Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15020
- Subject:
- XM_017028704.2
- Aligned Length:
- 5515
- Identities:
- 1406
- Gaps:
- 4106
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCACTGCAGCTCTGGGCCCTGACCCTGCTGGGCCTGCTGGGCGCAGGTGCCAGCCTGAGGCCCCGCAAGCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGACTTCTTCCGCAGCGAGAAAGAGCTGAACCACCTGGCTGTGGATGAGGCCTCAGGCGTGGTGTACCTGGGGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CGGTGAATGCCCTCTACCAGCTGGATGCGAAGCTGCAGCTGGAGCAGCAGGTGGCCACGGGCCCGGCCCTGGAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AACAAGAAGTGCACGCCGCCCATCGAGGCCAGCCAGTGCCATGAGGCTGAGATGACTGACAATGTCAACCAGCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCTGCTGCTCGACCCTCCCAGGAAGCGCCTGGTGGAGTGCGGCAGCCTCTTCAAGGGCATCTGCGCTCTGCGCG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CCCTGAGCAACATCTCCCTCCGCCTGTTCTACGAGGACGGCAGCGGGGAGAAGTCTTTCGTGGCCAGCAATGAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GAGGGCGTGGCCACAGTGGGGCTGGTGAGCTCCACGGGTCCTGGTGGTGACCGCGTGCTGTTTGTGGGCAAAGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CAATGGGCCACACGACAACGGCATCATCGTGAGCACTCGGCTGTTGGACCGGACTGACAGCAGGGAGGCCTTTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AAGCCTACACGGACCACGCCACCTACAAGGCCGGCTACCTGTCCACCAACACACAGCAGTTCGTGGCGGCCTTC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GAGGACGGCCCCTACGTCTTCTTTGTCTTCAACCAGCAGGACAAGCACCCGGCCCGGAACCGCACGCTGCTGGC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ACGCATGTGCAGAGAAGACCCCAACTACTACTCCTACCTGGAGATGGACCTGCAGTGCCGGGACCCCGACATCC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ACGCCGCTGCCTTTGGCACCTGCCTGGCCGCCTCCGTGGCTGCGCCTGGCTCTGGCAGGGTGCTATATGCTGTC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TTCAGCAGAGACAGCCGGAGCAGTGGGGGGCCCGGTGCGGGCCTCTGCCTGTTCCCGCTGGACAAGGTGCACGC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CAAGATGGAGGCCAACCGCAACGCCTGTTACACAGGCACCCGGGAGGCCCGTGACATCTTCTACAAGCCCTTCC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ACGGCGATATCCAGTGCGGCGGCCACGCGCCGGGCTCCAGCAAGAGCTTCCCATGTGGCTCGGAGCACCTGCCC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TACCCGCTGGGCAGCCGCGACGGGCTCAGAGGCACAGCCGTGCTGCAGCGTGGAGGCCTGAACCTCACGGCCGT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GACGGTCGCCGCCGAGAACAACCACACTGTTGCTTTTCTGGGCACCTCTGATGGCCGGATCCTCAAGGTGTACC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TCACCCCAGATGGCACCTCCTCAGAGTACGACTCTATCCTTGTGGAGATAAACAAGAGAGTCAAGCGCGACCTG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GTACTGTCTGGAGACCTGGGCAGCCTGTACGCCATGACCCAGGACAAGGTGTTCCGGCTGCCGGTGCAGGAGTG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CCTGAGCTACCCGACCTGCACCCAGTGCCGCGACTCCCAGGACCCCTACTGCGGCTGGTGCGTCGTCGAGGGAC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GATGCACCCGGAAGGCCGAGTGTCCGCGGGCCGAGGAGGCCAGCCACTGGCTGTGGAGCCGAAGCAAGTCCTGC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GTGGCCGTCACCAGCGCCCAGCCACAGAACATGAGCCGGCGGGCCCAGGGGGAGGTGCAGCTGACCGTCAGCCC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CCTCCCTGCCCTGAGCGAGGAGGACGAGTTGCTGTGCCTTTTTGGGGAGTCGCCGCCACACCCCGCCCGCGTGG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AGGGCGAGGCCGTCATCTGCAACTCCCCAAGCAGCATCCCCGTCACACCGCCAGGCCAGGACCACGTGGCCGTG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 ACCATCCAGCTCCTCCTTAGACGAGGCAACATCTTCCTCACGTCCTACCAGTACCCCTTCTACGACTGCCGCCA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GGCCATGAGCCTGGAGGAGAACCTGCCGTGCATCTCCTGCGTGAGCAACCGCTGGACCTGCCAGTGGGACCTGC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GCTACCACGAGTGCCGGGAGGCTTCGCCCAACCCTGAGGACGGCATCGTCCGTGCCCACATGGAGGACAGCTGT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CCCCAGTTCCTGGGACCCAGCCCCCTGGTGATCCCCATGAACCACGAGACAGATGTGAACTTCCAGGGCAAGAA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CCTGGACACCGTGAAGGGTTCCTCCCTGCACGTGGGCAGTGACTTGCTCAAGTTCATGGAGCCGGTGACCATGC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 AGGAATCTGGGACCTTCGCCTTTCGGACCCCAAAGCTGTCCCACGATGCCAACGAGACGCTGCCCCTGCACCTC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TACGTCAAGTCTTACGGCAAGAATATCGACAGCAAGCTCCATGTGACCCTCTACAACTGCTCCTTTGGCCGCAG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 CGACTGCAGCCTGTGCCGGGCCGCTAACCCCGACTACAGGTGTGCGTGGTGCGGGGGCCAGAGCAGGTGCGTGT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 ATGAGGCCCTGTGCAACACCACCTCCGAGTGCCCGCCGCCCGTCATCACCAGGATCCAGCCTGAGACGGGCCCC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CTGGGTGGGGGCATCCGCATCACCATCCTGGGGTCCAATTTGGGCGTCCAAGCAGGGGACATCCAGAGGATCTC 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TGTGGCCGGCCGGAACTGCTCCTTTCAGCCGGAACGTTACTCCGTGTCCACCCGGATCGTGTGTGTGATCGAGG 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 CTGCGGAGACGCCTTTCACGGGGGGTGTCGAGGTGGACGTCTTCGGGAAACTGGGCCGTTCGCCTCCCAATGTC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 CAGTTCACCTTCCAACAGCCCAAGCCTCTCAGTGTGGAGCCGCAGCAGGGACCGCAGGCGGGCGGCACCACACT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 GACCATCCACGGCACCCACCTGGACACGGGCTCCCAGGAGGACGTGCGGGTGACCCTCAACGGCGTCCCGTGTA 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 AAGTGACGAAGTTTGGGGCGCAGCTCCAGTGTGTCACTGGCCCCCAGGCGACACGGGGCCAGATGCTTCTGGAG 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GTCTCCTACGGGGGGTCCCCCGTGCCCAACCCCGGCATCTTCTTCACCTACCGCGAAAACCCCGTACTGCGAGC 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 CTTCGAGCCGCTACGAAGCTTTGCCAGTGGTGGCCGCAGCATCAACGTCACGGGTCAGGGCTTCAGCCTGATCC 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 AGAGGTTTGCCATGGTGGTCATCGCGGAGCCCCTGCAGTCCTGGCAGCCGCCGCGGGAGGCTGAATCCCTGCAG 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 CCCATGACGGTGGTGGGTACAGACTACGTGTTCCACAATGACACCAAGGTCGTCTTCCTGTCCCCGGCTGTGCC 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 TGAGGAGCCAGAGGCCTACAACCTCACGGTGCTGATCGAGATGGACGGGCACCGTGCCCTGCTCAGAACAGAGG 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 CCGGGGCCTTCGAGTACGTGCCTGACCCCACCTTTGAGAACTTCACAGGTGGCGTCAAGAAGCAGGTCAACAAG 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 CTCATCCACGCCCGGGGCACCAATCTGAACAAGGCGATGACGCTGCAGGAGGCCGAGGCCTTCGTGGGTGCCGA 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 GCGCTGCACCATGAAGACGCTGACGGAGACCGACCTGTACTGTGAGCCCCCGGAGGTGCAGCCCCCGCCCAAGC 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 GGCGGCAGAAACGAGACACCACACACAACCTGCCCGAGTTCATTGTGAAGTTCGGCTCTCGCGAGTGGGTGCTG 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 GGCCGCGTGGAGTACGACACACGGGTGAGCGACGTGCCGCTCAGCCTCATCTTGCCGCTGGTCATCGTGCCCAT 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 GGTGGTCGTCATCGCGGTGTCTGTCTACTGCTACTGGAGGAAGAGCCAGCAGGCCGAACGAGAGTATGAGAAGA 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 TCAAGTCCCAGCTGGAGGGCCTGGAGGAGAGCGTGCGGGACCGCTGCAAGAAGGAATTCACAGACCTGATGATC 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 GAGATGGAGGACCAGACCAACGACGTGCACGAGGCCGGCATCCCCGTGCTGGACTACAAGACCTACACCGACCG 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 CGTCTTCTTCCTGCCCTCCAAGGACGGCGACAAGGACGTGATGATCACCGGCAAGCTGGACATCCCTGAGCCGC 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 GGCGGCCGGTGGTGGAGCAGGCCCTCTACCAGTTCTCCAACCTGCTGAACAGCAAGTCTTTCCTCATCAATTTC 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 ATCCACACCCTGGAGAACCAGCGGGAGTTCTCGGCCCGCGCCAAGGTCTACTTCGCGTCCCTGCTGACGGTGGC 4070
Query 1 ----------------------------------ATGCACACGCTCTTCCTGGAGCTCCTGGAGCAGTACGTGG 40
||||||||||||||||||||||||||||||||||||||||
Sbjct 4071 GCTGCACGGGAAACTGGAGTACTACACGGACATCATGCACACGCTCTTCCTGGAGCTCCTGGAGCAGTACGTGG 4144
Query 41 TGGCCAAGAACCCCAAGCTGATGCTGCGCAGGTCTGAGACTGTGGTGGAGAGGATGCTGTCCAACTGGATGTCC 114
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4145 TGGCCAAGAACCCCAAGCTGATGCTGCGCAGGTCTGAGACTGTGGTGGAGAGGATGCTGTCCAACTGGATGTCC 4218
Query 115 ATCTGCCTGTACCAGTACCTCAAGGACAGTGCCGGGGAGCCCCTGTACAAGCTCTTCAAGGCCATCAAACATCA 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4219 ATCTGCCTGTACCAGTACCTCAAGGACAGTGCCGGGGAGCCCCTGTACAAGCTCTTCAAGGCCATCAAACATCA 4292
Query 189 GGTGGAAAAGGGCCCGGTGGATGCGGTACAGAAGAAGGCCAAGTACACTCTCAACGACACGGGGCTGCTGGGGG 262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4293 GGTGGAAAAGGGCCCGGTGGATGCGGTACAGAAGAAGGCCAAGTACACTCTCAACGACACGGGGCTGCTGGGGG 4366
Query 263 ATGATGTGGAGTACGCACCCCTGACGGTGAGCGTGATCGTGCAGGACGAGGGAGTGGACGCCATCCCGGTGAAG 336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4367 ATGATGTGGAGTACGCACCCCTGACGGTGAGCGTGATCGTGCAGGACGAGGGAGTGGACGCCATCCCGGTGAAG 4440
Query 337 GTCCTCAACTGTGACACCATCTCCCAGGTCAAGGAGAAGATCATTGACCAGGTGTACCGTGGGCAGCCCTGCTC 410
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4441 GTCCTCAACTGTGACACCATCTCCCAGGTCAAGGAGAAGATCATTGACCAGGTGTACCGTGGGCAGCCCTGCTC 4514
Query 411 CTGCTGGCCCAGGCCAGACAGCGTGGTCCTGGAGTGGCGTCCGGGCTCCACAGCGCAGATCCTGTCGGACCTGG 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4515 CTGCTGGCCCAGGCCAGACAGCGTGGTCCTGGAGTGGCGTCCGGGCTCCACAGCGCAGATCCTGTCGGACCTGG 4588
Query 485 ACCTGACGTCACAGCGGGAGGGCCGGTGGAAGCGCGTCAACACCCTTATGCACTACAATGTCCGGGATGGAGCC 558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4589 ACCTGACGTCACAGCGGGAGGGCCGGTGGAAGCGCGTCAACACCCTTATGCACTACAATGTCCGGGATGGAGCC 4662
Query 559 ACCCTCATCCTGTCCAAGGTGGGGGTCTCCCAGCAGCCGGAGGACAGCCAGCAGGACCTGCCTGGGGAGCGCCA 632
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4663 ACCCTCATCCTGTCCAAGGTGGGGGTCTCCCAGCAGCCGGAGGACAGCCAGCAGGACCTGCCTGGGGAGCGCCA 4736
Query 633 TGCCCTCCTGGAGNAGNAGAACCCGGGTGTGGCACCTGGTGCGGCCGACCGACGAGGTGGACGAGGGCAAGTCC 706
|||||||||||||.||.|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4737 TGCCCTCCTGGAGGAGGAGAA-CCGGGTGTGGCACCTGGTGCGGCCGACCGACGAGGTGGACGAGGGCAAGTCC 4809
Query 707 AAGAGAGGCAGCGTGAAAGAGAAGGAGCGGACGAAGGCCATCACCGAGATCTA-CTGACGCGGCTGCTCTCAGT 779
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 4810 AAGAGAGGCAGCGTGAAAGAGAAGGAGCGGACGAAGGCCATCACCGAGATCTACCTGACGCGGCTGCTCTCAGT 4883
Query 780 CAAGGGCACACTGCAGCAGTTTGTGGACAACTTCTTCCAGAGCGTGCTGGCGCCTGGGCACGCGGTGCCACCTG 853
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4884 CAAGGGCACACTGCAGCAGTTTGTGGACAACTTCTTCCAGAGCGTGCTGGCGCCTGGGCACGCGGTGCCACCTG 4957
Query 854 CAGTCAAGTACTTCTTCGACTTCCTGGACGAGCAGGCAGAGAAGCACAACATCCAGGATGAAGACACCATCCAC 927
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4958 CAGTCAAGTACTTCTTCGACTTCCTGGACGAGCAGGCAGAGAAGCACAACATCCAGGATGAAGACACCATCCAC 5031
Query 928 ATCTGGAAGACGAACAGTTTACCGCTCCGGTTCTGGGTGAACATCCTCAAGAACCCCCACTTCATCTTTGACGT 1001
|||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5032 ATCTGGAAGACGAACAGCTTACCGCTCCGGTTCTGGGTGAACATCCTCAAGAACCCCCACTTCATCTTTGACGT 5105
Query 1002 GCATGTCCACGAGGTGGTGGACGCCTCGCTGTCAGTCATCGCGCAGACCTTCATGGATGCCTGCACGCGCACGG 1075
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5106 GCATGTCCACGAGGTGGTGGACGCCTCGCTGTCAGTCATCGCGCAGACCTTCATGGATGCCTGCACGCGCACGG 5179
Query 1076 AGCATAAGCTGAGCCGCGATTCTCCCAGCAACAAGCTGCTGTACGCCAAGGAGATCTCCACCTACAAGAAGATG 1149
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5180 AGCATAAGCTGAGCCGCGATTCTCCCAGCAACAAGCTGCTGTACGCCAAGGAGATCTCCACCTACAAGAAGATG 5253
Query 1150 GTGGAGGATTACTACAAGGGGATCCGGCAGATGGTGCAGGTCAGCGACCAGGACATGAACACACACCTGGCAGA 1223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5254 GTGGAGGATTACTACAAGGGGATCCGGCAGATGGTGCAGGTCAGCGACCAGGACATGAACACACACCTGGCAGA 5327
Query 1224 GATTTCCCGGGCGCACACGGACTCCTTGAACACCCTCGTGGCACTCCACCAGCTCTACCAATACACGCAGAAGT 1297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5328 GATTTCCCGGGCGCACACGGACTCCTTGAACACCCTCGTGGCACTCCACCAGCTCTACCAATACACGCAGAAGT 5401
Query 1298 ACTATGACGAGATCATCAATGCCTTGGAGGAGGATCCTGCCGCCCAGAAGATGCAGCTGGCCTTCCGCCTGCAG 1371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5402 ACTATGACGAGATCATCAATGCCTTGGAGGAGGATCCTGCCGCCCAGAAGATGCAGCTGGCCTTCCGCCTGCAG 5475
Query 1372 CAGATTGCCGCTGCACTGGAGAACAAGGTCACTGACCTC 1410
|||||||||||||||||||||||||||||||||||||||
Sbjct 5476 CAGATTGCCGCTGCACTGGAGAACAAGGTCACTGACCTC 5514
