAACCCCAGCCAGCCAACGCAGCCAGCACCAACCCCCCGCCCCCAGAGA 148
||||||||||||.||||||||||||||||||||||||||.||.||||||||||||||.||.||.||||||||||
Sbjct 75 AATGTCTACAACGCAGGCCCAGGCCCAACCCCAGCCAGCAAATGCAGCCAGCACCAATCCTCCACCCCCAGAGA 148
Query 149 CCTCCAACCCTAACAAGCCCAAGAGGCAGACCAACCAACTGCAATACCTGCTCAGAGTGGTGCTCAAGACACTA 222
|||||||||||||||||||||||||.|||||.||||||||||||||.|||||||||||||||||||||||||||
Sbjct 149 CCTCCAACCCTAACAAGCCCAAGAGACAGACAAACCAACTGCAATATCTGCTCAGAGTGGTGCTCAAGACACTA 222
Query 223 TGGAAACACCAGTTTGCATGGCCTTTCCAGCAGCCTGTGGATGCCGTCAAGCTGAACCTCCCTGATTACTATAA 296
|||||||||||||||||.|||||||||||||||||.||||||||||||||||||||||||||||||||||||||
Sbjct 223 TGGAAACACCAGTTTGCGTGGCCTTTCCAGCAGCCCGTGGATGCCGTCAAGCTGAACCTCCCTGATTACTATAA 296
Query 297 GATCATTAAAACGCCTATGGATATGGGAACAATAAAGAAGCGCTTGGAAAACAACTATTACTGGAATGCTCAGG 370
|||.||||||||.||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GATTATTAAAACACCCATGGATATGGGAACAATAAAGAAGCGCTTGGAAAACAACTATTACTGGAATGCTCAGG 370
Query 371 AATGTATCCAGGACTTCAACACTATGTTTACAAATTGTTACATCTACAACAAGCCTGGAGATGACATAGTCTTA 444
||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||.||||||
Sbjct 371 AATGTATCCAGGACTTCAACACTATGTTTACAAATTGTTACATCTATAACAAGCCTGGAGATGACATCGTCTTA 444
Query 445 ATGGCAGAAGCTCTGGAAAAGCTCTTCTTGCAAAAAATAAATGAGCTACCCACAGAAGAAACCGAGATCATGAT 518
|||||||||||||||||.||||||||||||||||||||.|||||.||.||.|||||||||||.|||||||||||
Sbjct 445 ATGGCAGAAGCTCTGGAGAAGCTCTTCTTGCAAAAAATCAATGAACTGCCTACAGAAGAAACTGAGATCATGAT 518
Query 519 AGTCCAGGCAAAAGGAAGAGGACGTGGGAGGAAAGAAACAGGGACAGCAAAACCTGGCGTTTCCACGGTACCAA 592
||||||||||||||||||||||||.||||||||||||||||||.|||||||.|||||.||.|||||||||||||
Sbjct 519 AGTCCAGGCAAAAGGAAGAGGACGAGGGAGGAAAGAAACAGGGGCAGCAAAGCCTGGTGTATCCACGGTACCAA 592
Query 593 ACACAACTCAAGCATCGACTCCTCCGCAGACCCAGACCCCTCAGCCGAA---TCCTCCTCCTGTGCAGGCCACG 663
||||||||||||||||.|||.||||||||||||||||.|||||||.||| ||||||.||||||||||||||.
Sbjct 593 ACACAACTCAAGCATCAACTTCTCCGCAGACCCAGACGCCTCAGCAGAACCCTCCTCCACCTGTGCAGGCCACA 666
Query 664 CCTCACCCCTTCCCTGCCGTCACCCCGGACCTCATCGTCCAGACCCCTGTCATGACAGTGGTGCCTCCCCAGCC 737
.||||||||||.|||||.||||||||.||||||||.|.||||.|.||||||||||||.|||||||.||.|||||
Sbjct 667 ACTCACCCCTTTCCTGCTGTCACCCCAGACCTCATTGCCCAGCCTCCTGTCATGACAATGGTGCCCCCTCAGCC 740
Query 738 ACTGCAGACGCC--CCCCGCCAGTGCCCCCCCAGCCACAACCCCAACCCGCTTCAGCTCCCCAGCCCGTACAGA 809
|||.|||||.|| |.||| ||.|||||||||||||.|||||.|||.|||.|||.|||.|||||.||.||||
Sbjct 741 ACTTCAGACTCCTTCACCG---GTACCCCCCCAGCCACCACCCCCACCTGCTCCAGTTCCACAGCCTGTGCAGA 811
Query 810 GCCACCCACCCATCATCGCGGCCACCCCACAGCCTGTGAAGACAAAGAAGGGAGTGAAGAGGAAAGCAGACACC 883
|.|||||.||||||||.|||.|||||||.||||||||||||||||||||.||.|||||||||||||||||.|||
Sbjct 812 GTCACCCGCCCATCATTGCGACCACCCCCCAGCCTGTGAAGACAAAGAAAGGGGTGAAGAGGAAAGCAGATACC 885
Query 884 ACCACCCCCACCACCATTGACCCCATTCACGAGCCACCCTCGCTGCCCCCGGAGCCCAAGACCACCAAGCTGGG 957
||||||||.||||||||.|||||||||||.|||||||||||.|||.||||.||||||||||||.||||||||||
Sbjct 886 ACCACCCCTACCACCATCGACCCCATTCATGAGCCACCCTCACTGGCCCCAGAGCCCAAGACCGCCAAGCTGGG 959
Query 958 CCAGCGGCGGGAGAGCAGCCGGCCTGTGAAACCTCCAAAGAAGGACGTGCCCGACTCTCAGCAGCACCCAGCAC 1031
.|..|||||||||||||||.|.||||||||.||||||||||||||.||.||.|||||.|||||||||||||..|
Sbjct 960 TCCTCGGCGGGAGAGCAGCAGACCTGTGAAGCCTCCAAAGAAGGATGTACCGGACTCACAGCAGCACCCAGGGC 1033
Query 1032 CAGAGAAGAGCAGCAAGGTCTCGGAGCAGCTCAAGTGCTGCAGCGGCATCCTCAAGGAGATGTTTGCCAAGAAG 1105
|||||||||||||||||.||||.||||||||.|||||||||||.|||||||||||||||||||||||||||||.
Sbjct 1034 CAGAGAAGAGCAGCAAGATCTCTGAGCAGCTAAAGTGCTGCAGTGGCATCCTCAAGGAGATGTTTGCCAAGAAA 1107
Query 1106 CACGCCGCCTACGCCTGGCCCTTCTACAAGCCTGTGGACGTGGAGGCACTGGGCCTACACGACTACTGTGACAT 1179
||.||.|||||.||||||||.|||||||||||||||||.||||||||||||||.||.|||||||||||||||||
Sbjct 1108 CATGCTGCCTATGCCTGGCCTTTCTACAAGCCTGTGGATGTGGAGGCACTGGGTCTGCACGACTACTGTGACAT 1181
Query 1180 CATCAAGCACCCCATGGACATGAGCACAATCAAGTCTAAACTGGAGGCCCGTGAGTACCGTGATGCTCAGGAGT 1253
||||||.||.||||||||||||||||||||||||||||||||.|||.||||.||||||.|.|||||.|||||.|
Sbjct 1182 CATCAAACATCCCATGGACATGAGCACAATCAAGTCTAAACTAGAGTCCCGAGAGTACAGAGATGCCCAGGAAT 1255
Query 1254 TTGGTGCTGACGTCCGATTGATGTTCTCCAACTGCTATAAGTACAACCCTCCTGACCATGAGGTGGTGGCCATG 1327
||||||||||.||||||||||||||||||||||||||.|||||||||||.|||||||||||.|||||.||||||
Sbjct 1256 TTGGTGCTGATGTCCGATTGATGTTCTCCAACTGCTACAAGTACAACCCCCCTGACCATGAAGTGGTAGCCATG 1329
Query 1328 GCCCGCAAGCTCCAGGATGTGTTCGAAATGCGCTTTGCCAAGATGCCGGACGAGCCTGAGGAGCCAGTGGTGGC 1401
||.||.||.||||||||||||||.|||||||||||||||||||||||.||.||||||||.||||||||.||..|
Sbjct 1330 GCTCGAAAACTCCAGGATGTGTTTGAAATGCGCTTTGCCAAGATGCCTGATGAGCCTGAAGAGCCAGTTGTTAC 1403
Query 1402 CGTGTCCTCCCCCGGCAGTGCTCCCTCCCACCAAGGTTGTGGCCCCGCCCTCATCCCAGCGACAGCAGCAGCGA 1475
.||||||| |.||.|||||||..||.||.||.|||||.||.|||||.||||||| |.||.||||||||||||||
Sbjct 1404 AGTGTCCT-CTCCTGCAGTGCCACCCCCTACAAAGGTGGTAGCCCCACCCTCAT-CTAGTGACAGCAGCAGCGA 1475
Query 1476 TAGCTCCTCGGACAGTGACAGTTCGACTGATGACTCTGAGGAGGAGCGAGCCCAGCGGCTGGCTGAGCTCCAGG 1549
.||.||.||.|||||.||||||||.|||||.|||||||||||.|||||||||||||||||||||||.|||||||
Sbjct 1476 CAGTTCTTCCGACAGCGACAGTTCCACTGACGACTCTGAGGAAGAGCGAGCCCAGCGGCTGGCTGAACTCCAGG 1549
Query 1550 AGCAGCTCAAAGCCGTGCACGAGCAGCTTGCAGCCCTCTCTCAGCCCCAGCAGAACAAACCAAAGAAAAAGGAG 1623
|.||||||||.||||||||.||||||||||||||||||||.|||||||||||||||||||||||||||||||||
Sbjct 1550 AACAGCTCAAGGCCGTGCATGAGCAGCTTGCAGCCCTCTCACAGCCCCAGCAGAACAAACCAAAGAAAAAGGAG 1623
Query 1624 AAAGACAAGAAGGAAAAGAAAAAAGAAAAGCACAAAAGGAAAGAGGAAGTGGAAGAGAATAAAAAAAGCAAAGC 1697
||.||||||||||||||||||||.|||||||||||||.||||||.||||||||.||.|||||||||||||||.|
Sbjct 1624 AAGGACAAGAAGGAAAAGAAAAAGGAAAAGCACAAAAAGAAAGAAGAAGTGGAGGAAAATAAAAAAAGCAAAAC 1697
Query 1698 CAAGGAACCTCCTCCTAAAAAGACGAAGAAAAATAATAGCAGCAACAGCAATGTGAGCAAGAAGGAGCCAGCGC 1771
||||||||.||||||.||||||||.|||||||||||.|||||||||||||||||||||||||||||.||||..|
Sbjct 1698 CAAGGAACTTCCTCCCAAAAAGACAAAGAAAAATAACAGCAGCAACAGCAATGTGAGCAAGAAGGAACCAGTAC 1771
Query 1772 CCATGAAGAGCAAGCCCCCTCCCACGTATGAGTCGGAGGAAGAGGACAAGTGCAAGCCTATGTCCTATGAGGAG 1845
|||.|||||.||||||.||||||||.|||||.||.||.||.|||||.|||||.|||||.|||||.|||||||||
Sbjct 1772 CCACGAAGACCAAGCCGCCTCCCACATATGAATCAGAAGAGGAGGATAAGTGTAAGCCCATGTCTTATGAGGAG 1845
Query 1846 AAGCGGCAGCTCAGCTTGGACATCAACAAGCTCCCCGGCGAGAAGCTGGGCCGCGTGGTGCACATCATCCAGTC 1919
|||||||||||.||..|.||.||||||||.||.||.||.||||||||.|||||.||.||.|||||.||.|||||
Sbjct 1846 AAGCGGCAGCTAAGTCTAGATATCAACAAACTTCCTGGTGAGAAGCTAGGCCGTGTAGTACACATAATTCAGTC 1919
Query 1920 ACGGGAGCCCTCCCTGAAGAATTCCAACCCCGACGAGATTGAAATCGACTTTGAGACCCTGAAGCCGTCCACAC 1993
|.||||.||.||.||.||.||.|||||||||||.||||||||.||.||||||||||||||||||||.||.||||
Sbjct 1920 AAGGGAACCATCACTTAAAAACTCCAACCCCGATGAGATTGAGATTGACTTTGAGACCCTGAAGCCATCTACAC 1993
Query 1994 TGCGTGAGCTGGAGCGCTATGTCACCTCCTGTTTGCGGAAGAAAAGGAAACCTCAAGCTGAGAAAGTTGATGTG 2067
|.||.|||.|||||||.||||||||||||||||||||||||||||||||||||||||||||.||||||||.|||
Sbjct 1994 TACGAGAGTTGGAGCGATATGTCACCTCCTGTTTGCGGAAGAAAAGGAAACCTCAAGCTGAAAAAGTTGACGTG 2067
Query 2068 ATTGCCGGCTCCTCCAAGATGAAGGGCTTCTCGTCCTCAGAGTCGGAGAGCTCCAGTGAGTCCAGCTCCTCTGA 2141
|||||.||.||.||||||||||||||.|||||.|||||.||||||||||||.||||.||.||||||||||||||
Sbjct 2068 ATTGCTGGTTCTTCCAAGATGAAGGGATTCTCATCCTCTGAGTCGGAGAGCACCAGCGAATCCAGCTCCTCTGA 2141
Query 2142 CAGCGAAGACTCCGAAACA-----GGTCCTGCC----------------------------------------- 2169
|||.||||||||.|||||| || ||.||
Sbjct 2142 CAGTGAAGACTCTGAAACAGAGATGG--CTCCCAAGTCAAAAAAGAAGGGGCACACTGGGAGGGACCAGAAAAA 2213
Query 2170 -------------------------------------------------------------------------- 2169
Sbjct 2214 GCATCATCACCATCACCATCCACAGATGCAGCCAGCCCCAGCTCCTGTGCCCCAGCAGCCGCCCCCACCTCCAC 2287
Query 2170 -------------------------------------------------------------------------- 2169
Sbjct 2288 AGCAGCCTCCTCCACCCCCACCTCCGCAGCAGCAGCAGCAGCAACCTCCACCCCCACCACCTCCGCCCTCCATG 2361
Query 2170 -------------------------------------------------------------------------- 2169
Sbjct 2362 CCACAGCAGACTGCCCCAGCGATGAAGTCCTCGCCCCCACCCTTCATCACTGCCCAGGTCCCCGTCCTGGAACC 2435
Query 2170 -------------------------------------------------------------------------- 2169
Sbjct 2436 ACAGCTGCCAGGCAGTGTCTTTGACCCTATTGGCCACTTCACCCAGCCCATCTTGCACCTGCCGCAGCCGGAGC 2509
Query 2170 -------------------------------------------------------------------------- 2169
Sbjct 2510 TGCCTCCTCACCTGCCCCAGCCACCTGAGCACAGCACTCCACCCCATCTCAACCAGCATGCTGTGGTCTCTCCT 2583
Query 2170 -------------------------------------------------------------------------- 2169
Sbjct 2584 CCAGCTTTGCACAATGCGCTGCCCCAACAGCCATCTCGGCCCAGTAACCGAGCTGCTGCTCTGCCCCCAAAGCC 2657
Query 2170 -------------------------------------------------------------------------- 2169
Sbjct 2658 TACCCGACCCCCAGCTGTGTCCCCTGCCCTGGCCCAGCCCCCCCTGCTCCCACAACCACCAATGGCTCAGCCCC 2731
Query 2170 -------------------------------------------------------------------------- 2169
Sbjct 2732 CCCAAGTGCTGCTGGAGGATGAAGAGCCACCTGCCCCACCCCTCACCTCCATGCAGATGCAGTTGTACCTACAG 2805
Query 2170 -------------------------------------------------------------------------- 2169
Sbjct 2806 CAGCTGCAGAAGGTGCAGCCTCCCACACCACTACTCCCTTCCGTGAAGGTGCAGTCCCAACCCCCACCGCCTTT 2879
Query 2170 -------------------------------------------------------------------------- 2169
Sbjct 2880 GCCGCCTCCACCCCACCCTTCTGTGCAGCAGCAGCAGCTCCAGCCACAGCCACCGCCACCCCCACCTCCTCAGC 2953
Query 2170 -------------------------------------------------------------------------- 2169
Sbjct 2954 CACAGCCACCACCCCAGCAACAACACCAGCCTCCACCACGACCAGTTCACTTGCCATCCATGCCCTTTTCTGCT 3027
Query 2170 -------------------------------------------------------------------------- 2169
Sbjct 3028 CATATTCAGCAGCCCCCACCACCCCCAGGACAGCAACCTACTCACCCACCCCCAGGACAGCAGCCCCCACCACC 3101
Query 2170 -------------------------------------------------------------------------- 2169
Sbjct 3102 ACAGCCTGCCAAGCCCCAGCAAGTCATCCAGCATCACCCTTCCCCCCGGCACCACAAGTCAGACCCCTACTCAG 3175
Query 2170 -------------------------------------------------------------------------- 2169
Sbjct 3176 CTGGTCATCTTCGTGAGGCTCCCTCTCCGCTTATGATACATTCCCCTCAGATGCCACAGTTCCAGAGCCTGACC 3249
Query 2170 -------------------------------------------------------------------------- 2169
Sbjct 3250 CATCAGTCTCCTCCCCAGCAAAACGTCCAGCCTAAGAAGCAGGTAAAGGGCAGGGCTGAGCCACAGCCACCAGG 3323
Query 2170 -------------------------------------------------------------------------- 2169
Sbjct 3324 GCCAGTCATGGGCCAAGGCCAGGGATGCCCACCTGCCTCACCGGCTGCCGTGCCTATGCTGTCCCAGGAGCTGC 3397
Query 2170 -------------------------------------------------------------------------- 2169
Sbjct 3398 GACCACCTTCAGTCGTCCAGCCCCAGCCCCTGGTGGTAGTAAAGGAGGAGAAGATTCACTCACCAATCATTCGC 3471
Query 2170 -------------------------------------------------------------------------- 2169
Sbjct 3472 AGCGAGCCTTTCAGCACCTCACTTCGACCAGAGCCCCCCAAGCACCCAGAGAACATCAAGGCCCCAGTCCACCT 3545
Query 2170 -------------------------------------------------------------------------- 2169
Sbjct 3546 GCCCCAGCGGCCTGAGATGAAGCCTGTAGACATAGGGAGGCCTGTGATCCGGCCTCCAGAGCAGAGTGCACCCC 3619
Query 2170 -------------------------------------------------------------------------- 2169
Sbjct 3620 CACCAGGGGCCCCTGACAAGGACAAACAGAAGCAGGAGCCAAAAACACCAGTGGCACCCAAAAAGGACCTGAAA 3693
Query 2170 -------------------------------------------------------------------------- 2169
Sbjct 3694 ATTAAGAACATGGGCTCCTGGGCCAGCCTGGTACAGAAGCATCCGACCACCCCATCCTCCACAGCCAAGTCCTC 3767
Query 2170 -------------------------------------------------------------------------- 2169
Sbjct 3768 AAGTGACAGCTTTGAGCATTTCCGCCGTGCTGCTCGGGAGAAGGAGGAGAGGGAAAAGGCCCTGAAGGCTCAGG 3841
Query 2170 -------------------------------------------------------------------------- 2169
Sbjct 3842 CTGAGCATGCAGAGAAGGAGAAGGAGCGGCTGAGGCAGGAGCGCATGAGGAGCCGAGAGGATGAAGATGCGCTG 3915
Query 2170 -------------------------------------------------------------------------- 2169
Sbjct 3916 GAACAGGCACGTCGAGCCCATGAGGAGGCACGACGGCGCCAGGAGCAGCAGCAGCAGCAGCAGCAGCAGAGACA 3989
Query 2170 -------------------------------------------------------------------------- 2169
Sbjct 3990 GGAGCAGCAGCAGCAGCAGCAGCAGGCAGCTGCTGTGGCCGCTGCCTCTGCCCCCCAGGCCCAGAGCTCCCAGC 4063
Query 2170 -------------------------------------------------------------------------- 2169
Sbjct 4064 CCCAGTCTATGCTGGACCAGCAGAGGGAGTTGGCCCGGAAACGAGAGCAGGAGCGGAGGCGCAGGGAGGCAATG 4137
Query 2170 --------------------------------------------------------------- 2169
Sbjct 4138 GCAGCTACAATTGACATGAATTTCCAGAGTGATCTTTTGTCAATATTTGAAGAAAATCTTTTT 4200
