Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15013
- Subject:
- XM_006524693.2
- Aligned Length:
- 4207
- Identities:
- 1518
- Gaps:
- 2489
Alignment
Query 1 ATGTCTGCGGAGAGCGGCCCTGGGACGAGATTGAGAAATCTGCCAGTAATGGGGGATGGACTAGAAACTTCCCA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 AATGTCTACAACACAGGCCCAGGCCCAACCCCAGCCAGCCAACGCAGCCAGCACCAACCCCCCGCCCCCAGAGA 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 CCTCCAACCCTAACAAGCCCAAGAGGCAGACCAACCAACTGCAATACCTGCTCAGAGTGGTGCTCAAGACACTA 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 TGGAAACACCAGTTTGCATGGCCTTTCCAGCAGCCTGTGGATGCCGTCAAGCTGAACCTCCCTGATTACTATAA 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 GATCATTAAAACGCCTATGGATATGGGAACAATAAAGAAGCGCTTGGAAAACAACTATTACTGGAATGCTCAGG 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 AATGTATCCAGGACTTCAACACTATGTTTACAAATTGTTACATCTACAACAAGCCTGGAGATGACATAGTCTTA 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 ATGGCAGAAGCTCTGGAAAAGCTCTTCTTGCAAAAAATAAATGAGCTACCCACAGAAGAAACCGAGATCATGAT 518
|||||||||||||||||.||||||||||||||||||||.|||||.||.||.|||||||||||.|||||||||||
Sbjct 1 ATGGCAGAAGCTCTGGAGAAGCTCTTCTTGCAAAAAATCAATGAACTGCCTACAGAAGAAACTGAGATCATGAT 74
Query 519 AGTCCAGGCAAAAGGAAGAGGACGTGGGAGGAAAGAAACAGGGACAGCAAAACCTGGCGTTTCCACGGTACCAA 592
||||||||||||||||||||||||.||||||||||||||||||.|||||||.|||||.||.|||||||||||||
Sbjct 75 AGTCCAGGCAAAAGGAAGAGGACGAGGGAGGAAAGAAACAGGGGCAGCAAAGCCTGGTGTATCCACGGTACCAA 148
Query 593 ACACAACTCAAGCATCGACTCCTCCGCAGACCCAGACCCCTCAGCCGAA---TCCTCCTCCTGTGCAGGCCACG 663
||||||||||||||||.|||.||||||||||||||||.|||||||.||| ||||||.||||||||||||||.
Sbjct 149 ACACAACTCAAGCATCAACTTCTCCGCAGACCCAGACGCCTCAGCAGAACCCTCCTCCACCTGTGCAGGCCACA 222
Query 664 CCTCACCCCTTCCCTGCCGTCACCCCGGACCTCATCGTCCAGACCCCTGTCATGACAGTGGTGCCTCCCCAGCC 737
.||||||||||.|||||.||||||||.||||||||.|.||||.|.||||||||||||.|||||||.||.|||||
Sbjct 223 ACTCACCCCTTTCCTGCTGTCACCCCAGACCTCATTGCCCAGCCTCCTGTCATGACAATGGTGCCCCCTCAGCC 296
Query 738 ACTGCAGACGCC--CCCCGCCAGTGCCCCCCCAGCCACAACCCCAACCCGCTTCAGCTCCCCAGCCCGTACAGA 809
|||.|||||.|| |.||| ||.|||||||||||||.|||||.|||.|||.|||.|||.|||||.||.||||
Sbjct 297 ACTTCAGACTCCTTCACCG---GTACCCCCCCAGCCACCACCCCCACCTGCTCCAGTTCCACAGCCTGTGCAGA 367
Query 810 GCCACCCACCCATCATCGCGGCCACCCCACAGCCTGTGAAGACAAAGAAGGGAGTGAAGAGGAAAGCAGACACC 883
|.|||||.||||||||.|||.|||||||.||||||||||||||||||||.||.|||||||||||||||||.|||
Sbjct 368 GTCACCCGCCCATCATTGCGACCACCCCCCAGCCTGTGAAGACAAAGAAAGGGGTGAAGAGGAAAGCAGATACC 441
Query 884 ACCACCCCCACCACCATTGACCCCATTCACGAGCCACCCTCGCTGCCCCCGGAGCCCAAGACCACCAAGCTGGG 957
||||||||.||||||||.|||||||||||.|||||||||||.|||.||||.||||||||||||.||||||||||
Sbjct 442 ACCACCCCTACCACCATCGACCCCATTCATGAGCCACCCTCACTGGCCCCAGAGCCCAAGACCGCCAAGCTGGG 515
Query 958 CCAGCGGCGGGAGAGCAGCCGGCCTGTGAAACCTCCAAAGAAGGACGTGCCCGACTCTCAGCAGCACCCAGCAC 1031
.|..|||||||||||||||.|.||||||||.||||||||||||||.||.||.|||||.|||||||||||||..|
Sbjct 516 TCCTCGGCGGGAGAGCAGCAGACCTGTGAAGCCTCCAAAGAAGGATGTACCGGACTCACAGCAGCACCCAGGGC 589
Query 1032 CAGAGAAGAGCAGCAAGGTCTCGGAGCAGCTCAAGTGCTGCAGCGGCATCCTCAAGGAGATGTTTGCCAAGAAG 1105
|||||||||||||||||.||||.||||||||.|||||||||||.|||||||||||||||||||||||||||||.
Sbjct 590 CAGAGAAGAGCAGCAAGATCTCTGAGCAGCTAAAGTGCTGCAGTGGCATCCTCAAGGAGATGTTTGCCAAGAAA 663
Query 1106 CACGCCGCCTACGCCTGGCCCTTCTACAAGCCTGTGGACGTGGAGGCACTGGGCCTACACGACTACTGTGACAT 1179
||.||.|||||.||||||||.|||||||||||||||||.||||||||||||||.||.|||||||||||||||||
Sbjct 664 CATGCTGCCTATGCCTGGCCTTTCTACAAGCCTGTGGATGTGGAGGCACTGGGTCTGCACGACTACTGTGACAT 737
Query 1180 CATCAAGCACCCCATGGACATGAGCACAATCAAGTCTAAACTGGAGGCCCGTGAGTACCGTGATGCTCAGGAGT 1253
||||||.||.||||||||||||||||||||||||||||||||.|||.||||.||||||.|.|||||.|||||.|
Sbjct 738 CATCAAACATCCCATGGACATGAGCACAATCAAGTCTAAACTAGAGTCCCGAGAGTACAGAGATGCCCAGGAAT 811
Query 1254 TTGGTGCTGACGTCCGATTGATGTTCTCCAACTGCTATAAGTACAACCCTCCTGACCATGAGGTGGTGGCCATG 1327
||||||||||.||||||||||||||||||||||||||.|||||||||||.|||||||||||.|||||.||||||
Sbjct 812 TTGGTGCTGATGTCCGATTGATGTTCTCCAACTGCTACAAGTACAACCCCCCTGACCATGAAGTGGTAGCCATG 885
Query 1328 GCCCGCAAGCTCCAGGATGTGTTCGAAATGCGCTTTGCCAAGATGCCGGACGAGCCTGAGGAGCCAGTGGTGGC 1401
||.||.||.||||||||||||||.|||||||||||||||||||||||.||.||||||||.||||||||.||..|
Sbjct 886 GCTCGAAAACTCCAGGATGTGTTTGAAATGCGCTTTGCCAAGATGCCTGATGAGCCTGAAGAGCCAGTTGTTAC 959
Query 1402 CGTGTCCTCCCCCGGCAGTGCTCCCTCCCACCAAGGTTGTGGCCCCGCCCTCATCCCAGCGACAGCAGCAGCGA 1475
.||||||| |.||.|||||||..||.||.||.|||||.||.|||||.||||||| |.||.||||||||||||||
Sbjct 960 AGTGTCCT-CTCCTGCAGTGCCACCCCCTACAAAGGTGGTAGCCCCACCCTCAT-CTAGTGACAGCAGCAGCGA 1031
Query 1476 TAGCTCCTCGGACAGTGACAGTTCGACTGATGACTCTGAGGAGGAGCGAGCCCAGCGGCTGGCTGAGCTCCAGG 1549
.||.||.||.|||||.||||||||.|||||.|||||||||||.|||||||||||||||||||||||.|||||||
Sbjct 1032 CAGTTCTTCCGACAGCGACAGTTCCACTGACGACTCTGAGGAAGAGCGAGCCCAGCGGCTGGCTGAACTCCAGG 1105
Query 1550 AGCAGCTCAAAGCCGTGCACGAGCAGCTTGCAGCCCTCTCTCAGCCCCAGCAGAACAAACCAAAGAAAAAGGAG 1623
|.||||||||.||||||||.||||||||||||||||||||.|||||||||||||||||||||||||||||||||
Sbjct 1106 AACAGCTCAAGGCCGTGCATGAGCAGCTTGCAGCCCTCTCACAGCCCCAGCAGAACAAACCAAAGAAAAAGGAG 1179
Query 1624 AAAGACAAGAAGGAAAAGAAAAAAGAAAAGCACAAAAGGAAAGAGGAAGTGGAAGAGAATAAAAAAAGCAAAGC 1697
||.||||||||||||||||||||.|||||||||||||.||||||.||||||||.||.|||||||||||||||.|
Sbjct 1180 AAGGACAAGAAGGAAAAGAAAAAGGAAAAGCACAAAAAGAAAGAAGAAGTGGAGGAAAATAAAAAAAGCAAAAC 1253
Query 1698 CAAGGAACCTCCTCCTAAAAAGACGAAGAAAAATAATAGCAGCAACAGCAATGTGAGCAAGAAGGAGCCAGCGC 1771
||||||||.||||||.||||||||.|||||||||||.|||||||||||||||||||||||||||||.||||..|
Sbjct 1254 CAAGGAACTTCCTCCCAAAAAGACAAAGAAAAATAACAGCAGCAACAGCAATGTGAGCAAGAAGGAACCAGTAC 1327
Query 1772 CCATGAAGAGCAAGCCCCCTCCCACGTATGAGTCGGAGGAAGAGGACAAGTGCAAGCCTATGTCCTATGAGGAG 1845
|||.|||||.||||||.||||||||.|||||.||.||.||.|||||.|||||.|||||.|||||.|||||||||
Sbjct 1328 CCACGAAGACCAAGCCGCCTCCCACATATGAATCAGAAGAGGAGGATAAGTGTAAGCCCATGTCTTATGAGGAG 1401
Query 1846 AAGCGGCAGCTCAGCTTGGACATCAACAAGCTCCCCGGCGAGAAGCTGGGCCGCGTGGTGCACATCATCCAGTC 1919
|||||||||||.||..|.||.||||||||.||.||.||.||||||||.|||||.||.||.|||||.||.|||||
Sbjct 1402 AAGCGGCAGCTAAGTCTAGATATCAACAAACTTCCTGGTGAGAAGCTAGGCCGTGTAGTACACATAATTCAGTC 1475
Query 1920 ACGGGAGCCCTCCCTGAAGAATTCCAACCCCGACGAGATTGAAATCGACTTTGAGACCCTGAAGCCGTCCACAC 1993
|.||||.||.||.||.||.||.|||||||||||.||||||||.||.||||||||||||||||||||.||.||||
Sbjct 1476 AAGGGAACCATCACTTAAAAACTCCAACCCCGATGAGATTGAGATTGACTTTGAGACCCTGAAGCCATCTACAC 1549
Query 1994 TGCGTGAGCTGGAGCGCTATGTCACCTCCTGTTTGCGGAAGAAAAGGAAACCTCAAGCTGAGAAAGTTGATGTG 2067
|.||.|||.|||||||.||||||||||||||||||||||||||||||||||||||||||||.||||||||.|||
Sbjct 1550 TACGAGAGTTGGAGCGATATGTCACCTCCTGTTTGCGGAAGAAAAGGAAACCTCAAGCTGAAAAAGTTGACGTG 1623
Query 2068 ATTGCCGGCTCCTCCAAGATGAAGGGCTTCTCGTCCTCAGAGTCGGAGAGCTCCAGTGAGTCCAGCTCCTCTGA 2141
|||||.||.||.||||||||||||||.|||||.|||||.||||||||||||.||||.||.||||||||||||||
Sbjct 1624 ATTGCTGGTTCTTCCAAGATGAAGGGATTCTCATCCTCTGAGTCGGAGAGCACCAGCGAATCCAGCTCCTCTGA 1697
Query 2142 CAGCGAAGACTCCGAAACA-----GGTCCTGCC----------------------------------------- 2169
|||.||||||||.|||||| || ||.||
Sbjct 1698 CAGTGAAGACTCTGAAACAGAGATGG--CTCCCAAGTCAAAAAAGAAGGGGCACACTGGGAGGGACCAGAAAAA 1769
Query 2170 -------------------------------------------------------------------------- 2169
Sbjct 1770 GCATCATCACCATCACCATCCACAGATGCAGCCAGCCCCAGCTCCTGTGCCCCAGCAGCCGCCCCCACCTCCAC 1843
Query 2170 -------------------------------------------------------------------------- 2169
Sbjct 1844 AGCAGCCTCCTCCACCCCCACCTCCGCAGCAGCAGCAGCAGCAACCTCCACCCCCACCACCTCCGCCCTCCATG 1917
Query 2170 -------------------------------------------------------------------------- 2169
Sbjct 1918 CCACAGCAGACTGCCCCAGCGATGAAGTCCTCGCCCCCACCCTTCATCACTGCCCAGGTCCCCGTCCTGGAACC 1991
Query 2170 -------------------------------------------------------------------------- 2169
Sbjct 1992 ACAGCTGCCAGGCAGTGTCTTTGACCCTATTGGCCACTTCACCCAGCCCATCTTGCACCTGCCGCAGCCGGAGC 2065
Query 2170 -------------------------------------------------------------------------- 2169
Sbjct 2066 TGCCTCCTCACCTGCCCCAGCCACCTGAGCACAGCACTCCACCCCATCTCAACCAGCATGCTGTGGTCTCTCCT 2139
Query 2170 -------------------------------------------------------------------------- 2169
Sbjct 2140 CCAGCTTTGCACAATGCGCTGCCCCAACAGCCATCTCGGCCCAGTAACCGAGCTGCTGCTCTGCCCCCAAAGCC 2213
Query 2170 -------------------------------------------------------------------------- 2169
Sbjct 2214 TACCCGACCCCCAGCTGTGTCCCCTGCCCTGGCCCAGCCCCCCCTGCTCCCACAACCACCAATGGCTCAGCCCC 2287
Query 2170 -------------------------------------------------------------------------- 2169
Sbjct 2288 CCCAAGTGCTGCTGGAGGATGAAGAGCCACCTGCCCCACCCCTCACCTCCATGCAGATGCAGTTGTACCTACAG 2361
Query 2170 -------------------------------------------------------------------------- 2169
Sbjct 2362 CAGCTGCAGAAGGTGCAGCCTCCCACACCACTACTCCCTTCCGTGAAGGTGCAGTCCCAACCCCCACCGCCTTT 2435
Query 2170 -------------------------------------------------------------------------- 2169
Sbjct 2436 GCCGCCTCCACCCCACCCTTCTGTGCAGCAGCAGCAGCTCCAGCCACAGCCACCGCCACCCCCACCTCCTCAGC 2509
Query 2170 -------------------------------------------------------------------------- 2169
Sbjct 2510 CACAGCCACCACCCCAGCAACAACACCAGCCTCCACCACGACCAGTTCACTTGCCATCCATGCCCTTTTCTGCT 2583
Query 2170 -------------------------------------------------------------------------- 2169
Sbjct 2584 CATATTCAGCAGCCCCCACCACCCCCAGGACAGCAACCTACTCACCCACCCCCAGGACAGCAGCCCCCACCACC 2657
Query 2170 -------------------------------------------------------------------------- 2169
Sbjct 2658 ACAGCCTGCCAAGCCCCAGCAAGTCATCCAGCATCACCCTTCCCCCCGGCACCACAAGTCAGACCCCTACTCAG 2731
Query 2170 -------------------------------------------------------------------------- 2169
Sbjct 2732 CTGGTCATCTTCGTGAGGCTCCCTCTCCGCTTATGATACATTCCCCTCAGATGCCACAGTTCCAGAGCCTGACC 2805
Query 2170 -------------------------------------------------------------------------- 2169
Sbjct 2806 CATCAGTCTCCTCCCCAGCAAAACGTCCAGCCTAAGAAGCAGGTAAAGGGCAGGGCTGAGCCACAGCCACCAGG 2879
Query 2170 -------------------------------------------------------------------------- 2169
Sbjct 2880 GCCAGTCATGGGCCAAGGCCAGGGATGCCCACCTGCCTCACCGGCTGCCGTGCCTATGCTGTCCCAGGAGCTGC 2953
Query 2170 -------------------------------------------------------------------------- 2169
Sbjct 2954 GACCACCTTCAGTCGTCCAGCCCCAGCCCCTGGTGGTAGTAAAGGAGGAGAAGATTCACTCACCAATCATTCGC 3027
Query 2170 -------------------------------------------------------------------------- 2169
Sbjct 3028 AGCGAGCCTTTCAGCACCTCACTTCGACCAGAGCCCCCCAAGCACCCAGAGAACATCAAGGCCCCAGTCCACCT 3101
Query 2170 -------------------------------------------------------------------------- 2169
Sbjct 3102 GCCCCAGCGGCCTGAGATGAAGCCTGTAGACATAGGGAGGCCTGTGATCCGGCCTCCAGAGCAGAGTGCACCCC 3175
Query 2170 -------------------------------------------------------------------------- 2169
Sbjct 3176 CACCAGGGGCCCCTGACAAGGACAAACAGAAGCAGGAGCCAAAAACACCAGTGGCACCCAAAAAGGACCTGAAA 3249
Query 2170 -------------------------------------------------------------------------- 2169
Sbjct 3250 ATTAAGAACATGGGCTCCTGGGCCAGCCTGGTACAGAAGCATCCGACCACCCCATCCTCCACAGCCAAGTCCTC 3323
Query 2170 -------------------------------------------------------------------------- 2169
Sbjct 3324 AAGTGACAGCTTTGAGCATTTCCGCCGTGCTGCTCGGGAGAAGGAGGAGAGGGAAAAGGCCCTGAAGGCTCAGG 3397
Query 2170 -------------------------------------------------------------------------- 2169
Sbjct 3398 CTGAGCATGCAGAGAAGGAGAAGGAGCGGCTGAGGCAGGAGCGCATGAGGAGCCGAGAGGATGAAGATGCGCTG 3471
Query 2170 -------------------------------------------------------------------------- 2169
Sbjct 3472 GAACAGGCACGTCGAGCCCATGAGGAGGCACGACGGCGCCAGGAGCAGCAGCAGCAGCAGCAGCAGCAGAGACA 3545
Query 2170 -------------------------------------------------------------------------- 2169
Sbjct 3546 GGAGCAGCAGCAGCAGCAGCAGCAGGCAGCTGCTGTGGCCGCTGCCTCTGCCCCCCAGGCCCAGAGCTCCCAGC 3619
Query 2170 -------------------------------------------------------------------------- 2169
Sbjct 3620 CCCAGTCTATGCTGGACCAGCAGAGGGAGTTGGCCCGGAAACGAGAGCAGGAGCGGAGGCGCAGGGAGGCAATG 3693
Query 2170 --------------------------------------------------------------- 2169
Sbjct 3694 GCAGCTACAATTGACATGAATTTCCAGAGTGATCTTTTGTCAATATTTGAAGAAAATCTTTTT 3756
